Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0037 ATGGCTGCTTTCGCCTCACTGACCCTGACTTCATCTTCATCTTCTTTACATCCTACTGTCCAAATCTCACCTCTTGTACTCTCCTCAAAATTTCTTTATGACCCAAGTTCCTATCGCCCCACAGTTGGATCATTCAGACATGCAAAGCAAAAATTTGCCCCTCAGACCAATCCAAGGAGCCTCATAATCCTTGGTGCAGCAACAAAACAAGCAAAAACACCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAAGTTCTGCTGCAGAAAAGGGTAAGGAGTGTTGACGCGAATGAAGCTCTGCGCCTTCAGAAGGAAAATAACTTCGTGATTCTTGATGTAAGGCCAGAAGCAGAATTCAAAGAGGGCCATCCACCAGGTGCCATTAATGTGCAAATCTACAGGCTTATAAAGGAGTGGACAGCATGGGACATCGCCAGGAGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAATTCTTGCAAAGTGTAGAATCAAAAATAGATAAAAATGCCAAAATAATAGTAGCATGCTCATCCGGTGGGACAATGAAACCCACCCAGAACCTCCCAGAAGGTCAACAATCAAGGTCACTGATAGCAGCCTACTTGTTGGTTCTCAATGGCTATACCAACGTATTTCACTTAGAAGGGGGTCTCTACAATTGGTTCAAAGAAGGATTGCCTGTAGTTTCAGAAGAGTAA 720 44.03 MAAFASLTLTSSSSSLHPTVQISPLVLSSKFLYDPSSYRPTVGSFRHAKQKFAPQTNPRSLIILGAATKQAKTPAEEDWKVKREVLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIDKNAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYNWFKEGLPVVSEE 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 210396 213505 - MC10g0033 Mch10g0037 677130

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0037 239 Gene3D - 78 235 IPR036873 -
Mch10g0037 239 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 89 236 IPR036873 -
Mch10g0037 239 CDD RHOD 98 228 - -
Mch10g0037 239 Pfam Rhodanese-like domain 96 230 IPR001763 -
Mch10g0037 239 ProSiteProfiles Rhodanese domain profile. 104 237 IPR001763 -
Mch10g0037 239 FunFam Rhodanese-like domain-containing protein 14, chloroplastic 78 236 - -
Mch10g0037 239 SMART rhod_4 94 234 IPR001763 -
Mch10g0037 239 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 10 238 IPR043186 GO:0009507(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0037 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g997 . Blo15g00078 . . . Bpe07g01026 . . Cmo16g00036 . . . . . Sed07g0876 . Cpe14g00024 Bhi01g01519 Tan01g0061 Cmetu06g0246 . Hepe07g0039 Mch10g0037 . . . . . . . . . . . Cone15ag0001 . . . Cme06g01169 . . Bda06g00795 . . . . Bma12g01221 . . . Cma16g00031 . Car16g00029 . . . . . . . . . . Cla05g00987 Cam05g1078 Cec05g1086 Cco05g1080 Clacu05g1072 Cmu05g1022 Cre05g1096 . Csa03g01965 . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Mch10g0522 . 91 413 Sulfurtransferasese/Rhodanese AT1G79230 74.9 2.9e-148 521.5
Mch10g0522 . 91 355 Sulfurtransferasese/Rhodanese AT1G16460 73.2 1.7e-114 409.1
Mch3g1662 . 33 309 Sulfurtransferasese/Rhodanese AT5G23060 60.1 1.2e-82 303.5
Mch5g0466 . 1 443 Sulfurtransferasese/Rhodanese AT4G01050 55.2 3.3e-114 409.1
Mch6g2767 . 65 669 Sulfurtransferasese/Rhodanese AT1G09280 64.7 8.6e-228 786.6
Mch9g1373 . 135 484 Sulfurtransferasese/Rhodanese AT2G40760 77.4 5.9e-158 554.3
Mch8g2444 . 78 422 Sulfurtransferasese/Rhodanese AT1G17850 66.9 5.7e-147 517.7
Mch1g0069 . 1 176 Sulfurtransferasese/Rhodanese AT2G42220 78.4 8.6e-78 287.0
Mch6g0106 . 1 304 Sulfurtransferasese/Rhodanese AT4G24750 68.1 2.3e-112 402.1
Mch2g0185 . 67 306 Sulfurtransferasese/Rhodanese AT5G19370 63.1 1.9e-82 302.8
Mch10g0037 . 59 239 Sulfurtransferasese/Rhodanese AT4G27700 79.6 7.5e-79 290.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30