Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01715 | ATGGCTAGACAGTCGCAAAATGAAGAGTGGAAGATCTGCGGCCAAAGTTTTGATTTTGGATGGATGCAGATTGCCGAACCTGTTATGAAACTGTATACCGAGGCTACAGATGGTTCTTCTATTGAAAGAAAGGAAAGTGCTTTGGTCTGGCAGTATCGAGATGCAGATCCTGGTTTTGGATCGTCCCAGGCAAAGGAGATGTTGGATCATTTAGAGAGTGTTTTGGCAAACGAACCTGTTGCAGTCAAAAGCGGCCAATTTATTGTAGAAGTGAAACCACAGGGGGTTACCAAAGGCCTAGTGGCTGAAAAGATCTTCTCATCAATGGCGGAGGATGGAAAGCTTGCTGACTTTGTGTTGTGTATCGGTGACGACAGATCTGATGAGGACATGTTTGAAATAATTGGTAATGTGTTGTCCAGTAACATTATTTCTCCAACAACATCGGTTTTTGCCTGCACTGTTGGACAAAAGCCAAGTAAAGCCAAATATTATTTAGATGACACAACTGAAGTAATAAGCATGCTTGAATACCTGGCTGAAGCTTCTAGCCCATTGCCATCCTCTGACGATGAAGAAGGTGAAAATGCTTCTTGA | 597 | 42.88 | MARQSQNEEWKICGQSFDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADPGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVTKGLVAEKIFSSMAEDGKLADFVLCIGDDRSDEDMFEIIGNVLSSNIISPTTSVFACTVGQKPSKAKYYLDDTTEVISMLEYLAEASSPLPSSDDEEGENAS | 198 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25256976 | 25258474 | - | Lsi11G017150.1 | Lsi11g01715 | 674882 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01715 | 198 | PANTHER | ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED | 2 | 192 | - | - | |
Lsi11g01715 | 198 | SUPERFAMILY | HAD-like | 6 | 180 | IPR036412 | - | |
Lsi11g01715 | 198 | Pfam | Trehalose-phosphatase | 3 | 169 | IPR003337 | GO:0003824|GO:0005992 | |
Lsi11g01715 | 198 | TIGRFAM | T6PP: trehalose-phosphatase | 18 | 180 | IPR003337 | GO:0003824|GO:0005992 | |
Lsi11g01715 | 198 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 2 | 192 | IPR001830 | GO:0003824|GO:0005992 | |
Lsi11g01715 | 198 | Gene3D | - | 59 | 192 | IPR023214 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi06g01540 | Lsi-Chr6:25744451 | Lsi11g01715 | Lsi-Chr11:25256976 | 3.73E-74 | dispersed | |
Lsi11g01715 | Lsi-Chr11:25256976 | Lsi04g00531 | Lsi-Chr4:4900865 | 2.99E-82 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01715 | K16055 | - | csv:101209914 | 382.104 |