Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01052 | ATGCTTTTTAAATATCATTCATTAAAACTCTGTTCCTATATTCTAACCTCAAACTTTCCGCTCCCATCTTCCCCTTTCTTCAAAAAAATGACTTCATCTTCTTCCTTAGAACAGCCCCTGATTCCCCTGCCTCTCAAACCCATCCCCGGCAGCTATGGCCTCCCCATTTTCGGACCCATCAAAGATCGCTACGATTACTTCTACATCCAAGGCAGAGAAAGCTTCTTTCGAACTCGAATGGCTAAATATAACTCCACTGTCTTCCGAGCCAACATGCCGCCGGGCCCCTTCGTCTCTTCCAATTCCAGAGTCATCGTCCTTCTCGACGCCCGCAGTTTTCCCATCCTCTTCGACACAACTAAAGTCGAGAAACGCAACGTTCTCGACGGAACTTACATGCCCTCCCTCGCCTTCACCGGCGGAATTCGTGCCTGCGCCTTCTTGGACCCCTCCGAAACAGAGCACTCTGTTCTCAAAGGCCACTTCCTCAAATTTCTCGCCTCTCGTCACCACCAATTCATTCCTCTATTTCGAAGCTCCGTGTCGGAGATGTTCGATAAGCTCGAAAAGGAATTGGAAAAGAACAACGTCGCGGATTTCAACCCCGTCAGTGATTCGGCCTCGTTCGATTTCGTTTTCCGATTGCTTTCTGATGGGAGCCCCGATAAGAATTTGAACTCCGAAGGACCGGGTTTGGTAGATCGATGGCTAACTTTGCAGCTCGCTCCTTTAGCCACCCTCGGTTTGCCCAAATTTTTCAGCTGCTTCGAAGATCTCGTCATCCATACCTTCCGTTTACCGTTTGCACTCGCCAGAAGCGCTTACAGCAAACTTTACGACTCATTTTACGAGTCGTCGGGTTCATTTCTAGACGAAGCAGAGAAGCAGGGGATAAACAGAGAGAAAGCATGTCATAATTTAGTGTTTCTAGCCGGATTCAACGCATACGCCGGAATGAAAGTGTTGTTACCGATTATACTAAACTGGGTCGGATCTGCCGGCGAGGGACTTCACCGGAAACTCGCCGGCGAAATCAGAGCCGCCGTGAAGGAAGATGGAGGACTGACATTCAGCGCCTTAGAGAAGATGAGTCTGCTGAAATCCGTCGTGTACGAGGTTCTGAGGATCGACCCGCCGGTGCCGTACCAATACGCGAAGGCGAAACAGGACATTGTGATCGAGAGCCATGATTCTGCTTTCAAGATCAAGAAAGGCGAAATGATTTTTGGGTATCAGCCGATCGCGACGAAAGATCCGAAGGTGTTTGAGAATCCGGAGGAATTTGTCGGCGACAGGTTCATGGGAGAGAAAGGGGACAAGCTTCTGAAGTATGTTTACTGGTCTAACGGCCGGGAGACGGAGGAGCCGACGGCGGAGAACAAGCAGTGTGCGGCGAGGGATCTGGTCGTGCTGGTGTCCAGAGTAGTTCTGGTGGAACTTTTCCTCCGTTACGACACGTTTGCCGTCGAGGGAACTCGCTCGTCGTTGGGTTGGTCCGTTAAGGTCAAATCGTTGACCAAAGCCAAAGCCTCATCGTAG | 1539 | 50.29 | MLFKYHSLKLCSYILTSNFPLPSSPFFKKMTSSSSLEQPLIPLPLKPIPGSYGLPIFGPIKDRYDYFYIQGRESFFRTRMAKYNSTVFRANMPPGPFVSSNSRVIVLLDARSFPILFDTTKVEKRNVLDGTYMPSLAFTGGIRACAFLDPSETEHSVLKGHFLKFLASRHHQFIPLFRSSVSEMFDKLEKELEKNNVADFNPVSDSASFDFVFRLLSDGSPDKNLNSEGPGLVDRWLTLQLAPLATLGLPKFFSCFEDLVIHTFRLPFALARSAYSKLYDSFYESSGSFLDEAEKQGINREKACHNLVFLAGFNAYAGMKVLLPIILNWVGSAGEGLHRKLAGEIRAAVKEDGGLTFSALEKMSLLKSVVYEVLRIDPPVPYQYAKAKQDIVIESHDSAFKIKKGEMIFGYQPIATKDPKVFENPEEFVGDRFMGEKGDKLLKYVYWSNGRETEEPTAENKQCAARDLVVLVSRVVLVELFLRYDTFAVEGTRSSLGWSVKVKSLTKAKASS | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 18217005 | 18218981 | + | Lsi11G010520.1 | Lsi11g01052 | 674219 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01052 | 512 | Gene3D | Cytochrome P450 | 42 | 510 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g01052 | 512 | PANTHER | HYDROPEROXIDE LYASE | 43 | 489 | - | - | |
Lsi11g01052 | 512 | SUPERFAMILY | Cytochrome P450 | 42 | 493 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g01052 | 512 | PRINTS | E-class P450 group IV signature | 400 | 414 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g01052 | 512 | PRINTS | E-class P450 group IV signature | 416 | 434 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g01052 | 512 | PRINTS | E-class P450 group IV signature | 363 | 379 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g01052 | 512 | Pfam | Cytochrome P450 | 339 | 446 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g01052 | 512 | PANTHER | CYTOCHROME P450 26 | 43 | 489 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi11g01052 | Lsi-Chr11:18217005 | Lsi11g01431 | Lsi-Chr11:22854898 | 3.65E-37 | dispersed | |
Lsi11g01051 | Lsi-Chr11:18200999 | Lsi11g01052 | Lsi-Chr11:18217005 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01052 | K01723 | - | csv:101211574 | 858.981 |