Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01469 | ATGACAATTTTAAGTCTATCAAAATCACACTTAAAACTTCTCTTCTTCAAAACCATGGCCATTAGTCCAAAGCTTCTCTTCCTTTTCTTTTTGCAGCTAATGCTTGTATCGTCTTTCTCGAACATCGCTGGAGCCCAAGACTTGGCCGTCGGGTTTTACCAGGGTAGCTGCCCTGGGGTGGAGTACATCGTTGCCAAAACGGTGGCACTATATATTAAGAAACAACCATCAATAGCTGCTTCTTTATTGAGGATACACTTCCATGACTGCTTTGTTAGGGGTTGTGATGGTTCTGTTCTGCTAAATTCTATAGCAAATAATCCAGCTGAGAAAGATGCATTTCCTAACCTTAGTCTAAGAGGTTTCAATGTCGTTGATGCCGTTAAAGCTGCTGTTGAAAAGCAATGCCCCGGCATCGTTTCTTGTGCTGATATCCTCGCTTTAATAGCTCGCGATGCTGTTAGAATGATTGGAGGCCCACTGTGGGAAGTTCCAACGGGAAGAAGAGACGGGACGGTATCAATCTCCAGAGAAGCGTTGATTAATTTGCCTCCTCCCTTCGCTAATATCTCATCTCTCAAAACAAGTTTCCTCTCCAAAGGTCTCTCCGTCAAAGATCTAGTCGTATTATCCGGAGCACACACAATCGGAGTCTCTCACTGCACCTCTTTCTCCAACCGCCTCTACAATTTCACAGGCAAAGGCGACGCCGATCCCAAACTAGACAAATACTACGCCGTCGCACTCAAGAATAAATGCAAGCCAAATGACCAGAAAACCACCGTCGAGATGGATCCTGGAAGCTTCAAGACCTTCGATCAAGGTTACTACACTCTCGTCTCCAAGAGAAGAGGATTGTTCCAGTCCGATTCCGCTCTTCTCGACGATCCTGACACTAAAGCCTACGTTCAGTTTCAGGCCAGTACACGCGGCGCTACTTTCGCCGCCGATTTCGCCGAATCCATGGTTAATATGGGGAATATCGACGTCCTCACTGGCACCGACGGCGAAATTAGGAGTCGATGTGCTTTTAAACGGACAACGTGTTCTGCAGTTGCTTTTCAGTCGAGTGCTAGCTGTGAAGATCATCTAATTCTCTTCTTCAAAACCATGGCCATTAGTCCAAAACTTTTCTTCCTTCTCTTTTTACAGCTAATGCTTGTATCGTCTCTCTCGAACATCACCGAAGCAAAAAAGTTGGCAGTCGGGTTTTATCGGGGTAGTTGCCCGGGGGTAGAGTATATCGTCGCCAAAACGGTGGCTCAATATATTAAGAAACAACCAACTCTTGCTGCTTCTTTATTGAGGATGCACTTCCATGATTGCTTTGTTAGGGGTTGTGATGGTTCTGTGCTGCTAAATTCCAAACCAAACAACCAAGCTGAAAAAGATTCTTTCCCCAACCTTAGTTTAAGAGGTTTCAATGTCGTTGACATTGTTAAAGCTGCCGTCGAAAAGCAGTGCCCTGGCGTCGTTTCTTGTGCTGACATCCTCGCTTTGATAGCCCGTGATGTCGTTAGAATGATTGGAGGGCCACTATGGAAAGTTCCAACAGGAAGAAGAGACGGAACAGTATCAATTTCTAGAGAAGCGTTGATTAATTTGCCTCCTCCCTTCGCTAACATCTCATCTCTCAAAACAAGTTTCCTCTCCAAAGGTCTCTCCGTCAAAGATCTAGTCGTATTATCCGGAGCACATACAATCGGAGTCTCTCACTGCACCTCCTTCTCCAACCGCCTGTACAATTTCACCGGCAAAGGCGATGCCGATCCCAAACTAGATAAATACTACGCCATCGCACTCAAGAAGAAATGCAAGCCAAATGACCAGAAAACCATCGTCGAGATGGATCCTGGAAGCTTCAAGACCTTCGATCAAGGTTACTACACTCTTGTCTCCAAGAGAAGAGGATTGTTCCAGTCCGATTCCGCTCTTCTCGACGATCCTGATACTAAAGCCTACGTTCTGCTTCAGGCCAATACACGTGGTGCTACTTTTGCCGCCGATTTCGCTAAATCTATGGTTAATATGGGGAATATCGGCGTCCTCACCGGCACTGATGGCGAAATTAGGCGGCGATGTGCTTTTGTTAATTGA | 2097 | 45.83 | MTILSLSKSHLKLLFFKTMAISPKLLFLFFLQLMLVSSFSNIAGAQDLAVGFYQGSCPGVEYIVAKTVALYIKKQPSIAASLLRIHFHDCFVRGCDGSVLLNSIANNPAEKDAFPNLSLRGFNVVDAVKAAVEKQCPGIVSCADILALIARDAVRMIGGPLWEVPTGRRDGTVSISREALINLPPPFANISSLKTSFLSKGLSVKDLVVLSGAHTIGVSHCTSFSNRLYNFTGKGDADPKLDKYYAVALKNKCKPNDQKTTVEMDPGSFKTFDQGYYTLVSKRRGLFQSDSALLDDPDTKAYVQFQASTRGATFAADFAESMVNMGNIDVLTGTDGEIRSRCAFKRTTCSAVAFQSSASCEDHLILFFKTMAISPKLFFLLFLQLMLVSSLSNITEAKKLAVGFYRGSCPGVEYIVAKTVAQYIKKQPTLAASLLRMHFHDCFVRGCDGSVLLNSKPNNQAEKDSFPNLSLRGFNVVDIVKAAVEKQCPGVVSCADILALIARDVVRMIGGPLWKVPTGRRDGTVSISREALINLPPPFANISSLKTSFLSKGLSVKDLVVLSGAHTIGVSHCTSFSNRLYNFTGKGDADPKLDKYYAIALKKKCKPNDQKTIVEMDPGSFKTFDQGYYTLVSKRRGLFQSDSALLDDPDTKAYVLLQANTRGATFAADFAKSMVNMGNIGVLTGTDGEIRRRCAFVN | 698 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23252468 | 23261527 | + | Lsi11G014690.1 | Lsi11g01469 | 674636 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01469 | 698 | ProSiteProfiles | Plant heme peroxidase family profile. | 399 | 698 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | SUPERFAMILY | Heme-dependent peroxidases | 48 | 343 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PANTHER | PEROXIDASE | 32 | 345 | - | - | |
Lsi11g01469 | 698 | Pfam | Peroxidase | 65 | 307 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | Pfam | Peroxidase | 416 | 659 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | Gene3D | Peroxidase, domain 2 | 536 | 677 | - | - | |
Lsi11g01469 | 698 | Gene3D | Peroxidase, domain 2 | 184 | 325 | - | - | |
Lsi11g01469 | 698 | ProSiteProfiles | Plant heme peroxidase family profile. | 47 | 346 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PANTHER | PEROXIDASE 25-RELATED | 32 | 345 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PANTHER | PEROXIDASE 25-RELATED | 381 | 697 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | SUPERFAMILY | Heme-dependent peroxidases | 400 | 698 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Haem peroxidase superfamily signature | 140 | 157 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Haem peroxidase superfamily signature | 79 | 93 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Haem peroxidase superfamily signature | 158 | 170 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Haem peroxidase superfamily signature | 265 | 280 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Haem peroxidase superfamily signature | 206 | 221 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | ProSitePatterns | Peroxidases active site signature. | 431 | 442 | IPR019794 | GO:0004601 | |
Lsi11g01469 | 698 | Gene3D | - | 403 | 698 | - | - | |
Lsi11g01469 | 698 | CDD | secretory_peroxidase | 399 | 697 | IPR033905 | GO:0004601|GO:0042744 | |
Lsi11g01469 | 698 | Gene3D | - | 51 | 344 | - | - | |
Lsi11g01469 | 698 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 558 | 568 | IPR019793 | - | |
Lsi11g01469 | 698 | ProSitePatterns | Peroxidases active site signature. | 79 | 90 | IPR019794 | GO:0004601 | |
Lsi11g01469 | 698 | PANTHER | PEROXIDASE | 381 | 697 | - | - | |
Lsi11g01469 | 698 | CDD | secretory_peroxidase | 48 | 344 | IPR033905 | GO:0004601|GO:0042744 | |
Lsi11g01469 | 698 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 206 | 216 | IPR019793 | - | |
Lsi11g01469 | 698 | PRINTS | Plant peroxidase signature | 557 | 569 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Plant peroxidase signature | 491 | 501 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Plant peroxidase signature | 409 | 428 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Plant peroxidase signature | 433 | 453 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Plant peroxidase signature | 472 | 485 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Plant peroxidase signature | 510 | 525 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Plant peroxidase signature | 631 | 648 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Plant peroxidase signature | 615 | 630 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01469 | 698 | PRINTS | Plant peroxidase signature | 672 | 685 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g02513 | Lsi-Chr2:31592043 | Lsi11g01469 | Lsi-Chr11:23252468 | 4.46E-85 | dispersed | |
Lsi02g02514 | Lsi-Chr2:31606023 | Lsi11g01469 | Lsi-Chr11:23252468 | 1.70E-91 | dispersed | |
Lsi11g01469 | Lsi-Chr11:23252468 | Lsi11g01470 | Lsi-Chr11:23267623 | 1.12E-99 | tandem | |
Lsi01g02037 | Lsi-Chr1:28112257 | Lsi11g01469 | Lsi-Chr11:23252468 | 1.53E-29 | transposed | |
Lsi02g00534 | Lsi-Chr2:4638067 | Lsi11g01469 | Lsi-Chr11:23252468 | 1.18E-76 | transposed | |
Lsi03g00127 | Lsi-Chr3:1773109 | Lsi11g01469 | Lsi-Chr11:23252468 | 3.23E-49 | transposed | |
Lsi09g01386 | Lsi-Chr9:21880522 | Lsi11g01469 | Lsi-Chr11:23252468 | 1.30E-103 | transposed | |
Lsi11g01605 | Lsi-Chr11:24387031 | Lsi11g01469 | Lsi-Chr11:23252468 | 8.59E-65 | transposed | |
Lsi10g00150 | Lsi-Chr10:2437499 | Lsi11g01469 | Lsi-Chr11:23252468 | 7.02E-126 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01469 | - | K00430 | egu:105052151 | 731.865 |