Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi11g01501 ATGTTTGCAGTTGGTCCGAGCAACGGCCGACTCCACTGCAACTCACCGAATCCGCTCCTCCCTCCGCCGGCGACAGGCGCATCCGTACGGTACAAGGATGTGTTTCTGAAAAGATGTTTCAAGCCCAGCCAAGTGGTTATACCCCAATGTCGTCGGTTGGGTTCAGCTAACTTGAACACAAAACTTGTTTTATCTATTAGCAATACTAAACAAGAACCTTGTAAAGAACTGAAGTTTTCTTCTTCTAGAGGAATGTTGATATCAAAAATTTCTGCAGCAGCATCCCCACATCTATCTGGGGAACAAGGCAGTCTATTCCACAAACTTCCACTTTTACCTCCACAAAATTGTACTGGAAAGAGTCCTCGAGCATTCAGAGACGATTCTTACAGTATCAAACGCCATTCTGGGGTCATCCAAAAACCAGAATGGTGGTGGAGGACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTTCCTCTTGCCCTTGTTGGAACACTTGGACGTTGATAATTTGATATTTTATGTCCCCGGATCCGTTCAGAAGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTCGCATACTTTGGAGTCGTGAGGAATAAAGAGTGGCCTCATTTCATTCGGTTCCATGTCATGATGGGTATGTTATTAGAAACCTCTCTCGACATCATATGGTATGCAAGCAATTTCATGCCACTCATACATTACAATGGTACATATGCAATGCAATATTGGGCAGCAGTGGGGTTCATCTACATTTCCATCTTGTTGGTGTGTATAAGGAGTTCTCTCTTGGGGACTTATGCCAAAATACCATTCATTTCTGAAAACGCACTTATTCATACATTCTTTAGTATAGGACGATATTATCGACCATTCTAG 909 43.12 MFAVGPSNGRLHCNSPNPLLPPPATGASVRYKDVFLKRCFKPSQVVIPQCRRLGSANLNTKLVLSISNTKQEPCKELKFSSSRGMLISKISAAASPHLSGEQGSLFHKLPLLPPQNCTGKSPRAFRDDSYSIKRHSGVIQKPEWWWRTLACVPYLMALQMSSTAYFLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKEWPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFISENALIHTFFSIGRYYRPF 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 23476118 23478495 - Lsi11G015010.1 Lsi11g01501 674668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi11g01501 302 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 53 302 IPR005691 -
Lsi11g01501 302 Pfam Chloroplast import apparatus Tic20-like 123 287 IPR005691 -
Lsi11g01501 302 PANTHER PROTEIN TIC 20-IV, CHLOROPLASTIC 53 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi09g01663 Lsi-Chr9:25043799 Lsi11g01501 Lsi-Chr11:23476118 5.21E-61 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi11g01501 - - cmax:111468245 520.776