Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01569 | ATGGCTTCCACTAAAGAACGCGAGAACTTCGTTTACATCGCTAAGCTCGCCGAGCAGGCCGAGCGTTATGATGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTCGAATTGACAGTTGAGGAAAGAAACTTACTTTCTGTTGGGTACAAGAATGTGGTTGGTGCACGGCGAGCCTCATGGAGGATCTTATCGTCAATAGAGCAGAAAGAAGAGGCTAAAGGAAATGAAACAAATGCTAAACGCATCAAAGAATACAGACAAAAGGTTGAATCAGAGCTCTCTGGTATTTGTAATGATATCATGACAGTGATTGACGAGCATCTAATTCCCTCGGCTTCAGCTGGGGAATCAACAGTATTCTACTATAAGATGAAAGGAGACTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCATATGAGGCTGCAACCAGCTCAGCCGAATCTGAGTTACCCCCTACACATCCTATCCGCTTGGGGTTGGCATTAAATTTCTCTGTCTTCTACTATGAAATCTTGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCTTTTGATGAAGCCATTTCCGAACTTGACACCCTGAATGAAGAGTCATACAAAGATAGCACCCTAATCATGCAGCTTCTTAGGGACAACCTTACATTATGGACTTCTGACATCCCAGAAGATGGAGATGATGCCCAAAAGATCAATGGCACTACCAAGGTTTCTGGTGGTGACGATGCCGAGGTGAGTAGCTCAAACCGTTGGTTGCAGTTAGTCAATCACGTTTGA | 828 | 43.48 | MASTKERENFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNETNAKRIKEYRQKVESELSGICNDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKINGTTKVSGGDDAEVSSSNRWLQLVNHV | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23995462 | 23998460 | - | Lsi11G015690.1 | Lsi11g01569 | 674736 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01569 | 275 | Coils | Coil | 13 | 33 | - | - | |
Lsi11g01569 | 275 | SMART | 1433_4 | 7 | 248 | IPR023410 | - | |
Lsi11g01569 | 275 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
Lsi11g01569 | 275 | ProSitePatterns | 14-3-3 proteins signature 2. | 217 | 236 | IPR023409 | - | |
Lsi11g01569 | 275 | PANTHER | 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED | 4 | 246 | - | - | |
Lsi11g01569 | 275 | SUPERFAMILY | 14-3-3 protein | 6 | 237 | IPR036815 | - | |
Lsi11g01569 | 275 | PANTHER | 14-3-3 PROTEIN | 4 | 246 | IPR000308 | - | |
Lsi11g01569 | 275 | Coils | Coil | 195 | 215 | - | - | |
Lsi11g01569 | 275 | Pfam | 14-3-3 protein | 14 | 235 | IPR023410 | - | |
Lsi11g01569 | 275 | Gene3D | - | 1 | 249 | IPR036815 | - | |
Lsi11g01569 | 275 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
Lsi11g01569 | 275 | PRINTS | 14-3-3 protein zeta signature | 208 | 237 | IPR000308 | - | |
Lsi11g01569 | 275 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
Lsi11g01569 | 275 | PRINTS | 14-3-3 protein zeta signature | 181 | 207 | IPR000308 | - | |
Lsi11g01569 | 275 | PRINTS | 14-3-3 protein zeta signature | 154 | 180 | IPR000308 | - | |
Lsi11g01569 | 275 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
Lsi11g01569 | 275 | PIRSF | 14-3-3 | 1 | 247 | IPR000308 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi04g02235 | Lsi-Chr4:29388901 | Lsi11g01569 | Lsi-Chr11:23995462 | 7.29E-133 | dispersed | |
Lsi07g00987 | Lsi-Chr7:13570780 | Lsi11g01569 | Lsi-Chr11:23995462 | 4.10E-126 | dispersed | |
Lsi08g00896 | Lsi-Chr8:17327349 | Lsi11g01569 | Lsi-Chr11:23995462 | 5.15E-125 | dispersed | |
Lsi08g00980 | Lsi-Chr8:18276685 | Lsi11g01569 | Lsi-Chr11:23995462 | 4.79E-126 | dispersed | |
Lsi08g01039 | Lsi-Chr8:18981438 | Lsi11g01569 | Lsi-Chr11:23995462 | 5.26E-86 | dispersed | |
Lsi11g01569 | Lsi-Chr11:23995462 | Lsi08g00966 | Lsi-Chr8:18146289 | 2.71E-146 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01569 | K06630 | - | csv:101208446 | 498.819 |