Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi11g01440 ATGGCCTGGACCCGACGATCCGCCGTCGGCAACGGCTCCTCCGCCACCGTCTACCTCGCCTCCGCCGCCTCCTCCGGTGAGCTATTCGCCGTCAAGTCCGCCGACCTACTCAAATCAGACTTCTTGAAAACAGAGCAGAGGATTCTTTCTTCCCTGTCCCACCCTTCAATTGTGGGCTACAGGGGGTTCGATGTAACCAGAGAAAATGGGAAGCTAATGTACAATCTCTTCATGGAGTACGCCGCCGGTGGCTCTCTCACCGACGAAATCTTCCGGAGTGGTGGCTGGATTAAGGAGGCGGCGGCGGCGTTTTACACGCGTCAAATTGTTAGAGGATTAGAGTACTTGCACAAACAGGGTTTGGTGCATTGTGATATCAAAGCTAAGAATATTTTAATCGGTGGAGATGGTTTGAAGATTGCTGATTTCGGATGCTCCAAATGGGTCTGTGTGGCGGAGGCGACGATCGGCGGAACGCCGATGTTCATGGCACCGGAAGTGGCGCGTGGGGAAAAACAGGGGATTTCCTCTGACATTTGGGCACTTGGGTGTACTTTAATTGAAATGGTCACCGGCGCCCCACCATGGCCCATTTCCGGCGACCCTGTTTCGGTGCTGTACCGGATCGGATATTCCGGCGACTCACCGGAAATTCCGAGCTTTTTATCGAAGAAAGCGAAGGATTTTTTAAGGAAATGCTTGAGAAGTGACCCAACAGAACGATGGAGCGCAAGTCAACTTCTTGAACATCCATTTTTGGGGGAATTGAGTTCTGGGTTAGAGGAAATCAAGGAATTACATCCACATTCCGAATCCCCCACGAGTATTTTGGATCAAAGCCTCTGGAATTCGTTAGAAGAAGAATCAGAAACACTGTTGAAAACAGAGCAATGGGATGATGATGATGAAAGAATCAAACGGCTGGCGATGTTTTCAGGAGAAATTAAATGGGAATTGGGAGATGAGAATTGGATCACAATCAGAAGCAGTATGGATGGTGAAGATGAAGATGAATCCAAATTAGAAGAAAAGATTTAG 1038 48.94 MAWTRRSAVGNGSSATVYLASAASSGELFAVKSADLLKSDFLKTEQRILSSLSHPSIVGYRGFDVTRENGKLMYNLFMEYAAGGSLTDEIFRSGGWIKEAAAAFYTRQIVRGLEYLHKQGLVHCDIKAKNILIGGDGLKIADFGCSKWVCVAEATIGGTPMFMAPEVARGEKQGISSDIWALGCTLIEMVTGAPPWPISGDPVSVLYRIGYSGDSPEIPSFLSKKAKDFLRKCLRSDPTERWSASQLLEHPFLGELSSGLEEIKELHPHSESPTSILDQSLWNSLEEESETLLKTEQWDDDDERIKRLAMFSGEIKWELGDENWITIRSSMDGEDEDESKLEEKI 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22938320 22939357 + Lsi11G014400.1 Lsi11g01440 674607

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi11g01440 345 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi11g01440 345 PANTHER MAP KINASE KINASE KINASE 1 335 - -
Lsi11g01440 345 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Lsi11g01440 345 CDD STKc_MAPKKK 3 253 - -
Lsi11g01440 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lsi11g01440 345 Gene3D Transferase(Phosphotransferase) domain 1 2 317 - -
Lsi11g01440 345 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi11g01440 345 Pfam Protein kinase domain 5 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi11g01440 345 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 335 - -
Lsi11g01440 345 SUPERFAMILY Protein kinase-like (PK-like) 6 294 IPR011009 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi11g01440 K20716 MAPKKK17_18; mitogen-activated protein kinase kinase kinase 17/18 - csv:101205351 592.423
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01269 Lsi-Chr2:16870314 Lsi11g01440 Lsi-Chr11:22938320 5.35E-64 dispersed
Lsi02g01893 Lsi-Chr2:24833368 Lsi11g01440 Lsi-Chr11:22938320 1.20E-100 dispersed
Lsi11g00542 Lsi-Chr11:5665789 Lsi11g01440 Lsi-Chr11:22938320 4.20E-53 dispersed
Lsi11g01440 Lsi-Chr11:22938320 Lsi02g02474 Lsi-Chr2:31238386 3.16E-49 dispersed
Lsi01g00445 Lsi-Chr1:3704520 Lsi11g01440 Lsi-Chr11:22938320 1.30E-113 wgd
Lsi10g00114 Lsi-Chr10:1804629 Lsi11g01440 Lsi-Chr11:22938320 1.13E-132 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi12g395 . . . . Bpe12g00279 . . Bma08g00642 Cmo11g01890 Cmo19g00939 Cma02g00175 Cma20g00605 Car02g00150 Car20g00544 Sed05g2032 Cpe15g00739 Cpe04g00721 Bhi05g01344 Tan02g0354 Cmetu01g0322 Lac12g0574 Hepe02g0231 . . Cla02g00198 Cam02g0216 Cec02g0212 Cco02g0207 Clacu02g0208 Cmu02g0204 Cre02g0537 . . Cone8ag1426 Cone12ag1369 . Csa07g00349 Chy11g00625 Cme01g00435 . Blo13g00404 Bda14g00703 Bda15g00951 . . . . Sed01g0494 Cmo02g00180 . Cma11g01815 Cma19g00913 Car11g01503 Car19g00708 Cpe16g00429 Cpe05g01434 Bhi10g01409 Tan05g0893 Cmetu01g1454 . Hepe08g0454 . . Cla02g00871 Cam02g0934 Cec02g0926 Cco02g0982 Clacu02g0922 Cmu02g0901 Cre02g1223 Lsi11g01440 . Chy01g00438 Cme11g00827
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi11g00542 . 1 623 MAP Kinase Kinase Kinase AT1G09000 58.4 2.7e-182 635.6
Lsi09g01341 . 1 602 MAP Kinase Kinase Kinase AT1G09000 56.5 5.0e-168 588.2
Lsi11g00542 . 1 682 MAP Kinase Kinase Kinase AT1G54960 56.7 1.9e-189 659.4
Lsi09g01341 . 1 632 MAP Kinase Kinase Kinase AT1G54960 53.8 4.2e-165 578.6
Lsi01g01155 . 1 473 MAP Kinase Kinase Kinase AT1G53570 54.4 9.8e-133 470.7
Lsi05g01214 . 342 722 MAP Kinase Kinase Kinase AT1G53570 55.3 7.9e-106 381.3
Lsi09g00476 . 294 642 MAP Kinase Kinase Kinase AT1G53570 50.4 5.5e-91 332.0
Lsi01g00997 . 445 708 MAP Kinase Kinase Kinase AT1G53570 58.3 2.1e-87 320.1
Lsi09g01341 . 65 327 MAP Kinase Kinase Kinase AT1G53570 51.9 2.0e-77 287.0
Lsi05g01214 . 1 930 MAP Kinase Kinase Kinase AT1G63700 56.0 5.3e-256 880.9
Lsi09g00476 . 1 858 MAP Kinase Kinase Kinase AT1G63700 53.1 3.5e-231 798.5
Lsi01g01155 . 146 453 MAP Kinase Kinase Kinase AT1G63700 56.8 4.7e-103 372.9
Lsi09g01341 . 65 327 MAP Kinase Kinase Kinase AT1G63700 53.2 7.8e-74 275.8
Lsi01g00997 . 226 716 MAP Kinase Kinase Kinase AT5G66850 58.6 7.7e-162 567.8
Lsi09g00476 . 338 643 MAP Kinase Kinase Kinase AT5G66850 53.6 9.9e-85 311.6
Lsi03g01161 . 151 1445 MAP Kinase Kinase Kinase AT3G07980 63.8 0.0e+00 1438.7
Lsi03g01161 . 1 1445 MAP Kinase Kinase Kinase AT3G13530 67.6 0.0e+00 1799.3
Lsi09g01341 . 1 648 MAP Kinase Kinase Kinase AT3G06030 59.3 2.1e-193 672.5
Lsi11g00542 . 1 662 MAP Kinase Kinase Kinase AT3G06030 53.8 2.3e-179 625.9
Lsi02g01269 . 1 377 MAP Kinase Kinase Kinase AT1G07150 52.9 1.4e-101 367.1
Lsi02g01269 . 8 354 MAP Kinase Kinase Kinase AT2G30040 56.9 8.5e-104 374.4
Lsi02g01893 . 1 338 MAP Kinase Kinase Kinase AT4G26890 52.4 1.1e-92 337.4
Lsi10g00114 . 1 345 MAP Kinase Kinase Kinase AT1G05100 51.1 3.5e-91 332.0
Lsi11g01440 . 1 330 MAP Kinase Kinase Kinase AT1G05100 52.0 3.1e-87 318.9
Lsi01g00972 CCT 1 356 MAP Kinase Kinase Kinase AT5G67080 53.3 2.0e-105 379.4
Lsi10g00532 CCT 1 343 MAP Kinase Kinase Kinase AT5G67080 50.6 4.2e-92 335.1
Lsi01g00972 CCT 1 356 MAP Kinase Kinase Kinase AT3G50310 52.7 7.2e-100 360.9
Lsi01g00972 CCT 1 356 MAP Kinase Kinase Kinase AT4G36950 54.1 2.0e-102 369.4
Lsi10g00532 CCT 1 343 MAP Kinase Kinase Kinase AT4G36950 51.6 1.2e-91 333.6
Lsi10g01482 . 18 438 MAP Kinase Kinase Kinase AT3G51630 67.5 1.8e-161 566.2
Lsi01g01612 . 4 403 MAP Kinase Kinase Kinase AT3G51630 64.2 1.7e-151 533.1
Lsi02g00417 . 18 404 MAP Kinase Kinase Kinase AT3G51630 56.4 1.6e-125 446.8
Lsi06g00807 CCT 18 440 MAP Kinase Kinase Kinase AT3G51630 53.4 2.0e-120 429.9
Lsi09g01322 . 7 409 MAP Kinase Kinase Kinase AT3G51630 54.0 1.4e-116 417.2
Lsi11g00467 CCT 25 433 MAP Kinase Kinase Kinase AT3G51630 53.2 1.8e-113 406.8
Lsi10g00058 . 12 291 MAP Kinase Kinase Kinase AT3G51630 55.4 3.8e-87 319.3
Lsi05g00526 . 9 283 MAP Kinase Kinase Kinase AT3G51630 55.3 9.4e-86 314.7
Lsi10g01482 . 23 617 MAP Kinase Kinase Kinase AT5G58350 58.4 1.3e-183 639.8
Lsi01g01612 . 1 563 MAP Kinase Kinase Kinase AT5G58350 51.9 3.1e-148 522.3
Lsi06g00807 CCT 20 440 MAP Kinase Kinase Kinase AT5G58350 54.4 1.1e-124 444.1
Lsi02g00417 . 17 404 MAP Kinase Kinase Kinase AT5G58350 56.0 5.9e-123 438.3
Lsi09g01322 . 14 413 MAP Kinase Kinase Kinase AT5G58350 52.0 3.5e-115 412.5
Lsi11g00467 CCT 25 433 MAP Kinase Kinase Kinase AT5G58350 51.2 1.5e-110 397.1
Lsi10g00058 . 16 283 MAP Kinase Kinase Kinase AT5G58350 58.2 5.0e-90 328.9
Lsi05g00526 . 17 277 MAP Kinase Kinase Kinase AT5G58350 56.7 9.8e-86 314.7
Lsi06g00807 CCT 7 440 MAP Kinase Kinase Kinase AT3G22420 62.3 1.1e-159 560.5
Lsi02g00417 . 8 414 MAP Kinase Kinase Kinase AT3G22420 53.1 1.5e-132 470.3
Lsi10g00058 . 9 286 MAP Kinase Kinase Kinase AT3G22420 51.8 1.4e-90 330.9
Lsi05g00526 . 8 287 MAP Kinase Kinase Kinase AT3G22420 50.6 2.2e-88 323.6
Lsi11g00467 CCT 113 623 MAP Kinase Kinase Kinase AT3G04910 55.9 9.4e-145 510.8
Lsi10g01482 . 136 406 MAP Kinase Kinase Kinase AT3G04910 50.9 7.3e-81 298.5
Lsi02g00417 . 131 404 MAP Kinase Kinase Kinase AT3G04910 50.3 3.6e-80 296.2
Lsi10g00058 . 129 293 MAP Kinase Kinase Kinase AT3G04910 63.0 6.9e-55 212.2
Lsi05g00526 . 130 287 MAP Kinase Kinase Kinase AT3G04910 66.7 9.0e-55 211.8
Lsi05g00526 . 4 184 MAP Kinase Kinase Kinase AT3G18750 54.8 1.4e-51 201.1
Lsi10g00058 . 17 190 MAP Kinase Kinase Kinase AT3G18750 55.2 3.1e-51 199.9
Lsi09g00148 . 13 630 MAP Kinase Kinase Kinase AT5G41990 51.8 4.4e-155 545.0
Lsi02g00417 . 7 403 MAP Kinase Kinase Kinase AT5G41990 55.5 2.1e-125 446.4
Lsi10g01482 . 20 403 MAP Kinase Kinase Kinase AT5G41990 50.7 7.4e-110 394.8
Lsi09g01322 . 9 416 MAP Kinase Kinase Kinase AT5G41990 50.1 9.6e-110 394.4
Lsi11g00467 CCT 25 429 MAP Kinase Kinase Kinase AT5G41990 50.6 2.2e-106 383.3
Lsi05g00526 . 8 277 MAP Kinase Kinase Kinase AT5G41990 58.8 5.0e-90 328.9
Lsi10g00058 . 16 292 MAP Kinase Kinase Kinase AT5G41990 57.4 8.5e-90 328.2
Lsi09g00148 . 131 437 MAP Kinase Kinase Kinase AT1G49160 54.2 2.3e-87 319.7
Lsi10g00058 . 126 283 MAP Kinase Kinase Kinase AT1G49160 59.5 4.5e-51 199.1
Lsi05g00526 . 127 277 MAP Kinase Kinase Kinase AT1G49160 62.7 1.5e-49 194.1
Lsi10g00058 . 10 291 MAP Kinase Kinase Kinase AT5G55560 77.3 6.5e-132 467.2
Lsi05g00526 . 11 284 MAP Kinase Kinase Kinase AT5G55560 78.0 5.7e-128 454.1
Lsi02g00417 . 12 291 MAP Kinase Kinase Kinase AT5G55560 64.5 2.4e-102 369.0
Lsi09g01322 . 12 282 MAP Kinase Kinase Kinase AT5G55560 62.5 1.8e-97 352.8
Lsi06g00807 CCT 18 288 MAP Kinase Kinase Kinase AT5G55560 61.8 8.9e-97 350.5
Lsi10g01482 . 23 290 MAP Kinase Kinase Kinase AT5G55560 60.1 1.5e-91 333.2
Lsi01g01612 . 7 274 MAP Kinase Kinase Kinase AT5G55560 56.0 4.0e-89 325.1
Lsi09g00148 . 1 287 MAP Kinase Kinase Kinase AT5G55560 55.4 1.9e-86 316.2
Lsi11g00467 CCT 25 273 MAP Kinase Kinase Kinase AT5G55560 60.2 1.7e-84 309.7
Lsi11g00467 CCT 48 498 MAP Kinase Kinase Kinase AT5G28080 61.5 5.7e-145 511.1
Lsi06g00807 CCT 7 439 MAP Kinase Kinase Kinase AT5G28080 57.9 8.0e-139 490.7
Lsi09g01322 . 4 469 MAP Kinase Kinase Kinase AT5G28080 52.3 1.5e-129 459.9
Lsi05g00526 . 11 277 MAP Kinase Kinase Kinase AT5G28080 50.4 9.9e-73 271.2
Lsi02g00417 . 11 394 MAP Kinase Kinase Kinase AT1G64630 54.5 7.3e-120 427.9
Lsi06g00807 CCT 20 435 MAP Kinase Kinase Kinase AT1G64630 51.6 5.2e-118 421.8
Lsi05g00526 . 13 274 MAP Kinase Kinase Kinase AT1G64630 60.6 3.0e-89 326.2
Lsi10g00058 . 16 295 MAP Kinase Kinase Kinase AT1G64630 56.4 9.6e-88 321.2
Lsi02g00417 . 104 605 MAP Kinase Kinase Kinase AT3G48260 51.7 4.2e-126 448.4
Lsi11g00467 CCT 86 434 MAP Kinase Kinase Kinase AT3G48260 54.0 7.7e-96 347.8
Lsi10g01482 . 108 411 MAP Kinase Kinase Kinase AT3G48260 56.3 1.5e-94 343.6
Lsi09g00148 . 106 438 MAP Kinase Kinase Kinase AT3G48260 53.4 2.1e-93 339.7
Lsi06g00807 CCT 108 463 MAP Kinase Kinase Kinase AT3G48260 51.4 3.6e-93 339.0
Lsi01g01612 . 92 384 MAP Kinase Kinase Kinase AT3G48260 52.5 4.7e-85 312.0
Lsi09g01322 . 102 403 MAP Kinase Kinase Kinase AT3G48260 56.4 6.8e-84 308.1
Lsi10g00058 . 101 283 MAP Kinase Kinase Kinase AT3G48260 69.4 4.9e-74 275.4
Lsi05g00526 . 102 277 MAP Kinase Kinase Kinase AT3G48260 68.3 8.9e-68 254.6
Lsi01g01250 CCT 1 813 MAP Kinase Kinase Kinase AT5G03730 60.8 5.8e-281 963.8
Lsi03g01941 CCT 63 995 MAP Kinase Kinase Kinase AT5G03730 53.5 1.3e-256 882.9
Lsi02g00226 . 1 861 MAP Kinase Kinase Kinase AT1G18160 53.0 1.1e-238 823.5
Lsi02g00226 . 1 898 MAP Kinase Kinase Kinase AT1G73660 54.1 2.2e-261 899.0
Lsi04g02284 . 1 891 MAP Kinase Kinase Kinase AT4G24480 56.4 6.0e-282 967.2
Lsi04g01431 . 724 843 MAP Kinase Kinase Kinase AT3G06620 61.7 1.5e-41 168.3
Lsi09g01493 . 123 668 MAP Kinase Kinase Kinase AT3G06630 50.9 1.2e-148 523.9
Lsi04g01431 . 721 843 MAP Kinase Kinase Kinase AT3G06640 62.6 3.8e-42 170.2
Lsi09g01493 . 162 701 MAP Kinase Kinase Kinase AT5G49470 50.7 1.0e-160 563.9
Lsi04g01431 . 724 843 MAP Kinase Kinase Kinase AT5G49470 60.8 5.4e-40 162.9
Lsi09g01493 . 162 684 MAP Kinase Kinase Kinase AT1G67890 54.0 1.3e-147 520.4
Lsi04g01431 . 724 853 MAP Kinase Kinase Kinase AT4G23050 61.5 6.6e-42 169.5
Lsi10g01592 . 1 796 MAP Kinase Kinase Kinase AT2G31010 61.0 1.8e-263 905.6
Lsi10g01592 . 1 796 MAP Kinase Kinase Kinase AT3G58640 60.7 6.3e-272 933.7
Lsi06g01054 . 1159 1320 MAP Kinase Kinase Kinase AT1G04700 74.1 3.9e-68 256.9
Lsi04g00391 . 41 408 MAP Kinase Kinase Kinase AT1G14000 88.3 1.1e-196 682.9
Lsi01g00468 CCT 1 373 MAP Kinase Kinase Kinase AT1G62400 81.8 1.0e-179 626.3
Lsi02g00366 . 30 327 MAP Kinase Kinase Kinase AT1G62400 65.6 7.9e-111 397.5
Lsi02g00759 . 155 454 MAP Kinase Kinase Kinase AT1G62400 51.7 2.2e-89 326.2
Lsi07g01075 . 1 554 MAP Kinase Kinase Kinase AT2G17700 65.3 4.3e-208 721.1
Lsi04g01782 CCT,ECH 4 489 MAP Kinase Kinase Kinase AT2G17700 51.4 1.2e-138 490.3
Lsi11g01225 . 3 366 MAP Kinase Kinase Kinase AT2G17700 52.6 1.1e-107 387.5
Lsi11g00832 . 1 474 MAP Kinase Kinase Kinase AT2G24360 64.7 4.8e-167 584.3
Lsi01g00206 CCT 35 423 MAP Kinase Kinase Kinase AT2G31800 51.9 1.4e-80 297.4
Lsi03g00825 . 1 310 MAP Kinase Kinase Kinase AT2G31800 52.7 4.7e-65 245.7
Lsi01g00206 CCT 35 423 MAP Kinase Kinase Kinase AT2G43850 52.3 5.5e-82 302.0
Lsi03g00825 . 1 310 MAP Kinase Kinase Kinase AT2G43850 57.8 2.1e-73 273.5
Lsi05g01626 . 32 368 MAP Kinase Kinase Kinase AT4G14780 68.6 4.9e-139 491.1
Lsi06g01545 . 8 425 MAP Kinase Kinase Kinase AT4G14780 57.7 3.5e-137 485.0
Lsi03g01392 . 1 410 MAP Kinase Kinase Kinase AT4G14780 58.4 7.3e-135 477.2
Lsi02g00843 CCT 11 415 MAP Kinase Kinase Kinase AT4G18950 66.2 7.4e-158 553.9
Lsi01g00206 CCT 6 420 MAP Kinase Kinase Kinase AT4G18950 58.1 7.7e-131 464.2
Lsi11g00832 . 19 301 MAP Kinase Kinase Kinase AT4G31170 72.6 5.3e-110 394.4
Lsi07g01075 . 4 565 MAP Kinase Kinase Kinase AT4G35780 65.5 5.0e-215 744.2
Lsi04g01782 CCT,ECH 7 484 MAP Kinase Kinase Kinase AT4G35780 51.7 6.9e-140 494.6
Lsi07g01075 . 3 507 MAP Kinase Kinase Kinase AT4G38470 61.7 1.8e-179 625.9
Lsi11g01225 . 3 367 MAP Kinase Kinase Kinase AT4G38470 59.5 4.0e-131 465.3
Lsi04g01782 CCT,ECH 1 443 MAP Kinase Kinase Kinase AT4G38470 52.3 3.2e-128 455.7
Lsi03g02273 . 43 372 MAP Kinase Kinase Kinase AT5G01850 74.3 2.7e-142 501.9
Lsi06g01595 . 16 299 MAP Kinase Kinase Kinase AT5G01850 64.1 3.7e-107 385.2
Lsi03g01347 . 15 284 MAP Kinase Kinase Kinase AT5G01850 60.2 5.7e-100 361.3
Lsi06g01595 . 7 249 MAP Kinase Kinase Kinase AT5G40540 84.8 7.4e-119 423.7
Lsi03g01347 . 1 234 MAP Kinase Kinase Kinase AT5G40540 78.6 1.3e-110 396.4
Lsi03g02273 . 35 277 MAP Kinase Kinase Kinase AT5G40540 70.4 3.2e-98 355.1
Lsi02g01597 . 158 437 MAP Kinase Kinase Kinase AT5G40540 61.1 4.5e-84 308.1
Lsi06g01545 . 1 357 MAP Kinase Kinase Kinase AT5G50000 71.6 9.5e-142 500.0
Lsi03g01392 . 6 342 MAP Kinase Kinase Kinase AT5G50000 74.2 3.4e-131 464.9
Lsi02g02266 . 47 388 MAP Kinase Kinase Kinase AT5G50000 53.4 1.2e-104 376.7
Lsi05g01626 . 37 303 MAP Kinase Kinase Kinase AT5G50000 55.6 2.6e-91 332.4
Lsi06g01595 . 14 353 MAP Kinase Kinase Kinase AT5G50180 80.9 7.1e-164 573.5
Lsi03g01347 . 9 338 MAP Kinase Kinase Kinase AT5G50180 72.1 1.7e-141 499.2
Lsi03g02273 . 50 332 MAP Kinase Kinase Kinase AT5G50180 70.7 1.4e-114 409.8
Lsi11g00730 . 136 1230 MAP Kinase Kinase Kinase AT5G57610 53.2 5.3e-295 1010.7
Lsi01g00311 . 1 494 MAP Kinase Kinase Kinase AT5G58950 57.7 4.8e-172 601.3
Lsi02g00759 . 1 467 MAP Kinase Kinase Kinase AT5G58950 52.9 6.4e-148 521.2
Lsi02g00366 . 26 321 MAP Kinase Kinase Kinase AT5G58950 50.2 2.5e-88 323.2
Lsi06g01595 . 14 295 MAP Kinase Kinase Kinase AT5G66710 54.1 5.7e-80 295.0
Lsi03g02273 . 43 323 MAP Kinase Kinase Kinase AT5G66710 52.1 5.0e-76 282.0
Lsi03g01347 . 13 277 MAP Kinase Kinase Kinase AT5G66710 50.5 1.5e-72 270.4
Lsi06g01545 . 7 357 MAP Kinase Kinase Kinase AT3G01490 67.0 1.1e-135 479.9
Lsi03g01392 . 1 342 MAP Kinase Kinase Kinase AT3G01490 68.4 3.2e-135 478.4
Lsi02g02266 . 55 388 MAP Kinase Kinase Kinase AT3G01490 52.3 9.4e-103 370.5
Lsi05g01626 . 42 303 MAP Kinase Kinase Kinase AT3G01490 52.6 2.0e-89 326.2
Lsi05g01626 . 32 364 MAP Kinase Kinase Kinase AT3G22750 71.5 2.4e-144 508.8
Lsi06g01545 . 6 425 MAP Kinase Kinase Kinase AT3G22750 59.7 9.9e-143 503.4
Lsi03g01392 . 13 410 MAP Kinase Kinase Kinase AT3G22750 60.6 1.6e-137 486.1
Lsi06g01595 . 1 347 MAP Kinase Kinase Kinase AT3G27560 76.1 1.3e-152 536.2
Lsi03g01347 . 1 332 MAP Kinase Kinase Kinase AT3G27560 71.2 4.6e-142 501.1
Lsi03g02273 . 34 326 MAP Kinase Kinase Kinase AT3G27560 69.3 3.9e-117 418.3
Lsi01g00311 . 83 400 MAP Kinase Kinase Kinase AT3G46930 54.1 3.9e-90 328.6
Lsi02g00759 . 66 399 MAP Kinase Kinase Kinase AT3G46930 51.6 4.9e-85 311.6
Lsi01g00206 CCT 35 423 MAP Kinase Kinase Kinase AT3G59830 50.1 1.6e-76 283.9
Lsi03g00825 . 1 310 MAP Kinase Kinase Kinase AT3G59830 54.6 5.3e-69 258.8
Lsi01g00206 CCT 2 344 MAP Kinase Kinase Kinase AT3G58760 68.3 4.8e-102 368.2
Lsi10g01548 . 7 332 MAP Kinase Kinase Kinase AT3G58760 69.6 7.0e-101 364.4
Lsi02g00843 CCT 11 338 MAP Kinase Kinase Kinase AT3G58760 52.4 8.0e-89 324.3
Lsi04g00391 . 160 366 MAP Kinase Kinase Kinase AT3G58760 55.2 1.5e-55 213.8
Lsi02g02266 . 43 402 MAP Kinase Kinase Kinase AT3G63260 56.5 3.0e-106 382.1
Lsi05g01626 . 23 303 MAP Kinase Kinase Kinase AT3G63260 59.8 1.8e-95 346.3
Lsi06g01545 . 24 357 MAP Kinase Kinase Kinase AT3G63260 55.2 3.1e-95 345.5
Lsi03g01392 . 63 342 MAP Kinase Kinase Kinase AT3G63260 59.3 3.7e-88 322.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001746 3 2 3 2 2 2 4 2 2 2 2 2 4 2 2 3 2 2 4 2 2 2 2 2 1 2 2 4 2 1 69
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84052 PF00069 Pkinase 6.40E-57 CL0016 Lsi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi11g01440 Lsi_Chr11 FPKM 3.865893 3.641887 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0