Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01470 | ATGGAGCTCTTTCGTTGTCTTGTCTTTCTAATTGTATGTGTTTTAGGACTTGCTAGCTCAGGCCAAGCTCAGCTAGAGCTTGGGTACTATGCAAAGAGTTGTCCTCGTGCCGAGAAAATCGTCTACGATTACGTCTACAAGAACATTCCCAAAGTTCCTAGTTTGGCCGCTGCCTTACTTAGAATGCATTTCCATGATTGCTTCGTTCAGGGTTGTGATGCGTCTGTGCTTCTAAACTCAACTGCCAGCAACCAAAGTGAGAAAGTGTCTCCACCAAATCTATCATTGAGAGGCTTTGACTTCATTGATAAAATTAAGAAACTTTTGGAAGCTGAGTGCCCTGGAATCGTCTCATGCGCGGACATTATTTCTCTAGTGGCAAGAGACTCCGTTGTTGCCATCGGCGGTCCATTTTGGAGGGTTCCGACCGGAAGAAGAGACGGTCTGATCTCAAAATTCTCAGAAGCTTTGGTAAACATTCCTCCACCGTTTGCCAACTTGTCAACTCTACAACAACAGTTCGCTAATAAGGGTCTTGATCTCAAAGACCTAGTTTTACTTTCAGACCCATCACTCGACAGCCAATACGCGGCAAATCTCAAGGCAAAGAAATGCAAAAGCATTAGCGCCAATGGCCTAGTGGAAATGGACCCTGGCAGTTTCAGAACCTTCGATCTCAGCTACTACTCCCTTCTTTTGAAGCGCCGAGGGCTGTTCCAGTCCGACGCGGCTTTGACCACCAGCGCAGCCACCAAGGCCTTCGTCACCGACCTGCTCAATGGCTCCGTTCAGAACTTCTTCGCCCAGTTTGGGTTAGCCATGGAGAAGATGGGTCGGATCGGGGTCAAGACTGGGTCCGAGGGTGAGATTCGCAACCACTGCGCTCTTGTAAATGCCTAG | 900 | 48.33 | MELFRCLVFLIVCVLGLASSGQAQLELGYYAKSCPRAEKIVYDYVYKNIPKVPSLAAALLRMHFHDCFVQGCDASVLLNSTASNQSEKVSPPNLSLRGFDFIDKIKKLLEAECPGIVSCADIISLVARDSVVAIGGPFWRVPTGRRDGLISKFSEALVNIPPPFANLSTLQQQFANKGLDLKDLVLLSDPSLDSQYAANLKAKKCKSISANGLVEMDPGSFRTFDLSYYSLLLKRRGLFQSDAALTTSAATKAFVTDLLNGSVQNFFAQFGLAMEKMGRIGVKTGSEGEIRNHCALVNA | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23267623 | 23269234 | + | Lsi11G014700.1 | Lsi11g01470 | 674637 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01470 | 299 | Pfam | Peroxidase | 49 | 257 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601 | |
Lsi11g01470 | 299 | Gene3D | Peroxidase, domain 2 | 190 | 277 | - | - | |
Lsi11g01470 | 299 | Gene3D | Peroxidase, domain 2 | 161 | 188 | - | - | |
Lsi11g01470 | 299 | Gene3D | - | 278 | 298 | - | - | |
Lsi11g01470 | 299 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PRINTS | Plant peroxidase signature | 231 | 248 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PRINTS | Plant peroxidase signature | 135 | 150 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PRINTS | Plant peroxidase signature | 272 | 285 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PANTHER | PEROXIDASE 25-RELATED | 189 | 298 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PANTHER | PEROXIDASE | 189 | 298 | - | - | |
Lsi11g01470 | 299 | PANTHER | PEROXIDASE | 12 | 188 | - | - | |
Lsi11g01470 | 299 | PRINTS | Haem peroxidase superfamily signature | 117 | 134 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PRINTS | Haem peroxidase superfamily signature | 217 | 232 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PRINTS | Haem peroxidase superfamily signature | 135 | 147 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 298 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | Gene3D | - | 29 | 160 | - | - | |
Lsi11g01470 | 299 | CDD | secretory_peroxidase | 24 | 297 | IPR033905 | GO:0004601|GO:0042744 | |
Lsi11g01470 | 299 | SUPERFAMILY | Heme-dependent peroxidases | 24 | 298 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01470 | 299 | PANTHER | PEROXIDASE 25-RELATED | 12 | 188 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi10g00150 | Lsi-Chr10:2437499 | Lsi11g01470 | Lsi-Chr11:23267623 | 1.60E-150 | dispersed | |
Lsi11g01470 | Lsi-Chr11:23267623 | Lsi03g00774 | Lsi-Chr3:11036102 | 2.66E-75 | dispersed | |
Lsi11g01469 | Lsi-Chr11:23252468 | Lsi11g01470 | Lsi-Chr11:23267623 | 1.12E-99 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01470 | K00430 | - | pop:7491786 | 394.43 |