Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0064 ATGGGCTACGGAAGGCTCAACGAGACCGACCCGGGCGGCACCTCCGGGCCCGGACCCGCCCACGATCACCTCCCCACCCCCAATAATCCAAGGAAGCGACGGTTTCTCCTTCTATCTCTCCTCTCCATCCTTCTAATCGTCGCCGCCGCCGTCTCCGCCACCTTCCTCGTCGGAATCCGAACCGCCTCCCACGGCCGCTCCGACCCGAATCTCCCTCTGAAGCCCACTCAGGCCATTTCCAAGGCCTGCAGCCGAACTCGCTACCCGACTCTCTGTGTCAACTCGCTCCTCGATTTCCCCGATTCACTCGACGCCGACGAGCACGATCTGGTCCACATTTCCTTCAACATCACCCTCCAGCGTCTCAACAAGGCCCTCTACTCCTCCTCCGAGATCTCCCCCCTTCAAATGGATCTCCGCGTCCGCTCCGCCTACGACGCCTGCCTCGAACTCCTCGATGACTCCGTCGACGCTCTCTCCCGCTCCCTGCAGTCCATCGCGCCCTCCTCCTCCTCCGACGGCCGCCCTCAGCGCATCGGCTCCTCTCAGGACGTCATTACCTGGCTCAGCGCCGCCCTCACCAACCAAGACACCTGTACCGACGGATTCGCCGAACTCACCGGCGCCGTCAAGGATCAAATGACGGATAAACTCCACAACTTGTCGGAACTCGTCAGCAACTGCTTGGCGCTGTTCTCCGGCAGCGAAACGAGCGATTTCGACGGAGTGCCGATCCAGAACAAGCGGCGGCTGATGGAGGCCGCCGACGAGGAGTCCGGGAACTTCCCCCGGTGGATGAGTCGGAGGGAGAGGAGGTTGCTGACGATGCCGGTATCGGCGCTTCAGGCGGATATTGTGGTGTCTCAGAACGGGAGCGGAACGGCGAAGACGATCGCGGAAGCGATCAAAAAGGCGCCGCAGTACAGCAGCCGGCGGACGATCATTTACGTGATGGCAGGAAGGTACGAAGAGAAGAATCTCAAGGTGGGGAGGAAGAAAACCAACTTGATGTTCGTCGGGGACGGGAAGGCTAAAACGGTCATTTCGGGTGATAAGAGCATCTTCGACAACGTGACGACTTTCCACACCGCGTCGTTTGCTGCTACCGGCGCTGGGTTAATCTTGAGAGACATGACATTTGAGAACTGGGCCGGGCCAGGCCGGCACCAGGCAGTGGCGCTCCGGGTTGGCGCCGACCATGCCGTCGTGTACCGCTGCAACATAATCGGCTATCAGGACACTCTCTACGTCCATTCGAACCGCCAATTCTACCGGGAATGTGACATTTACGGGACCGTCGATTTTATCTTCGGCAATGCGGCGGTGGTGTTCCAAAACTGTAGCATTTACGCCCGAAAGGCCATGGATCTTCAGAAGAACACCATCACGGCCCAAAACCGGAAGGATCCGAATCAGAACACCGGCATCTCCATCCACGCCTGCCGGATTCTGGCCACCTCCGATCTCACGGCGTCCAATAGTAGCAACCCGACATATCTGGGCCGTCCGTGGAAATTATACTCTAGAGTCGTTTACATGCTATCATACATCGGCGGCCACGTGCACCCACACGGTTGGCTAGAGTGGAATGCCACGTTCGCTTTGGACACGCTGTATTACGGTGAGTATATGAATTATGGGCCGGGTGGGGCGGTGGGCCAGCGGGTCACGTGGCCCGGGTATCGGGTCATAACGTCCACGGTGGAAGCGAACAAGTTCACGGTGGCGCAGTTCATTTACGGCTCGTCGTGGCTGCCGTCCACCGGAGTCGCGTTTCTCGGAGGGCTAAATGTGTAA 1797 59.15 MGYGRLNETDPGGTSGPGPAHDHLPTPNNPRKRRFLLLSLLSILLIVAAAVSATFLVGIRTASHGRSDPNLPLKPTQAISKACSRTRYPTLCVNSLLDFPDSLDADEHDLVHISFNITLQRLNKALYSSSEISPLQMDLRVRSAYDACLELLDDSVDALSRSLQSIAPSSSSDGRPQRIGSSQDVITWLSAALTNQDTCTDGFAELTGAVKDQMTDKLHNLSELVSNCLALFSGSETSDFDGVPIQNKRRLMEAADEESGNFPRWMSRRERRLLTMPVSALQADIVVSQNGSGTAKTIAEAIKKAPQYSSRRTIIYVMAGRYEEKNLKVGRKKTNLMFVGDGKAKTVISGDKSIFDNVTTFHTASFAATGAGLILRDMTFENWAGPGRHQAVALRVGADHAVVYRCNIIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSIYARKAMDLQKNTITAQNRKDPNQNTGISIHACRILATSDLTASNSSNPTYLGRPWKLYSRVVYMLSYIGGHVHPHGWLEWNATFALDTLYYGEYMNYGPGGAVGQRVTWPGYRVITSTVEANKFTVAQFIYGSSWLPSTGVAFLGGLNV 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 342442 345721 - MC10g0059 Mch10g0064 677157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0064 598 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 234 IPR035513 -
Mch10g0064 598 NCBIfam pectinesterase inhibitor domain 53 232 IPR006501 GO:0004857(InterPro)
Mch10g0064 598 SMART PMEI_2 74 231 IPR006501 GO:0004857(InterPro)
Mch10g0064 598 FunFam Pectinesterase 278 596 - -
Mch10g0064 598 Pfam Pectinesterase 284 581 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch10g0064 598 ProSitePatterns Pectinesterase signature 2. 429 438 IPR033131 -
Mch10g0064 598 Gene3D - 278 596 IPR012334 -
Mch10g0064 598 PANTHER PECTINESTERASE 37 587 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Mch10g0064 598 CDD PMEI-like_3 82 233 - -
Mch10g0064 598 MobiDBLite consensus disorder prediction 1 27 - -
Mch10g0064 598 Pfam Plant invertase/pectin methylesterase inhibitor 78 231 IPR006501 GO:0004857(InterPro)
Mch10g0064 598 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 233 IPR035513 -
Mch10g0064 598 FunFam Pectinesterase 75 235 - -
Mch10g0064 598 SUPERFAMILY Pectin lyase-like 279 594 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0064 Mch-Chr10:342442 Mch9g0697 Mch-Chr9:5247033 2.74E-156 dispersed
Mch10g0064 Mch-Chr10:342442 Mch6g1850 Mch-Chr6:21011905 1.03E-274 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0064 - - - 0.0