Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi11g01052 ATGCTTTTTAAATATCATTCATTAAAACTCTGTTCCTATATTCTAACCTCAAACTTTCCGCTCCCATCTTCCCCTTTCTTCAAAAAAATGACTTCATCTTCTTCCTTAGAACAGCCCCTGATTCCCCTGCCTCTCAAACCCATCCCCGGCAGCTATGGCCTCCCCATTTTCGGACCCATCAAAGATCGCTACGATTACTTCTACATCCAAGGCAGAGAAAGCTTCTTTCGAACTCGAATGGCTAAATATAACTCCACTGTCTTCCGAGCCAACATGCCGCCGGGCCCCTTCGTCTCTTCCAATTCCAGAGTCATCGTCCTTCTCGACGCCCGCAGTTTTCCCATCCTCTTCGACACAACTAAAGTCGAGAAACGCAACGTTCTCGACGGAACTTACATGCCCTCCCTCGCCTTCACCGGCGGAATTCGTGCCTGCGCCTTCTTGGACCCCTCCGAAACAGAGCACTCTGTTCTCAAAGGCCACTTCCTCAAATTTCTCGCCTCTCGTCACCACCAATTCATTCCTCTATTTCGAAGCTCCGTGTCGGAGATGTTCGATAAGCTCGAAAAGGAATTGGAAAAGAACAACGTCGCGGATTTCAACCCCGTCAGTGATTCGGCCTCGTTCGATTTCGTTTTCCGATTGCTTTCTGATGGGAGCCCCGATAAGAATTTGAACTCCGAAGGACCGGGTTTGGTAGATCGATGGCTAACTTTGCAGCTCGCTCCTTTAGCCACCCTCGGTTTGCCCAAATTTTTCAGCTGCTTCGAAGATCTCGTCATCCATACCTTCCGTTTACCGTTTGCACTCGCCAGAAGCGCTTACAGCAAACTTTACGACTCATTTTACGAGTCGTCGGGTTCATTTCTAGACGAAGCAGAGAAGCAGGGGATAAACAGAGAGAAAGCATGTCATAATTTAGTGTTTCTAGCCGGATTCAACGCATACGCCGGAATGAAAGTGTTGTTACCGATTATACTAAACTGGGTCGGATCTGCCGGCGAGGGACTTCACCGGAAACTCGCCGGCGAAATCAGAGCCGCCGTGAAGGAAGATGGAGGACTGACATTCAGCGCCTTAGAGAAGATGAGTCTGCTGAAATCCGTCGTGTACGAGGTTCTGAGGATCGACCCGCCGGTGCCGTACCAATACGCGAAGGCGAAACAGGACATTGTGATCGAGAGCCATGATTCTGCTTTCAAGATCAAGAAAGGCGAAATGATTTTTGGGTATCAGCCGATCGCGACGAAAGATCCGAAGGTGTTTGAGAATCCGGAGGAATTTGTCGGCGACAGGTTCATGGGAGAGAAAGGGGACAAGCTTCTGAAGTATGTTTACTGGTCTAACGGCCGGGAGACGGAGGAGCCGACGGCGGAGAACAAGCAGTGTGCGGCGAGGGATCTGGTCGTGCTGGTGTCCAGAGTAGTTCTGGTGGAACTTTTCCTCCGTTACGACACGTTTGCCGTCGAGGGAACTCGCTCGTCGTTGGGTTGGTCCGTTAAGGTCAAATCGTTGACCAAAGCCAAAGCCTCATCGTAG 1539 50.29 MLFKYHSLKLCSYILTSNFPLPSSPFFKKMTSSSSLEQPLIPLPLKPIPGSYGLPIFGPIKDRYDYFYIQGRESFFRTRMAKYNSTVFRANMPPGPFVSSNSRVIVLLDARSFPILFDTTKVEKRNVLDGTYMPSLAFTGGIRACAFLDPSETEHSVLKGHFLKFLASRHHQFIPLFRSSVSEMFDKLEKELEKNNVADFNPVSDSASFDFVFRLLSDGSPDKNLNSEGPGLVDRWLTLQLAPLATLGLPKFFSCFEDLVIHTFRLPFALARSAYSKLYDSFYESSGSFLDEAEKQGINREKACHNLVFLAGFNAYAGMKVLLPIILNWVGSAGEGLHRKLAGEIRAAVKEDGGLTFSALEKMSLLKSVVYEVLRIDPPVPYQYAKAKQDIVIESHDSAFKIKKGEMIFGYQPIATKDPKVFENPEEFVGDRFMGEKGDKLLKYVYWSNGRETEEPTAENKQCAARDLVVLVSRVVLVELFLRYDTFAVEGTRSSLGWSVKVKSLTKAKASS 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 18217005 18218981 + Lsi11G010520.1 Lsi11g01052 674219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi11g01052 512 Gene3D Cytochrome P450 42 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi11g01052 512 PANTHER HYDROPEROXIDE LYASE 43 489 - -
Lsi11g01052 512 SUPERFAMILY Cytochrome P450 42 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi11g01052 512 PRINTS E-class P450 group IV signature 400 414 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi11g01052 512 PRINTS E-class P450 group IV signature 416 434 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi11g01052 512 PRINTS E-class P450 group IV signature 363 379 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi11g01052 512 Pfam Cytochrome P450 339 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi11g01052 512 PANTHER CYTOCHROME P450 26 43 489 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi11g01052 Lsi-Chr11:18217005 Lsi11g01431 Lsi-Chr11:22854898 3.65E-37 dispersed
Lsi11g01051 Lsi-Chr11:18200999 Lsi11g01052 Lsi-Chr11:18217005 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi11g01052 K01723 - csv:101211574 858.981