Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01699 | ATGGCAGATTCATCACACCATTCATCAGTGTTTCAGAAGATATGTAGCCATTCTCACCTCACTTCCAGGCTTTCCCCTGGCCTTCACTCCGCACGTTATAGTACAACAGGTGTATATGCTAATGGGGTTTTGGAGAATCCCTTAAAGACAGCTTATCATGGGACTGGCTTGGCTGGAGTTTCACCCACTTCTCCTCTTCTTGTACAAGCTCCTTCTGAGAAAGGTGCAGCTGGCTTTGCTGTGGATTTTCTTATGGGAGGAGTATCTGCTGCTGTTTCTAAAACAGCTGCTGCTCCAATTGAGCGTGTCAAACTGCTGATCCAAAATCAGGATGAGATGCTTAAGACTGGTAGGCTATCTGAGCCATACAAAGGAATTACTGACTGCTTTGCCCGTACAATTAAAGATGAAGGAGTCATTTCTCTATGGAGGGGAAACACTGCAAATGTTATCAGATACTTTCCCACACAAGCTTTGAATTTTGCCTTCAAGGATTACTTCAAGAGGCTGTTCAACTTCAAGAAAGATAGAGATGGTTACTGGAAATGGTTTGCTGGGAATTTGGCCTCTGGTGGTGCTGCTGGTGCTTCATCTCTTTTATTTGTTTATTCCCTTGATTATGCTAGAACTCGTCTGGCTAATGATGCTAAGGCTGCTAAAAAGGGTGGTGAGAGGCAGTTTAATGGTCTTGTTGATGTTTACAAGAAAACCCTTAAATCTGATGGCGTTGCTGGACTGTATCGTGGATTTAACATCTCTTGTGTTGGAATTATTGTGTACCGTGGTCTTTACTTTGGAATGTATGATTCAATGAAGCCCGTGGTTTTGGTTGGCGATTTGCAGGATAGTTTCGTTGCTAGTTTCTTGCTTGGATGGTGTATCACAATAGGAGCAGGTTTGGCTTCTTACCCAATTGACACCGTCCGAAGAAGAATGATGATGACCTCAGGCGAAGCAGTCAAGTATAATAGCTCCTTGGACGCATTCAAACAGATCGTCAAGAATGAGGGTACTAAGTCTCTCTTCAAGGGTGCTGGGGCAAACATTCTGCGTGCCGTTGCCGGTGCTGGTGTGTTGGCTGGGTATGATAAGCTTCAGCTCCTTGTTCTTGGCAAGAAATATGGTTCCGGTGGTGGTGGTTAA | 1143 | 44.44 | MADSSHHSSVFQKICSHSHLTSRLSPGLHSARYSTTGVYANGVLENPLKTAYHGTGLAGVSPTSPLLVQAPSEKGAAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSEPYKGITDCFARTIKDEGVISLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSMKPVVLVGDLQDSFVASFLLGWCITIGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQIVKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLLVLGKKYGSGGGG | 380 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25167552 | 25170933 | - | Lsi11G016990.1 | Lsi11g01699 | 674866 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01699 | 380 | PRINTS | Adenine nucleotide translocator signature | 287 | 303 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Lsi11g01699 | 380 | PRINTS | Adenine nucleotide translocator signature | 123 | 144 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Lsi11g01699 | 380 | PRINTS | Adenine nucleotide translocator signature | 182 | 195 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Lsi11g01699 | 380 | PRINTS | Adenine nucleotide translocator signature | 79 | 91 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Lsi11g01699 | 380 | PRINTS | Adenine nucleotide translocator signature | 156 | 168 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Lsi11g01699 | 380 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 286 | 368 | IPR018108 | - | |
Lsi11g01699 | 380 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 77 | 170 | IPR018108 | - | |
Lsi11g01699 | 380 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 22 | 379 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Lsi11g01699 | 380 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 182 | 274 | IPR018108 | - | |
Lsi11g01699 | 380 | Gene3D | Mitochondrial carrier domain | 80 | 375 | IPR023395 | - | |
Lsi11g01699 | 380 | Pfam | Mitochondrial carrier protein | 181 | 274 | IPR018108 | - | |
Lsi11g01699 | 380 | Pfam | Mitochondrial carrier protein | 78 | 174 | IPR018108 | - | |
Lsi11g01699 | 380 | Pfam | Mitochondrial carrier protein | 283 | 369 | IPR018108 | - | |
Lsi11g01699 | 380 | PRINTS | Mitochondrial carrier protein signature | 145 | 165 | IPR002067 | GO:0055085 | |
Lsi11g01699 | 380 | PRINTS | Mitochondrial carrier protein signature | 82 | 95 | IPR002067 | GO:0055085 | |
Lsi11g01699 | 380 | PRINTS | Mitochondrial carrier protein signature | 291 | 313 | IPR002067 | GO:0055085 | |
Lsi11g01699 | 380 | PRINTS | Mitochondrial carrier protein signature | 247 | 265 | IPR002067 | GO:0055085 | |
Lsi11g01699 | 380 | PRINTS | Mitochondrial carrier protein signature | 95 | 109 | IPR002067 | GO:0055085 | |
Lsi11g01699 | 380 | PRINTS | Mitochondrial carrier protein signature | 197 | 215 | IPR002067 | GO:0055085 | |
Lsi11g01699 | 380 | PANTHER | ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE | 22 | 379 | - | - | |
Lsi11g01699 | 380 | SUPERFAMILY | Mitochondrial carrier | 78 | 364 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi08g01484 | Lsi-Chr8:23002042 | Lsi11g01699 | Lsi-Chr11:25167552 | 0 | dispersed | |
Lsi08g01485 | Lsi-Chr8:23007388 | Lsi11g01699 | Lsi-Chr11:25167552 | 0 | dispersed | |
Lsi08g01587 | Lsi-Chr8:23875337 | Lsi11g01699 | Lsi-Chr11:25167552 | 2.55E-62 | dispersed | |
Lsi11g01699 | Lsi-Chr11:25167552 | Lsi08g01591 | Lsi-Chr8:23897733 | 1.00E-32 | dispersed | |
Lsi11g01699 | Lsi-Chr11:25167552 | Lsi01g01544 | Lsi-Chr1:13564225 | 4.90E-27 | transposed | |
Lsi11g01699 | Lsi-Chr11:25167552 | Lsi04g00916 | Lsi-Chr4:9249857 | 5.90E-28 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01699 | K05863 | - | csv:101212128 | 684.485 |