Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi11g01609 ATGAAAAAATTGACCTATAATTGCGCGCCTCCTTCTCACTCTCATTCTCGATTTTCTTCGCAAGCCACGACGCTAGCCACCTCCATCGAACAGCTCGCGCCGCCAGCCGCTCCGACCTCCTGCCCCCCGTCGTTCTCTCCGGCCATCCCTCGCGCCGCCGTCGTCTCCGCCCAACAGCTCACACCACCGCCGCCAGCGGACCATCGCCTGAATGGGATGCCTACGGACAAAGGAAAAAGAAAAAACACTAACGTAATTCTACCGCCGGAGCTTCCACCAGAGGTTACTGAGGAAGAAATTGAGGTCTCCGATGAGGACTTGGAGTTTGTTAAGGAGAATCAAGACTATGCCGTCTCTGTTTCCCGTCTAGACACTAAATCCATAACCAAGCATGTTACACGGGTTGCTAATGTTGACGATGATGCTTTGGAGGTTCTATACGAGAAGCGTCTGCGCAAGAAGCCAGTGCAGAATCAGGAGGAGGAAAATAAGCTCCAGGTTGATCGTGTGGATGCTCTTCCTGTAGATAATGGTGTAATGAAGTTAACTAAAGCAGAAAGGAGGGCAAAGCAAAAGAAAATTAAGAAGATTGCCAAGAAACAAGAGGACGTAACTCAAGCTGAAGAAGTTCAACCAACCTCACAAGCTGCAGTTTTGGTCGAAGTGGCAGAAGATCTTAATGCTGAAGAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGCGTTGCTGGCAGACCCAAATTCCAATATTAAATCTCTGAAGGAGATGCTGCAGATTGCTAAGGATAATGATCAAGCAATTGTGAAACTTGGACTTCTATCATTATTGGCTGTTTTTAAAGACATTATACCTGGTTATCGGATTCGGCTTCCAACAGAAAAGGAGCTAGAAATTAAAGTGTCCAAGGATGTCAAGAAAATGCGGTACTATGAGTCTACTCTTCTTACTGTCTATAAGGGATACCTGCAGAAGCTGATGTCATTAGAAAAATTGCCGTCATTTCAGCATGTTGTTATTCGCTGTATATGTACATTGCTTGATGCAGTTCCCCACTTCAACTTTCTCGAGACATTGTTAGGTATCGTTGTTAAAAACATAAGCTCCCCTGATGATGTTGTAAGAAAACTTTGTTGTGGTGCTATTAAGTCTTTATTTATCAATGAGGGAAAGCATGGCGGTGAAGCGACCGTGGAGGCCGTCCGGTTGATTGCTGATCATGTGAAATATCACGACTGCCAATTACATCCTGATTCCATCCAGTCTTTTGTACATCTAACATTTGACGAGGATCTGAGAAAAGCAGAAAAGCAAGACGAGCATAGTAAAGTAAAGAACAAAAAACACAGGAAAATAAAGAATCGTGAGGAATCAAGTCATTTGCAAGGGAATGATGGAAGACAAAGTATGAGGACGAAGTTTACTGAAGAGGTTGCTGCTGATTACAGGGCTGCTTCTCTTGCTCCAGATGTAATGAAGCAAAGAGAGATGCAGTCAGATACACTTTCTGCCGTGTTTGAAACATATTTCCGAATCTTAAGGCATACAATGCAGTCATTAACTGCTAGAGGGTGGACGTTGTTTCTTTTTTCTTCAAACAATTCAGTCTTTCAGAAAAATGTCCAAGGTACAGAACTAAACAAGAGCAAAGCAAACCGTTTGTTTGTTTCAGTTCAGTTCCTTTTTCTTAAGCTTAATGCCAACGGGAAACTGATTTTAAAAGTTAAATCGATCGATCATTGTAAGCCCCAGCCTGAAGCAAGTAGTGCTCCATCTACTACTAGTCCATCTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGGTTGGGAAAATTCTCGCATCTCATCGATTTAGATTTCATGGGAGATCTTATGAATTATTTAAAAAGGCTTGCTTCTGGTGGTGACAATTCTTCTGAGAAACAGTCACAATGTTTGACTGTGTCTGAGCGTCTTCAGTGTTGCATTGTGGCATTTAAAGTAATGAGGAAAAACCTTGATGCTTTGAATGTTGATCTTCAGGACTTCTTTGTCCAGCTATACAATATGCTACTTGAGTACAGGCCTGGGAGAGATCAAGGTGGATTGTTAGCCGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGGCTACTTTCTCATTATGCTTTGGATCTGCAGAGTCGTTGGCAGCCTTGGTCACCGTAAGGCATCTTCTTCAGAAAAATGTTAAGTGTCGCAACCTTTTGGAAAACGATGCTGGTGGAGGTTCGGTGTCCGGCTCTATTGCGAAATATCAGCCATACGCCTCTGATCCAAATTTGAGTGGCGCTCTTGCTTCTGTCCTTTGGGAACTTAATCTTCTGTGGAAGCATTATCATCCAGCTGTCTCAACGATGGCTGCTAGCATATCAAACATGAATAGTGCTCAAAATCAAGTATATATCTCCACTGTTTCTCCCCAACAAGCATTCAAAGACTTGTCGCTGGAACAGGAGTCTTTCAACCCACAATTTAATGCCCGAAAAGTTAACAAGAGGAAAAGAGCTACTGAATCTTCCCAGTCTACTCTCGATACTTGCGGCACCATCGACGAAAATGAAGTGAAGGAGAAACTCTCAACAAGATTCTTTCTTCTCCGGGACATCAAGGACAATGAAAGGTTGAGGACTGAATTAGAACGCACCACTTTGTCTTTGCAGCTATATGAAGAATACAAAAGGCAAAAGAGAAAAACTAAAAAGTCTAGGAATGTTTAG 2790 42.9 MKKLTYNCAPPSHSHSRFSSQATTLATSIEQLAPPAAPTSCPPSFSPAIPRAAVVSAQQLTPPPPADHRLNGMPTDKGKRKNTNVILPPELPPEVTEEEIEVSDEDLEFVKENQDYAVSVSRLDTKSITKHVTRVANVDDDALEVLYEKRLRKKPVQNQEEENKLQVDRVDALPVDNGVMKLTKAERRAKQKKIKKIAKKQEDVTQAEEVQPTSQAAVLVEVAEDLNAEETFESKKQKLAELGIALLADPNSNIKSLKEMLQIAKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEIKVSKDVKKMRYYESTLLTVYKGYLQKLMSLEKLPSFQHVVIRCICTLLDAVPHFNFLETLLGIVVKNISSPDDVVRKLCCGAIKSLFINEGKHGGEATVEAVRLIADHVKYHDCQLHPDSIQSFVHLTFDEDLRKAEKQDEHSKVKNKKHRKIKNREESSHLQGNDGRQSMRTKFTEEVAADYRAASLAPDVMKQREMQSDTLSAVFETYFRILRHTMQSLTARGWTLFLFSSNNSVFQKNVQGTELNKSKANRLFVSVQFLFLKLNANGKLILKVKSIDHCKPQPEASSAPSTTSPSGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGGDNSSEKQSQCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNMLLEYRPGRDQGGLLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESLAALVTVRHLLQKNVKCRNLLENDAGGGSVSGSIAKYQPYASDPNLSGALASVLWELNLLWKHYHPAVSTMAASISNMNSAQNQVYISTVSPQQAFKDLSLEQESFNPQFNARKVNKRKRATESSQSTLDTCGTIDENEVKEKLSTRFFLLRDIKDNERLRTELERTTLSLQLYEEYKRQKRKTKKSRNV 929
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24423123 24437414 + Lsi11G016090.1 Lsi11g01609 674776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi11g01609 929 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 79 874 IPR016903 -
Lsi11g01609 929 SUPERFAMILY ARM repeat 257 710 IPR016024 -
Lsi11g01609 929 MobiDBLite consensus disorder prediction 440 471 - -
Lsi11g01609 929 Pfam Nucleolar complex-associated protein 235 325 IPR011501 -
Lsi11g01609 929 MobiDBLite consensus disorder prediction 9 23 - -
Lsi11g01609 929 MobiDBLite consensus disorder prediction 59 90 - -
Lsi11g01609 929 Coils Coil 182 210 - -
Lsi11g01609 929 MobiDBLite consensus disorder prediction 1 23 - -
Lsi11g01609 929 Pfam CBF/Mak21 family 656 811 IPR005612 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi11g01609 K14834 - jre:109001766 947.192