Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0077 ATGCATTCACTGAACAAGCAGCAGCGGCAGCGGGAACTTCCTCCGACCGAGCTCCGGCGGCCGGCCGCCGGAATGTGCGATTTCGCCATGATTAAAACTAAGAATGCTCGTCGGAGGCGGCTCAGAGTTCGTAAACTCAGGTACAATTGGCAAAGGAAGATACACGCCGCCGATGTAGGCGAAAAGGAGCATGGAGCTCCGGAATCGAATGATAATCTAGTCGCTCGGAAGGAATCGATGGCTGTGTCGGCGTCTGATTCTGAAAGTAGCGGTTCCGATTGCGGGCCGTACAGCGAGATGTCGATTATAGGGCGGAGGAAAGAGATGGAAGATGAAGTGAGAGTTGAATTAGGATTGACGGCGGTTAATGATGCGAGGTACGATTTCTTCGCGGTGTACGACGGCCACGGCGGGGCACAGGTGGCGCAGGTGTGCCGTGAGCGGTTGCACCGGATAGTGGCGGAGGAGATTGTAGATCGGGGGGAGATGGATGGGGCGGAGTGGGAGAGATTGATGGAGAGGTGCTTCGAGAGAATGGATGAGGAAGTGAGCAGCGGCGCCGCCGTGATGAAGACGGTGGGGTCGGCGGTGGTGACGGCGGTGATCGGAGAGGAGGAGATGGTGGTGGCGAATTGCGGGGATTGTCGAGCCGTCTTGGCTAGGGACGGTATTGCCTTGCCCTTGTCTAACGATCATAAGCCTGGCAGAGCTGATGAGTTGAGGAGAATTGAATCTGCCGGTGGAAGGGTCATAAACTGGAATGGCTACCGGGTGCTAGGAGTTCTTGCCACTTCGAGATCGATCGGTGATGAATATCTTAAACCGTTTGTCATCTCCAAACCAGAAGTTACAGTGACTAAGCGAACGAACAACGACGAGTTCCTCATACTCGGAAGCGATGGCCTGTGGGATGTTGTATCGAACGAGATTGCCTGCAACGTAGTGAGGAGATGTTTTGGAGGCAAAATGAAGAGGATTTCGTTAAAGGTGGCAAACGACAGCCATGTTGCTGAAGCTGCAGCCGTTTTGGCGGAGCTCGCGGTGGCTCGTGGAAGCAAGGACAACATCAGTGTTATAGTAGTAGATTTGAGGAAACGGAACAGTTCCTCTACTTAA 1116 53.85 MHSLNKQQRQRELPPTELRRPAAGMCDFAMIKTKNARRRRLRVRKLRYNWQRKIHAADVGEKEHGAPESNDNLVARKESMAVSASDSESSGSDCGPYSEMSIIGRRKEMEDEVRVELGLTAVNDARYDFFAVYDGHGGAQVAQVCRERLHRIVAEEIVDRGEMDGAEWERLMERCFERMDEEVSSGAAVMKTVGSAVVTAVIGEEEMVVANCGDCRAVLARDGIALPLSNDHKPGRADELRRIESAGGRVINWNGYRVLGVLATSRSIGDEYLKPFVISKPEVTVTKRTNNDEFLILGSDGLWDVVSNEIACNVVRRCFGGKMKRISLKVANDSHVAEAAAVLAELAVARGSKDNISVIVVDLRKRNSSST 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 433518 440058 + MC10g0070 Mch10g0077 677170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0077 371 ProSiteProfiles PPM-type phosphatase domain profile. 96 363 IPR001932 -
Mch10g0077 371 MobiDBLite consensus disorder prediction 1 21 - -
Mch10g0077 371 SUPERFAMILY PP2C-like 96 364 IPR036457 -
Mch10g0077 371 Gene3D - 92 370 IPR036457 -
Mch10g0077 371 PANTHER PROTEIN PHOSPHATASE 79 362 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch10g0077 371 CDD PP2Cc 97 363 IPR001932 -
Mch10g0077 371 Pfam Protein phosphatase 2C 99 356 IPR001932 -
Mch10g0077 371 SMART PP2C_4 83 361 IPR001932 -
Mch10g0077 371 FunFam Protein phosphatase 2C 50 105 371 - -
Mch10g0077 371 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169(InterPro)
Mch10g0077 371 MobiDBLite consensus disorder prediction 78 98 - -
Mch10g0077 371 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0077 Mch-Chr10:433518 Mch3g0195 Mch-Chr3:2450485 7.30E-79 dispersed
Mch10g0077 Mch-Chr10:433518 Mch10g0083 Mch-Chr10:469414 5.78E-39 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0077 K14497 - csv:101214188 508.834