Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01327 | ATGTTGTCTACATGGGAGCTCATTCCCACGACGGTCGAAAACCGGCAAATATCGTCACCAATTCTCACCATGAATTCCTCCGACCGTTTCTCGAAAGGGGTGTGGCCAGAATCAAAGAGCTTTAGTGATTATGATGATTTGGGACCAATTCCCCTTAGGAAATTAATCGGAGCAAGATATTTCAACAAAGGATATGAATCCGTCGTCGGCCCTCTCAATTCTTCGTTCAATTCGCCGAGGGACAAAGAAGGGCATGGTTCTCATACCTTGTCCACGGCGGGCGGCAACTTCGTCGTCGGAGCTAGCGTTTTCGGCTTGGGAAATGGCACCGCCAAGGGCGGATCACCAAGGGCTCGCGTGGCCGCTTACAAGGTCTGCTGGCCTCCAGCGGCCGGAAATGAGTGCTTCGATGCCGATATATTGGCGGCGTTTGATTTGGCGATCCACGACGGCGTCGACGTGTTGTCGGTGTCGCTTGGAGGAGATTCGAATCCGTTGTTTAACGATAGTGTAGCCATTGGCTCATTCCACGCCGTGAAGCATGGGATTGTGGTGATTTGCTCTGCCGGAAATTCAGGACCGGCAGCCGGTTCGGTGACCAATATTGCGCCCTGGCAGATCACCGTCGGAGCCAGCACCATGGACAGGAAGTTCCCTAGTCTTGTCGTTCTTGGGAACAAGAAGCAGATTGAGGGTGAAAGCCTGTCCCAAGAAGCTTTGCCAAGCAGGACGTTCTATCCACTCATGAGTGCTGCGGATGTTAGATTAGCCAATGCATCAGCTCATGAAGCTCAATTGTGTAAAGCTGGTACACTTGATCCTATGAAGGCCAAGGGAAAGATCCTCGTCTGCCTTCGTGGTGATAATGCAAGAGTCGACAAGGGTGAGCAAGCACTCTTGGCTGGTGCTGTGGGCATGATTCTCGCCAATAATGATCTTAGTGGGAATGAAATCCTTGCTGATCCACATCCTGATGTTACAGCTCCTGGGCTGAGTGTTATAGCTGCTTACACTGAAGCAGAAGGACCTACAAATCAAGAATATGATAATCGTCGGGTTCCTTTTAACTCAGTATCAGGAACTTCCATGTCATGCCCTCATGTTTCTGGTATTGCTGGTCTTCTCAGGACTCTTTACCCTCATTGGAGTCCTGCAGCTATAAAATCTGCCATCATGACCACAGCAAGCACTTTAGACAACAACTTCGAGCCGCTTCTCAACGCGTCCTACTCTGTAGCCACACCATTCAACTATGGAGCAGGACACGTTCATCCAAATGGTGCTACAGATCCTGGCTTGGTCTATGACATAGAGGTTAATGAATATCTGTTATTTCTATGTGCATTAGGATATAACCAAGCTCAAATATCACAATTCTCCAATGGTCCCTTCAATTGCTCGGAGCCTATTAGTCTTATGAATCTCAACTACCCTTCAATTACTGTCCCTAAGCTCTCTAGATCGATCACAATTACTCGAAGACTAAAGAATGTCGGTTCTCCTGGAATGTACAAAGCCGAGATAAGAAAACCGGCTGGGATATCAGTTTGGGTTAAGCCAAAGACGTTGAACTTCACAAGATTAGGTGAAGAGCAAAGCTTCAAAGTTTTTATGAAAGTCAAGGAACAGAATGTAGCAAAGAAGAACTATGTATATGGTGATTTGATATGGTCAGATGACGACGATGACTCTAGTTTGAGTCCTCTTTGTGCTCTTTAA | 1719 | 47.41 | MLSTWELIPTTVENRQISSPILTMNSSDRFSKGVWPESKSFSDYDDLGPIPLRKLIGARYFNKGYESVVGPLNSSFNSPRDKEGHGSHTLSTAGGNFVVGASVFGLGNGTAKGGSPRARVAAYKVCWPPAAGNECFDADILAAFDLAIHDGVDVLSVSLGGDSNPLFNDSVAIGSFHAVKHGIVVICSAGNSGPAAGSVTNIAPWQITVGASTMDRKFPSLVVLGNKKQIEGESLSQEALPSRTFYPLMSAADVRLANASAHEAQLCKAGTLDPMKAKGKILVCLRGDNARVDKGEQALLAGAVGMILANNDLSGNEILADPHPDVTAPGLSVIAAYTEAEGPTNQEYDNRRVPFNSVSGTSMSCPHVSGIAGLLRTLYPHWSPAAIKSAIMTTASTLDNNFEPLLNASYSVATPFNYGAGHVHPNGATDPGLVYDIEVNEYLLFLCALGYNQAQISQFSNGPFNCSEPISLMNLNYPSITVPKLSRSITITRRLKNVGSPGMYKAEIRKPAGISVWVKPKTLNFTRLGEEQSFKVFMKVKEQNVAKKNYVYGDLIWSDDDDDSSLSPLCAL | 572 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 21876001 | 21888610 | - | Lsi11G013270.1 | Lsi11g01327 | 674494 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01327 | 572 | CDD | PA_subtilisin_like | 222 | 324 | - | - | |
Lsi11g01327 | 572 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 360 | 370 | IPR023828 | - | |
Lsi11g01327 | 572 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 324 | 561 | IPR045051 | - | |
Lsi11g01327 | 572 | SUPERFAMILY | Subtilisin-like | 34 | 433 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi11g01327 | 572 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 429 | - | - | |
Lsi11g01327 | 572 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 324 | 561 | - | - | |
Lsi11g01327 | 572 | Pfam | Fibronectin type-III domain | 474 | 561 | IPR041469 | - | |
Lsi11g01327 | 572 | Pfam | PA domain | 266 | 317 | IPR003137 | - | |
Lsi11g01327 | 572 | PRINTS | Subtilisin serine protease family (S8) signature | 359 | 375 | IPR015500 | - | |
Lsi11g01327 | 572 | PRINTS | Subtilisin serine protease family (S8) signature | 81 | 94 | IPR015500 | - | |
Lsi11g01327 | 572 | Pfam | Subtilase family | 61 | 399 | IPR000209 | GO:0006508|GO:0008236 | |
Lsi11g01327 | 572 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 30 | 321 | IPR045051 | - | |
Lsi11g01327 | 572 | CDD | Peptidases_S8_3 | 33 | 396 | IPR034197 | - | |
Lsi11g01327 | 572 | Gene3D | Peptidase S8/S53 domain | 33 | 214 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi11g01327 | 572 | Gene3D | Peptidase S8/S53 domain | 323 | 442 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi11g01327 | 572 | SUPERFAMILY | PA domain | 274 | 316 | IPR046450 | - | |
Lsi11g01327 | 572 | Gene3D | - | 446 | 571 | - | - | |
Lsi11g01327 | 572 | Gene3D | - | 215 | 313 | - | - | |
Lsi11g01327 | 572 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 30 | 321 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi07g01445 | Lsi-Chr7:20991905 | Lsi11g01327 | Lsi-Chr11:21876001 | 0 | dispersed | |
Lsi11g01327 | Lsi-Chr11:21876001 | Lsi07g01434 | Lsi-Chr7:20880035 | 3.41E-80 | dispersed | |
Lsi11g01327 | Lsi-Chr11:21876001 | Lsi02g02892 | Lsi-Chr2:35145004 | 1.45E-128 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01327 | - | - | mcha:111007513 | 816.224 |