Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01574 | ATGGCGTCCATTATTTCTCATCTTTTCATTGTTCTTTCCCTTTTAGCTTTCTCAACCAATGCTCAACTCTCATCTAGCTTCTACTCAAAAACCTGTCCCAGACTCGAATCAATTGTTCGTGCTGGTATGACCAAAGCTGTTAATAAAGAAAAACGTATCGGAGCTTCCATCCTTCGTTTGTTCTTCCACGACTGCTTCGTAAATGGTTGTGATGGTTCTATATTACTTGATGATACTCCAACATTTACGGGTGAAAAAAATGCATTTCCAAACCGAAACTCAGCTAGAGGGTTCGAAGTAATTGATGACATTAAAACTCAAGTCGAAGCTGCTTGCAATGTCACTGTTTCCTGTGCTGATATTCTTGCTCTTGCCACTCGTGATGGGGTCTTTCTGCTTGGAGGGCCAAATTGGATTGTACCACTCGGTCGAAGGGATTCGAGAACAGCGAGCGAGAGTGGAGCGAACAACAACCTTCCAGGACCAAGCTCCGACCTCTCGACACTCATCTCATTATTCGCCGCTCAAGGCCTCAACACCCGAGAAATGACAGCCCTCTCCGGTGCTCACACCATAGGCAATGGCCAATGTCAATTCTTCCGAACTCGCATCTACAACGAAACCAACATCGATCCCACCTTTGCGGCCCAGCGGCGAGCCAACTGTCCGTTCAATGGCGGCGACGCCAACTTGGCCCCTCTTGACTCAACCAACACTTTGTTTGACAACAAATATTACGTAGACCTAACTAATAAGCGTGGCCTGTTTCATTCGGACCAACAACTCTTCAACGGCGGTTCACAAGATGCGTTGGTTCGAACCTATAGTACAAATGTCAACACCTTTAAATCGGATTTTGTAAATGCGATGATCAAGATGGGGAATCTCGGTCCTGCGAGTGGAACCATCACCGAGATTAGAAAAAATTGCAGGGTGGTGAATTAA | 945 | 45.93 | MASIISHLFIVLSLLAFSTNAQLSSSFYSKTCPRLESIVRAGMTKAVNKEKRIGASILRLFFHDCFVNGCDGSILLDDTPTFTGEKNAFPNRNSARGFEVIDDIKTQVEAACNVTVSCADILALATRDGVFLLGGPNWIVPLGRRDSRTASESGANNNLPGPSSDLSTLISLFAAQGLNTREMTALSGAHTIGNGQCQFFRTRIYNETNIDPTFAAQRRANCPFNGGDANLAPLDSTNTLFDNKYYVDLTNKRGLFHSDQQLFNGGSQDALVRTYSTNVNTFKSDFVNAMIKMGNLGPASGTITEIRKNCRVVN | 314 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 24075599 | 24079871 | + | Lsi11G015740.1 | Lsi11g01574 | 674741 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01574 | 314 | PRINTS | Haem peroxidase superfamily signature | 134 | 146 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Haem peroxidase superfamily signature | 182 | 197 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Haem peroxidase superfamily signature | 116 | 133 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Haem peroxidase superfamily signature | 234 | 249 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Haem peroxidase superfamily signature | 54 | 68 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | Gene3D | - | 27 | 311 | - | - | |
Lsi11g01574 | 314 | Pfam | Peroxidase | 39 | 277 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | CDD | secretory_peroxidase | 22 | 313 | IPR033905 | GO:0004601|GO:0042744 | |
Lsi11g01574 | 314 | PRINTS | Plant peroxidase signature | 181 | 193 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Plant peroxidase signature | 115 | 125 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Plant peroxidase signature | 134 | 149 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Plant peroxidase signature | 248 | 265 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Plant peroxidase signature | 96 | 109 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Plant peroxidase signature | 232 | 247 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Plant peroxidase signature | 56 | 76 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Plant peroxidase signature | 32 | 51 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PRINTS | Plant peroxidase signature | 288 | 301 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | SUPERFAMILY | Heme-dependent peroxidases | 22 | 314 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PANTHER | PEROXIDASE | 15 | 314 | - | - | |
Lsi11g01574 | 314 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 182 | 192 | IPR019793 | - | |
Lsi11g01574 | 314 | ProSitePatterns | Peroxidases active site signature. | 54 | 65 | IPR019794 | GO:0004601 | |
Lsi11g01574 | 314 | ProSiteProfiles | Plant heme peroxidase family profile. | 22 | 314 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | PANTHER | PEROXIDASE 72-RELATED | 15 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g01574 | 314 | Gene3D | Peroxidase, domain 2 | 160 | 293 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi10g01471 | Lsi-Chr10:18840896 | Lsi11g01574 | Lsi-Chr11:24075599 | 4.29E-91 | dispersed | |
Lsi11g00024 | Lsi-Chr11:252005 | Lsi11g01574 | Lsi-Chr11:24075599 | 2.42E-118 | dispersed | |
Lsi11g01574 | Lsi-Chr11:24075599 | Lsi01g00641 | Lsi-Chr1:5166953 | 5.28E-105 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01574 | K00430 | - | csv:101208932 | 569.311 |