Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01355 | ATGCTGCTGACTTGTAGCAATCCTAATCCACTATATCTTTCCATCCCCAATATAACCTCCATTTTCACTACCATTCATCCTCGTCTAAAACCAGCCTTCAGCCCTCCTCTGGCATTGCATCAAACTTTTAAGAAGCTTCACACACTCATGGCCACCTCTGCTATCCAACAGTCTGCCTTCGCCGGCCAGGCTGCCTTGAAGCAATCCAATGAGCTTGTCCGAAGGGTCGGTGCTGTCGGTGGCGGCCGCTTCACCATGCGGCGAACAGTCAAGAGTGCTCCACAGAGCATATGGTATGGACCAGATCGCCCAAAATACTTGGGACCATTCTCTGAACAAACACCATCTTACCTGACTGGAGAGTTCCCTGGTGACTATGGATGGGACACAGCCGGTCTATCAGCAGATCCCGAGACTTTTGCAAAGAACCGTGAGCTTGAGGTGATCCACTCCCGATGGGCCATGCTTGGTGCATTAGGTTGCGTCTTCCCTGAACTCCTTGCAAAGAATGGCGTCCAGTTTGGTGAATCAGTTTGGTTCAAGGCTGGTTCTCAGATCTTCTCTGAGGGTGGTCTAGATTACCTTGGCAACCCAAACCTCATCCATGCTCAGAGTATCCTTGCAATCTGGGCTGTCCAGGTTGTGCTCATGGGCTTTGTTGAAGGTTACCGAGTTGGCGGTGGTCCCCTTGGTGAAGGACTGGACCCAATTTACCCAGGAGGCGCCTTCGACCCACTCGGGTTGGCAGATGACCCAGATGCATTTGCTGAGTTGAAGGTGAAGGAACTAAAGAATGGAAGGCTGGCGATGTTCTCCATGTTCGGATTCTTTGTCCAGGCTATTGTCACCGGAAAGGGTCCTATTGAGAATCTCTTTGACCATGTTGCAGATCCTGTTGCCAACAATGCATGGGCTTACGCTACCAACTTTGTCCCCGGAAAATGA | 945 | 50.9 | MLLTCSNPNPLYLSIPNITSIFTTIHPRLKPAFSPPLALHQTFKKLHTLMATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKNGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK | 314 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22168602 | 22170817 | + | Lsi11G013550.1 | Lsi11g01355 | 674522 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01355 | 314 | SUPERFAMILY | Chlorophyll a-b binding protein | 97 | 311 | - | - | |
Lsi11g01355 | 314 | Gene3D | Chlorophyll a/b binding protein domain | 105 | 307 | - | - | |
Lsi11g01355 | 314 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED | 50 | 314 | - | - | |
Lsi11g01355 | 314 | Pfam | Chlorophyll A-B binding protein | 115 | 280 | IPR022796 | - | |
Lsi11g01355 | 314 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 50 | 314 | IPR001344 | GO:0009765|GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi04g02433 | Lsi-Chr4:31387743 | Lsi11g01355 | Lsi-Chr11:22168602 | 6.58E-11 | dispersed | |
Lsi05g00685 | Lsi-Chr5:9123085 | Lsi11g01355 | Lsi-Chr11:22168602 | 1.69E-124 | dispersed | |
Lsi08g00191 | Lsi-Chr8:4030824 | Lsi11g01355 | Lsi-Chr11:22168602 | 1.10E-57 | dispersed | |
Lsi08g01472 | Lsi-Chr8:22846371 | Lsi11g01355 | Lsi-Chr11:22168602 | 3.21E-32 | dispersed | |
Lsi11g01355 | Lsi-Chr11:22168602 | Lsi01g00172 | Lsi-Chr1:1668479 | 1.48E-150 | transposed | |
Lsi11g01355 | Lsi-Chr11:22168602 | Lsi10g01537 | Lsi-Chr10:19772142 | 1.41E-150 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01355 | K08913 | - | csv:101212963 | 526.939 |