Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01466 | ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAATACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTTAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGGTTTCTGA | 342 | 44.15 | MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF | 113 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23229451 | 23231967 | - | Lsi11G014660.1 | Lsi11g01466 | 674633 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01466 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | - | |
Lsi11g01466 | 113 | PIRSF | Transl_init_SUI1_Euk | 1 | 113 | IPR005874 | GO:0003743 | |
Lsi11g01466 | 113 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 31 | 101 | IPR001950 | GO:0003743|GO:0006413 | |
Lsi11g01466 | 113 | TIGRFAM | SUI1_MOF2: translation initiation factor SUI1 | 6 | 113 | IPR005874 | GO:0003743 | |
Lsi11g01466 | 113 | Pfam | Translation initiation factor SUI1 | 28 | 102 | IPR001950 | GO:0003743|GO:0006413 | |
Lsi11g01466 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | - | |
Lsi11g01466 | 113 | CDD | eIF1_SUI1 | 29 | 112 | IPR005874 | GO:0003743 | |
Lsi11g01466 | 113 | Gene3D | - | 1 | 113 | - | - | |
Lsi11g01466 | 113 | SUPERFAMILY | eIF1-like | 4 | 113 | IPR036877 | GO:0003743|GO:0006413 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi05g00595 | Lsi-Chr5:7383441 | Lsi11g01466 | Lsi-Chr11:23229451 | 3.68E-62 | dispersed | |
Lsi11g01465 | Lsi-Chr11:23224759 | Lsi11g01466 | Lsi-Chr11:23229451 | 2.41E-45 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01466 | K03113 | - | csv:101219651 | 228.409 |