Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01295 | ATGTGGGGTTTGAAAAGTAAGATTTTAGAACAAGAAGAAGGGTTTAGAGAGAGAGAATTGATGAAAGAGGTTGAAGGAAGAAGGGTTTGTCAGGAGTTTTCAGCTGGGTATTATGGTCTTTGTGCTGTTGGAGGAATGCTCAGTGCTGGGACAACCCATCTTGCTATTACACCTCTTGATGTCTTGAAGGTTAATATGCAGGTTAATCCAATCAAGTACCATGGCATTTCTTCTGGTTTTTCTACTCTTTGGAGGGAACAGGGTCCTTCATCCCTTTGGAGAGGTTGGTCGGGCAAGTTATTTGGGTACGGTGTTCAAGGCGGGTTCAAATTCGGTCTCTATGAGTACTTTAAGAAGTTTTACTCTGATTTGCTGGAAGGCCATAGGAGAAGTTCCATATACTTTCTCAGCAGTGCTTCTGCTCAAGTGTTTGCTGATATTGCTCTCTGTCCTTTTGAAGCTGTCAAGGTCAGAGTCCAGGCACAACCCTCTTACGCCAAGGGGTTGGCCGATGGATTTCCAAAGTTATACTACAGTGAAGGTCTTTCGGGTTTCTACAGAGGGCTTTTTCCACTTTGGGGACGAAATCTTCCATTCTCCATGATTATGTTCTCAACATTTGAGCATTCAGTGAACTTCATATATCAAAATATCATTCAGCGTAGAAAGGAAGATTGCTCGAGAACCCAACAGCTCGGCGTTTCATGTTTAGCTGGCTATACAGCTGGAGCTGTTGGAACTTTTGTCTCAAATCCAGCTGATAACATTGTGTCCTCTCTTTATAATAAGAAGGCTGATAATATACTGCAGGCAGTGAAGAACATAGGATTTAGCAATTTATTTATTAGAAGCCTTCCTGTCAGAATTACAATTGTTGGTCCTGTTATTACTTTGCAGTGGTTCTTCTATGACACCATTAAAGTGCTAAGTGGACTGTAA | 939 | 41.75 | MWGLKSKILEQEEGFRERELMKEVEGRRVCQEFSAGYYGLCAVGGMLSAGTTHLAITPLDVLKVNMQVNPIKYHGISSGFSTLWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKFYSDLLEGHRRSSIYFLSSASAQVFADIALCPFEAVKVRVQAQPSYAKGLADGFPKLYYSEGLSGFYRGLFPLWGRNLPFSMIMFSTFEHSVNFIYQNIIQRRKEDCSRTQQLGVSCLAGYTAGAVGTFVSNPADNIVSSLYNKKADNILQAVKNIGFSNLFIRSLPVRITIVGPVITLQWFFYDTIKVLSGL | 312 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 21591833 | 21595948 | + | Lsi11G012950.1 | Lsi11g01295 | 674462 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01295 | 312 | Pfam | Mitochondrial carrier protein | 43 | 122 | IPR018108 | - | |
Lsi11g01295 | 312 | Pfam | Mitochondrial carrier protein | 134 | 216 | IPR018108 | - | |
Lsi11g01295 | 312 | SUPERFAMILY | Mitochondrial carrier | 40 | 305 | IPR023395 | - | |
Lsi11g01295 | 312 | Gene3D | Mitochondrial carrier domain | 41 | 308 | IPR023395 | - | |
Lsi11g01295 | 312 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 129 | 213 | IPR018108 | - | |
Lsi11g01295 | 312 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 36 | 120 | IPR018108 | - | |
Lsi11g01295 | 312 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 21 | 312 | IPR044677 | GO:0005315|GO:1990547 | |
Lsi11g01295 | 312 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 230 | 309 | IPR018108 | - | |
Lsi11g01295 | 312 | PANTHER | MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL | 21 | 312 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi09g00822 | Lsi-Chr9:9426207 | Lsi11g01295 | Lsi-Chr11:21591833 | 1.85E-87 | dispersed | |
Lsi11g01295 | Lsi-Chr11:21591833 | Lsi10g01460 | Lsi-Chr10:18705393 | 1.25E-16 | dispersed | |
Lsi11g01295 | Lsi-Chr11:21591833 | Lsi03g02209 | Lsi-Chr3:33099706 | 2.44E-18 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01295 | K15102 | - | csv:101219895 | 572.778 |