Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi11g01223 ATGGTGAAGCGGCAATCGAGCAACGACGAAGGCAAATTCGAAAAATGGAGGGAAGAAGAAGACCTTGAGCAACTAGCCATGGCGAATCTCTCCAGTCTGGTTCACGAGCTTCGAGAACGTATAGCAGCTTCCTCATCCACTCCTCCTAATCGCGCCGATGACGTCGGTCTCGAAGTCCGATTTCGCGCCGTCCTTCCCAATCTCCTCCACGCTTACGTCGTTCCCTCTTCCTCAGTACATGAGAGAGAAGTAGTTGCTGTGTTGAAGCTCCTCTCGCACACTGCCAGGAACTTTCCTGGCGTTTTTTACCATGGAAAGGCTAGCGCCGTTTTGCCTGTGATTGTTCGGATATTGCCTTTTTTTGCGGAGACCGCTATCCAGGCACGACATGGAATCATTTTCGAAACCATTGGTTCCCTTTTATCCTTGCTTCGTACTGGAGCACGGGATGCATACCGTCAGTTTTTCCTCGATGCCATGTCAGTCGTTGAAGACTTGACCCATTTGTTTGTTGTAATATGCTTTTACCATCTGTCGAATTACATGAAAGGTGCTACATATGGATATTCAAAACTGTGGCCAGGGTCACGGGTTAAGTTACAGGTTGATTGCTGCTTTGCTTCAAGCTATCGCATCTTGCATGAATTATTCCATCTCTTTAGTGCAGATATTTTATACATTGCATCACTTGGCATTGATACTTCAAGCTTTGTGGAGTCCACAAGTATCAATTTGAATTGTTTCTGTGAATCTTTGAAGGGAATCTTTGAGGATCCCGATCATCTCGGGGATCTTCCAGAAATCAACAGGCCAACTAATGGCTCTGGTATTATAATAAATCTAACGGGGAAAAGGAGGTGGCGGCCTTTTGCGACTTGGATTATTAAGCTTCTAGGTAAATGCTTGGCTGAGGGGACTGTGTATGTTGAAGGGCTTATCAGTATGTCAGATGTTTCGGCAGCATGTTCATTATTATGTTATGGGGATGCTGATTTGCAAATGTCGTCTAATTTAACTTTTTGGAAGGCATGCTTTGACTTTGCACGCATTGTTGGATTGGTGATAGATGATGTCGTTCCTTATCAGCCTTTAATCCAGTCAATATCTACTATATTAAGTGAAGACAAACAGGGGCTTCCTGTATGTGTTGGGTTAAAGTGGGAAGTTGGCAATATAATGGTTGGAAAGGAGAAATTTATATTACCCGTTTTCCTTACTTCTTTCATCTATATTGGCCTCAATCCTTCTTTCAAATTAACTCCCACAGGTGGTGGCATGACATGCTCTCGGGTTGAGAAATTGTCCCCTGATAGAGTTGATTTAGTTTGCTTCTCACGACAACTAAAAGAAATCCCAGTCTTGCATTTCATGAGACGTAAGCTTCTGTTAGTTGCTGTCATCTGTGAATTAGTTAATCGTTTAAGTTTTTCTCCTGTTGGCAGAATGACTGGGAACATACCATATGATACTTCTATTGGAGGCTGTCTTAATGTGCTATACTCCAACTGTTGCGATGATGTTGTCAAGCTAACTGCTGCAGACATGGTTGGCATATTTTCACAGTCCCTGTGGAGAACCAGGAGCATGGAGCTCAAGGTTTCATTATGCAATGCATACATGCGGATTGCTAAAATCTGCCCTTCTCATATCTGGAGGCCTGAAATACTCGTTGATATGCTTTCTTTTCCAGAACCTTGCTTTGCTTTGATAGATTGCTTCAAAGCAGTTCTATCTATTCTTGGTCCTGATTATGTTGGAGGGTCTTTACCTATGGGTTTGTCAGAATTGAGCAATAAATCAAACGAAAGCTCAAGAATTGGAGAAAAGAGACTCTTTAAGGATTTGGATGTTGCCAAGAATAAACGACCAAAGATTGATGGAGAAATTGTGAGCTCTGAAGTTGATATTCTGGTTGAGTGCAAGAAGCCTTGCGTCAAAATTTGTGAAACTGAAGAAACTTATGCAAATAATTTGCATAATTTACTTGTTTCATTTGTTGGATGTTTAAAAGCTTCTTCCATCAGAGCTGATGCTCTAAGACCAGAAGTTTCATTAACAGCTCTTAGCATGCTGTGTATTGCATTCTGTCGGTACCCTGAAACTCATTTGTCCATGGTCATATTTCAGGAGATGGTTTCATGGATTCCCTGGATATACGAGCAGGTGAAGAAAGGAAGCTCAATTTCCCTCGATATCTCCATTTTTCTTGAAGGAATTCACAACATACTTCTCTTACCAACCCATGTATCTTCATGTTTATTTTCACTCTTGTCTGGAAGTAATGGGGAATATGCTGAAACTATGTCTGTGATACTTAAAGTTCCATGGACCCATTCAATCATCAGAAATGAATCTCACAAACCATCGAAGACAAAATGCATCTCTGTTCAGGTTGCATCAAAAATTACTTCTATCACTAAGACTGAAACTGATCTTGAGGTCCTGGATTTGAGTCTTGTTGATGAAGATGATGAAGTTAGAACTGAGGCTGCCATTTCAATTCCAGTGATTGCTCTATGGACTGGTTTTGACAAGCTAACACAGTTATTTAGGAGACTGGAGATCTTGAAGGGAGAAATGCATGAAAAAGTTAAAAAGATTATCCCATTTTCTCTTGGGTTTTTATCATGCCTTTATGGATCTTGCCATTCAGTAAATGGTCAAGATGTGAGTAGGTGCAAACTATTTTTAAATACGAACAGTAATAGATGCTGCCAGACAGTTGACTATGTGCTACAAGGATTTTGGTGTTCAAAGTGTGATCAGACTGTTCTGCATGATCATAAACTTTATACAAACATAATTGAGCCATCTGACTGTTACCCAAAAATGAATTTGGATAGTGATTTTGTCCATTTGATGTCGATGTTTTTTGAACTTCTTTTTGACGAGTCTTCAGAAGAGATTCAATTGTCCTGTGTGGGAACTCTTAGACGAATTCTGGTCCATGGGACTATGGATGTTCTACATCAAACGAAGAGTGGTTGGCTTAAATGTATTGAATTTTTGCTTCTTAACAGAAAAAAAGCAATAAGAGAAGCATTCTGCCTTCAAATTAGTTCCTTCCTCGAGGTTCATATCACGGGTTGCTTTTTCCCGGAAGAAGACATCTCAAACAAAAGGAAAGAGCTAATGTTTTTGGATTTGATTAAACATGCAATGGTATCGACTGCAGATCCCCAAATTCTGGACACTATACTAGAATCTGTAGCAGAGCTCATGACTGCAGTTGATATTCACAGTGAATTTTTCTCCCTTTCTCTTTTATTGTTGGTTGATCATCTTGATAATCCACATATTACAGTGAGGATGAGTGCTTCAAGATCTATCCACAAAGCTTGTCGTTTCCATTTTAATGGGAATTTTGATCTAATATTTTCAAATGTTGTCCATCTTCGGAATGAGCTGTTTGATTATGTCTCTACAAGGCTTGTTAGCCGTCCAAAAATTGTACAAGAATTTGCAGAAGCTGTTTTGGGTGTTGAAACTGAAGTACTTGTTATGAAAATGATTCCTGTTGTTCTTCCAAAGCTGATTGTCTCTCATCAGAATAACGACCAAGCTGTTGAATCTTTATATGAATTAGCTAAATGTGTGGATACAGATATGGTTACGTTGATAGTAAATTGGTTGCCAAAAGTTCTTGCCTTTGTGCTCTACCAAGCAAATGGGAAGGAGTTACGTTCTGCCTTGGAATTTTATCATGCTCATACTGGTTCAAATCAGGAAGAAATTTTTGCTGCTGCATTACCTGCACTTTTAGATGAACTAGTATGCTTTGTTGATGGTGGCGATTCAGATGTGGTCAGTAAACGGTTAGCAAGAGTTCCTGAGATGATATTACAAGTTGCTAGAGTTCTTACTGGAGGGGATGATCTCCCAGGATTTTTGAGGAATCATTTTGTTGGCCTCCTTAACAGCGTGGATAGGAAAATGCTACATGCAGAGGACGTTTGCCTGCAGAAACAAGCTCTGCAATGTATTGAAATGCTGATAAAATTGATGGGTTCTCATCTTAGTACTTATGTGCCGAAACTAATGGTTCTTCTTATGCATGCTATTGGGAAAGAAGTACTGCAAAGTGAAGGTCTCATTGTCTTGAATTCTTTTATCCAACAATTGGCTAATGTATCACCATCTAGCATCAAGTATGTGATTTCTCAAGTCTTTGCTGCACTTGTGCCTTTCCTGGAGAGAGATGAAACTTCCACACATTTAAATATGGTGGTAAAAATTTTGGAAGAGCTTGTTTTAAAAAACAAGAGTATACTAAAGGTGCATATACGTGAATTCCCTCCATTGCCTTGTATTTCTGCTTTGACAGAGGTGAACAGAGCTATACATGAAACTCGTGGGTCAATGACTCTAAAGGATCAGCTACGAGACTTTGTTGATGGTTTAAATCATGAGAACTTGAACGTGAGATACATGGTGGCATGTGAATTGAGCAAATTGTTGAACATGAGAAGCAAGGAGGTCACAGCTTTGATAAGTGCTGAAGCTGATCTAGACATGGATGTTTTGAGCTTACTAATCTCATCCTTGCTAAGAGGATGTGCTGAGGAGTCAAGGACTGCAGTGGGCCAACGGCTGAAATTGGTTTGTGCTGATTGTCTTGGAGCACTAGGTGCTGTTGATCCTGCCAAAGTGAAGAGTTTTTCATGCCAACAATTTAAAATTGAATGTTCTGACGATGATCTAATTTTCGAGTTGATCCACAAACACTTAGCTCGAGCTTTTGGAGCTGCACCAGATACCATCATTCAAGATTCAGCGGCATTAGCCATTCAAGAGCTTCTAAAAATTGCAGGGTGTAAGGCATCACTGGATGAAAATGCTGTTGTTTCAGCATCACCGTCGCTGAAAGACAAAGAAGCTTCAAAAACTGTCATATCCAATTCTTCTGATGGTGGTAATGCGATGAGTATGAGAGGTCAGAGATTGTGGGGACGTTTCTCTGATTATGTGAAAGAAATTATAGCACCTTGCTTAACCTCCAGATTTCAGCTCCCTAATGTGGCTGACTCCTCATTTGTTAGTATGTCATTTAGAAGGTGGATATTCTTTTGGATAAAAAAGCTAACTACACATGCCACTGGGTCTCGTGCTAGTATTTTTCATGCTTGTCGAGGTATAGTGCGACATGATATGCAGATAGCTTTATATCTGCTGCCTTATTTAGTTCTTAGTGCCGTCTGTCATGGTACAGAGGAAGCACGACATGGCATAGCAGAAGAGATCTTGTCTGTTCTCAATGCAGCAGCAGCAGAGAATGATGTAACTTTGATTCACGGAAATATTGGAGGGCAAAGCGATGTTTGCATTCAAGCTGTGTTTACTCTTCTTGATAATCTAGGACAGTGGGTGGACGATGTTGAACGTGGATTGTCACTTTCTCAATCTGGTCAGTCATCGTCTTCTAAGCATTTGGTAGCCAAATCGAAGGAATCAAGTTCAAATGTTCAAGTTGATCAGGAGCAACTCCTGGTTCAGTGTAGGTATGTTTCTCAGCTTTTAGATGCAATTCCAAAGATCACTCTTGCTAGGGCTTCCTTGAGCTGTCAGGCCTATGCTAGATCTTTGATGTATTTTGAGTCATATGTACGAGGAAAATCTGGTTCTTTTAATCCTGCGGCTGAGAGGAGTGGCATCTTTGAGGACGAAGATATTTCATATCTTATGGAAATATATAGTTATCTTGATGAGCCTGATGGTCTATCTGGCTTGGCATGTTTACGTAAATCCTTGAGGTTACAAGACCAACTTTTGATAAATAAAAAAGCTGGAAATTGGGCAGAAGTTTTGACTTTTTGTGAACAGGCTTTGCATATGGAACCAACTTCAGTTCAAAGGCATTCGGATGTTCTTAATTGTTTGTTAAATATGTGCCACCTTCAAGCCATGGTTACTCATGTGGATGGTTTAATTACGAGGATTCCTCAATACAAGAAAATGTGGTGCATGCAAGGAGTGCAGGCAGCTTGGAGGCTTGGCAGGTGGGACCTGATGGATGAATACCTCAAGGGAGCTGATGAAGAAGGTCTTCTCTGTAGCAGCTCTGAGAGTAATGCTTCTTTTGACATGGACGTAGCAAAAATTCTGCAGGCAATGATGAAGAAGAATCAGTTTTCAGTTTCTGAGAAAATTGCTTTATCCAAACAATCTCTGATTGCCCCTCTTGCTGCTGCTGGCATGGATTCTTACACACGTGCTTATCCATTTGTTGTGAAACTTCACCTTCTGAAAGAGCTTGAGGACTTCCATAACCTTCTTTTTAACGACTCTTTCTTGGAAAAATCATTTCATGTAGATGATCAGGAATTTTCAGAAATGATCCAAAATTGGGAGAACCGGCTGAAATTTACTCAGTCATCACTCTGGGCAAGAGAGCCACTTCTGTCCTTTCGGAGGCTGGTTTTTGGTGCTAGTGGTCTTGGTGCTCAAGTTGGGAACTGCTGGCTTCAGTATGCAAAGTTGTGTCGCTCTGCTGGTCATTATGAAACAGCAAACCGTGCAATTCTTGAAGCTCAGGCCTCTTGTGCACCTAATGTCCATATGGAGAAGGCCAAACTTTTATGGAGCACCAGGCGGTCTGATGGTGCTATCTCAGAATTGCAACAATCTCTTCTAAATATGCCTGTGGAAGTCATAGGATCTGCTGCCATGTCATCAATAACAAGCCTTTCCTTGGTTCCAATGAATCCAGCTCCTTTAATCTGTGATACTCAAGCTTTGAATGAGAATAGAGATATTGCAAAGACTCTTCTCCTATACTCGAGGTGGATACATTGCACTGGGCAAAAGCAAAAGGAAGATGTCATCAATCTTTATTCAAGAGTGAAGGAGCTACAGCCCAAGTGGGAGAAAGGATATTTTTTTATGGCTAGGTATTGTGATGAATTACTTGCAGATGCCAGGAAACGCCAGGAAGAGTGTTTTGAACAAGGTCCGAGAAAAGCCTCATCATCTTCTACTGCTATTGGCCCTTCAAATTTAAATAATGAGAAGCCCTGGTGGTCTTATGTGCCTGATGTACTCTTGTTCTATGCGAAAGGACTTCACAGGGGTCACAAGAATCTATTTCAAGCACTTCCAAGGTTGTTAACTTTGTGGTTTGACTTTGGGAGCATCTACCAAAGAGTTGGTTCATCATCCAACAAGGAGTTGAAAAGTGTTCATGGAAAGGTTCTGAGCATCATGCGAGGTTGTTTAAAGGATTTGCCAACATATCAGTGGTTGGCTGTACTGCCTCAGTTAGTTTCAAGGATTTGCCATCAGAATGAAGAAACTGTTCGATTGGTCAAACACATCATTACCTCTGTTGTCCGACAGTATCCACAGCAAGCTCTTTGGATAATGGCCGCAGTTTCAAAATCCACTGTTCCTTCAAGACGAGAGGCAGCTATGGAGATAATCCAGTCTGCAAAAAAAGATTTCAGCCAAGGAAAGAGTGGCAACAATTTATTTCTTCAGTTTGCCAGTCTAATTGATCATTTAATCAAGTTGTGCTTCCATCCTGGTCAACAAAGAGCGAGGAACATTAATATTTCTACGGAATTTAGCACATTGAAGAGAGTGATGCCATTGGAGATTATTATGCCAATTCAACAATCTCTGGTTGTTAATCTACCAACATATGATGTGAATCTCACTGATTCACTGAGGTCTGATATCTTTTCTGCCACAGAGCTTCCTACGATATCAGGAATAGCAGATGAGGCTGAGATTCTTTCATCACTTCAGCGGCCTAAGAAAATCATTCTATTGGGTAGTGATGGTATTGAGCGGCCATTCCTCTGCAAACCCAAGGATGATCTCCGGAAGGATGCTCGCATGATGGAGTTCACAGCAATGATTAACCGTTTATTATCCAAATATCCAGAAAGCCGGCGGAGGAAGCTCTACATACGCACCTTTGCTGTGATACCTCTGACAGAGGATTGTGGTATGGTAGAATGGGTTCCCCATACTCGTGGTCTTAGACATATACTGCAAGACATATATGTTACTTGTGGTAAGTTTGACAGGCAGAAGACAAATCCCCAAGTTAAGCGAATATATGATCAGTGCCAAGGTAAAATACCTGAAGGTGAGATGCTGAAGACAAAAATTCTTCCTCTGTTCCCTCCCATTTTCCACAGATGGTTTTTGAATACCTTTTCAGAACCAGCTGCTTGGTTTAGAGCGCGGATAGCTTATGCGCATACAACTGCAGTTTGGTCTATGGTTGGACATATTGTGGGGTTAGGTGATAGACATGGTGAAAATATTCTTTTTGATTCTACTACGGGTGACTGTGTCCATGTCGATTTCAGTTGTTTGTTTGACAAAGGTCTGCAGCTTGAAAAGCCTGAACTGGTGCCTTTTAGGCTAACCCAGAATTATGAGCAACCATTAATTTCTACTATTTGGCGTAGGAACAGCCAAATTATACTTGACAATTGGTTCAATATTTGTTATGCTGTTGTCCATACAGAGATTTTCATTCATAGGAGTTCACCAAAATGCTGTATTGACAAATTTAGTTGGAACATGATCGATGGATTAGGAATCACTGGTTATGAGGGCGTTTTCTTGAGAGTTTGTGAAATTACTCTTTCTGTATTGAGATGTCATCGGGATACTTTGATGAGCATACTTGAAACTTTCATTCATGATCCGCTTGTGGAGTGGACGAAATCTCACAAATCCAGTGGTGTTGAAGTTCAGAATCCACATGCTCAGCTAGCCATCAGTAACATTGAGGCTAGGTTACAAGGTGTAGTTGTTGGAGTTGGAGCTGCACCATCTTTGCCCCTGGCTGTCGAAGGTCAGGCTCGTCGATTAATTGCTGAAGCAGTCGCACACAAAAATCTTGGAAAGATGTACATATGGTGGATGCCATGGTTTTAG 8892 40.87 MVKRQSSNDEGKFEKWREEEDLEQLAMANLSSLVHELRERIAASSSTPPNRADDVGLEVRFRAVLPNLLHAYVVPSSSVHEREVVAVLKLLSHTARNFPGVFYHGKASAVLPVIVRILPFFAETAIQARHGIIFETIGSLLSLLRTGARDAYRQFFLDAMSVVEDLTHLFVVICFYHLSNYMKGATYGYSKLWPGSRVKLQVDCCFASSYRILHELFHLFSADILYIASLGIDTSSFVESTSINLNCFCESLKGIFEDPDHLGDLPEINRPTNGSGIIINLTGKRRWRPFATWIIKLLGKCLAEGTVYVEGLISMSDVSAACSLLCYGDADLQMSSNLTFWKACFDFARIVGLVIDDVVPYQPLIQSISTILSEDKQGLPVCVGLKWEVGNIMVGKEKFILPVFLTSFIYIGLNPSFKLTPTGGGMTCSRVEKLSPDRVDLVCFSRQLKEIPVLHFMRRKLLLVAVICELVNRLSFSPVGRMTGNIPYDTSIGGCLNVLYSNCCDDVVKLTAADMVGIFSQSLWRTRSMELKVSLCNAYMRIAKICPSHIWRPEILVDMLSFPEPCFALIDCFKAVLSILGPDYVGGSLPMGLSELSNKSNESSRIGEKRLFKDLDVAKNKRPKIDGEIVSSEVDILVECKKPCVKICETEETYANNLHNLLVSFVGCLKASSIRADALRPEVSLTALSMLCIAFCRYPETHLSMVIFQEMVSWIPWIYEQVKKGSSISLDISIFLEGIHNILLLPTHVSSCLFSLLSGSNGEYAETMSVILKVPWTHSIIRNESHKPSKTKCISVQVASKITSITKTETDLEVLDLSLVDEDDEVRTEAAISIPVIALWTGFDKLTQLFRRLEILKGEMHEKVKKIIPFSLGFLSCLYGSCHSVNGQDVSRCKLFLNTNSNRCCQTVDYVLQGFWCSKCDQTVLHDHKLYTNIIEPSDCYPKMNLDSDFVHLMSMFFELLFDESSEEIQLSCVGTLRRILVHGTMDVLHQTKSGWLKCIEFLLLNRKKAIREAFCLQISSFLEVHITGCFFPEEDISNKRKELMFLDLIKHAMVSTADPQILDTILESVAELMTAVDIHSEFFSLSLLLLVDHLDNPHITVRMSASRSIHKACRFHFNGNFDLIFSNVVHLRNELFDYVSTRLVSRPKIVQEFAEAVLGVETEVLVMKMIPVVLPKLIVSHQNNDQAVESLYELAKCVDTDMVTLIVNWLPKVLAFVLYQANGKELRSALEFYHAHTGSNQEEIFAAALPALLDELVCFVDGGDSDVVSKRLARVPEMILQVARVLTGGDDLPGFLRNHFVGLLNSVDRKMLHAEDVCLQKQALQCIEMLIKLMGSHLSTYVPKLMVLLMHAIGKEVLQSEGLIVLNSFIQQLANVSPSSIKYVISQVFAALVPFLERDETSTHLNMVVKILEELVLKNKSILKVHIREFPPLPCISALTEVNRAIHETRGSMTLKDQLRDFVDGLNHENLNVRYMVACELSKLLNMRSKEVTALISAEADLDMDVLSLLISSLLRGCAEESRTAVGQRLKLVCADCLGALGAVDPAKVKSFSCQQFKIECSDDDLIFELIHKHLARAFGAAPDTIIQDSAALAIQELLKIAGCKASLDENAVVSASPSLKDKEASKTVISNSSDGGNAMSMRGQRLWGRFSDYVKEIIAPCLTSRFQLPNVADSSFVSMSFRRWIFFWIKKLTTHATGSRASIFHACRGIVRHDMQIALYLLPYLVLSAVCHGTEEARHGIAEEILSVLNAAAAENDVTLIHGNIGGQSDVCIQAVFTLLDNLGQWVDDVERGLSLSQSGQSSSSKHLVAKSKESSSNVQVDQEQLLVQCRYVSQLLDAIPKITLARASLSCQAYARSLMYFESYVRGKSGSFNPAAERSGIFEDEDISYLMEIYSYLDEPDGLSGLACLRKSLRLQDQLLINKKAGNWAEVLTFCEQALHMEPTSVQRHSDVLNCLLNMCHLQAMVTHVDGLITRIPQYKKMWCMQGVQAAWRLGRWDLMDEYLKGADEEGLLCSSSESNASFDMDVAKILQAMMKKNQFSVSEKIALSKQSLIAPLAAAGMDSYTRAYPFVVKLHLLKELEDFHNLLFNDSFLEKSFHVDDQEFSEMIQNWENRLKFTQSSLWAREPLLSFRRLVFGASGLGAQVGNCWLQYAKLCRSAGHYETANRAILEAQASCAPNVHMEKAKLLWSTRRSDGAISELQQSLLNMPVEVIGSAAMSSITSLSLVPMNPAPLICDTQALNENRDIAKTLLLYSRWIHCTGQKQKEDVINLYSRVKELQPKWEKGYFFMARYCDELLADARKRQEECFEQGPRKASSSSTAIGPSNLNNEKPWWSYVPDVLLFYAKGLHRGHKNLFQALPRLLTLWFDFGSIYQRVGSSSNKELKSVHGKVLSIMRGCLKDLPTYQWLAVLPQLVSRICHQNEETVRLVKHIITSVVRQYPQQALWIMAAVSKSTVPSRREAAMEIIQSAKKDFSQGKSGNNLFLQFASLIDHLIKLCFHPGQQRARNINISTEFSTLKRVMPLEIIMPIQQSLVVNLPTYDVNLTDSLRSDIFSATELPTISGIADEAEILSSLQRPKKIILLGSDGIERPFLCKPKDDLRKDARMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRHILQDIYVTCGKFDRQKTNPQVKRIYDQCQGKIPEGEMLKTKILPLFPPIFHRWFLNTFSEPAAWFRARIAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLQLEKPELVPFRLTQNYEQPLISTIWRRNSQIILDNWFNICYAVVHTEIFIHRSSPKCCIDKFSWNMIDGLGITGYEGVFLRVCEITLSVLRCHRDTLMSILETFIHDPLVEWTKSHKSSGVEVQNPHAQLAISNIEARLQGVVVGVGAAPSLPLAVEGQARRLIAEAVAHKNLGKMYIWWMPWF 2963
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20816695 20833864 - Lsi11G012230.1 Lsi11g01223 674390

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi11g01223 2963 Pfam FAT domain 1991 2369 IPR003151 GO:0005515
Lsi11g01223 2963 Gene3D - 2710 2819 IPR036940 GO:0016301
Lsi11g01223 2963 Gene3D - 2826 2920 IPR036940 GO:0016301
Lsi11g01223 2963 ProSiteProfiles FAT domain profile. 1846 2459 IPR014009 -
Lsi11g01223 2963 SMART UME_cls 1293 1399 IPR012993 GO:0004674
Lsi11g01223 2963 CDD PIKKc_ATR 2567 2893 - -
Lsi11g01223 2963 SMART pi3k_hr1_6 2597 2952 IPR000403 -
Lsi11g01223 2963 Pfam Phosphatidylinositol 3- and 4-kinase 2597 2799 IPR000403 -
Lsi11g01223 2963 SUPERFAMILY Protein kinase-like (PK-like) 2499 2799 IPR011009 -
Lsi11g01223 2963 ProSiteProfiles FATC domain profile. 2931 2963 IPR003152 GO:0005515
Lsi11g01223 2963 SMART FATC_2 2931 2963 IPR003152 GO:0005515
Lsi11g01223 2963 Pfam UME (NUC010) domain 1296 1396 IPR012993 GO:0004674
Lsi11g01223 2963 SUPERFAMILY Protein kinase-like (PK-like) 2840 2895 IPR011009 -
Lsi11g01223 2963 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 2736 2756 IPR018936 GO:0016301
Lsi11g01223 2963 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 83 2959 - -
Lsi11g01223 2963 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 2570 2933 IPR000403 -
Lsi11g01223 2963 PANTHER SERINE/THREONINE-PROTEIN KINASE ATR 83 2959 - -
Lsi11g01223 2963 SUPERFAMILY ARM repeat 504 1732 IPR016024 -
Lsi11g01223 2963 Pfam FATC domain 2932 2963 IPR003152 GO:0005515
Lsi11g01223 2963 Gene3D - 2542 2654 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi11g01223 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] - csv:101212807 4454.43
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi06g01554 Lsi-Chr6:25902237 Lsi11g01223 Lsi-Chr11:20816695 1.61E-60 dispersed
Lsi10g00324 Lsi-Chr10:5191047 Lsi11g01223 Lsi-Chr11:20816695 3.43E-45 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g215 . . . . . Bpe12g00133 . . . . . . . . Sed04g3826 Cpe04g00609 . Bhi05g01671 Tan02g0643 Cmetu01g0717 . Hepe02g0401 . . Cla02g00402 Cam02g0407 Cec02g0407 Cco02g0423 Clacu02g0410 Cmu02g0406 Cre02g0741 . . . . . Csa07g00128 . Cme01g01220 . Blo13g00493 . . . . . Bma08g00743 . . . Cma11g01361 . Car11g01387 . . . . . . . . . . . . . . . . . Lsi11g01223 . Chy01g00655 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012534 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi11g01223 Lsi_Chr11 FPKM 0.802724 0.754436 0.0 0.0 0.0 0.0 0.0 0.0 0.144385 0.089578