Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch10g0022 | GACGAGGAAGCCCACCTGTTCGCGATGCAATTGGCCAGCGCCTCGGTTCTTCCGATGGTGCTGAAGGCCGCCATTGAGCTGGACGTGCTTGAGATCGTAGCCAGAGCTGGGCCCGGGGCTCTGCTCTCCCCCTCCCAAATCGCCGCTCAGCTTCCGGCGGTCACAAACCCTCACGCGGATGTCGCACTGGACCGCATCTTGCGCCTCCTCGCCAGCTACTCCATCCTCACCTGCTCCCTCAGAACCCACCCCGATGGCACACCCCAGAGGCTCTACGGCCTCGCCCCTGTCTGCAAGTTCTTGACCAACAACCAAGATGGCGTCTCTATTGCCCCGCTTTGTCTCATGAATCAGGACAAGGTCCTCATGGAGAGCTGGTACCATTTGAAGGATGCAGTAGTGGAAGGAGGGATTCCGTTCAACAGAGCATACGGAATGACGGCGTTCGATTACCATGGAACCGATCCCAGATTCAACAAGGTGTTCAACAGGGGAATGTCGGAGCATTCGAGCATCACCATGAAGAAGATTCTGGAGAGCTACAAAGGGTTCGAAGGGGTTTCTTCGGTGGTGGACGTGGGCGGTGGAACCGGAGCTGTTCTGAACATGATCGTTTCAAGGTACCCTTCTATTAGGGGCATCAACTTCGACTTGCCTCACGTCATTCAGGACGCTCCTCCATACCCAGGGGTCCAGCACCTTGGGGGCGACATGTTTGTGAGCGTCCCAAAGGGGGATGCTATTTTCATGAAGTGGATCTGTCACGATTGGAGTGACCAGCACTGCTTGAAGCTGTTGAAGAATTGCCACGACGCGCTGCCGGAGCATGGCAAGGTGATCGTGGCCGAATGCATTCTCCCCGTGGAACCAGACACCAGCCTCGCCACCAAGGGAGTCGTTCACATCGATGTCATAATGCTGGCTCACAACCCCGGAGGAAAAGAGAGAACCCAGAAGGAATTCCACGAATTGGCCAACGCCGCTGGATTTCAGGGCTTCAACCTCCACTGCTGTGCTTTCAACACTTATGTCATGGAATTTCTCAAGACT | 1050 | 55.71 | DEEAHLFAMQLASASVLPMVLKAAIELDVLEIVARAGPGALLSPSQIAAQLPAVTNPHADVALDRILRLLASYSILTCSLRTHPDGTPQRLYGLAPVCKFLTNNQDGVSIAPLCLMNQDKVLMESWYHLKDAVVEGGIPFNRAYGMTAFDYHGTDPRFNKVFNRGMSEHSSITMKKILESYKGFEGVSSVVDVGGGTGAVLNMIVSRYPSIRGINFDLPHVIQDAPPYPGVQHLGGDMFVSVPKGDAIFMKWICHDWSDQHCLKLLKNCHDALPEHGKVIVAECILPVEPDTSLATKGVVHIDVIMLAHNPGGKERTQKEFHELANAAGFQGFNLHCCAFNTYVMEFLKT | 350 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 138687 | 140148 | + | MC10g0019 | Mch10g0022 | 677115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch10g0022 | 350 | PANTHER | O-METHYLTRANSFERASE | 3 | 338 | IPR016461 | GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER) | |
| Mch10g0022 | 350 | SUPERFAMILY | Winged helix DNA-binding domain | 2 | 104 | IPR036390 | - | |
| Mch10g0022 | 350 | CDD | AdoMet_MTases | 190 | 281 | - | - | |
| Mch10g0022 | 350 | FunFam | Caffeic acid 3-O-methyltransferase | 1 | 101 | - | - | |
| Mch10g0022 | 350 | Gene3D | - | 1 | 101 | IPR036388 | - | |
| Mch10g0022 | 350 | Pfam | O-methyltransferase domain | 126 | 331 | IPR001077 | GO:0008171(InterPro) | |
| Mch10g0022 | 350 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 106 | 347 | IPR029063 | - | |
| Mch10g0022 | 350 | Gene3D | Vaccinia Virus protein VP39 | 102 | 349 | IPR029063 | - | |
| Mch10g0022 | 350 | PIRSF | O-mtase | 1 | 349 | IPR016461 | GO:0008168(InterPro) | |
| Mch10g0022 | 350 | FunFam | Caffeic acid O-methyltransferase | 102 | 349 | - | - | |
| Mch10g0022 | 350 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 9 | 349 | IPR016461 | GO:0008168(InterPro) | |
| Mch10g0022 | 350 | Pfam | Dimerisation domain | 19 | 71 | IPR012967 | GO:0046983(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g0022 | Mch-Chr10:138687 | Mch10g1421 | Mch-Chr10:13443865 | 6.90E-139 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch10g0022 | K13066 | - | csv:101204109 | 613.994 |