Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g0077 | ATGCATTCACTGAACAAGCAGCAGCGGCAGCGGGAACTTCCTCCGACCGAGCTCCGGCGGCCGGCCGCCGGAATGTGCGATTTCGCCATGATTAAAACTAAGAATGCTCGTCGGAGGCGGCTCAGAGTTCGTAAACTCAGGTACAATTGGCAAAGGAAGATACACGCCGCCGATGTAGGCGAAAAGGAGCATGGAGCTCCGGAATCGAATGATAATCTAGTCGCTCGGAAGGAATCGATGGCTGTGTCGGCGTCTGATTCTGAAAGTAGCGGTTCCGATTGCGGGCCGTACAGCGAGATGTCGATTATAGGGCGGAGGAAAGAGATGGAAGATGAAGTGAGAGTTGAATTAGGATTGACGGCGGTTAATGATGCGAGGTACGATTTCTTCGCGGTGTACGACGGCCACGGCGGGGCACAGGTGGCGCAGGTGTGCCGTGAGCGGTTGCACCGGATAGTGGCGGAGGAGATTGTAGATCGGGGGGAGATGGATGGGGCGGAGTGGGAGAGATTGATGGAGAGGTGCTTCGAGAGAATGGATGAGGAAGTGAGCAGCGGCGCCGCCGTGATGAAGACGGTGGGGTCGGCGGTGGTGACGGCGGTGATCGGAGAGGAGGAGATGGTGGTGGCGAATTGCGGGGATTGTCGAGCCGTCTTGGCTAGGGACGGTATTGCCTTGCCCTTGTCTAACGATCATAAGCCTGGCAGAGCTGATGAGTTGAGGAGAATTGAATCTGCCGGTGGAAGGGTCATAAACTGGAATGGCTACCGGGTGCTAGGAGTTCTTGCCACTTCGAGATCGATCGGTGATGAATATCTTAAACCGTTTGTCATCTCCAAACCAGAAGTTACAGTGACTAAGCGAACGAACAACGACGAGTTCCTCATACTCGGAAGCGATGGCCTGTGGGATGTTGTATCGAACGAGATTGCCTGCAACGTAGTGAGGAGATGTTTTGGAGGCAAAATGAAGAGGATTTCGTTAAAGGTGGCAAACGACAGCCATGTTGCTGAAGCTGCAGCCGTTTTGGCGGAGCTCGCGGTGGCTCGTGGAAGCAAGGACAACATCAGTGTTATAGTAGTAGATTTGAGGAAACGGAACAGTTCCTCTACTTAA | 1116 | 53.85 | MHSLNKQQRQRELPPTELRRPAAGMCDFAMIKTKNARRRRLRVRKLRYNWQRKIHAADVGEKEHGAPESNDNLVARKESMAVSASDSESSGSDCGPYSEMSIIGRRKEMEDEVRVELGLTAVNDARYDFFAVYDGHGGAQVAQVCRERLHRIVAEEIVDRGEMDGAEWERLMERCFERMDEEVSSGAAVMKTVGSAVVTAVIGEEEMVVANCGDCRAVLARDGIALPLSNDHKPGRADELRRIESAGGRVINWNGYRVLGVLATSRSIGDEYLKPFVISKPEVTVTKRTNNDEFLILGSDGLWDVVSNEIACNVVRRCFGGKMKRISLKVANDSHVAEAAAVLAELAVARGSKDNISVIVVDLRKRNSSST | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 433518 | 440058 | + | MC10g0070 | Mch10g0077 | 677170 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g0077 | 371 | ProSiteProfiles | PPM-type phosphatase domain profile. | 96 | 363 | IPR001932 | - | |
Mch10g0077 | 371 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Mch10g0077 | 371 | SUPERFAMILY | PP2C-like | 96 | 364 | IPR036457 | - | |
Mch10g0077 | 371 | Gene3D | - | 92 | 370 | IPR036457 | - | |
Mch10g0077 | 371 | PANTHER | PROTEIN PHOSPHATASE | 79 | 362 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Mch10g0077 | 371 | CDD | PP2Cc | 97 | 363 | IPR001932 | - | |
Mch10g0077 | 371 | Pfam | Protein phosphatase 2C | 99 | 356 | IPR001932 | - | |
Mch10g0077 | 371 | SMART | PP2C_4 | 83 | 361 | IPR001932 | - | |
Mch10g0077 | 371 | FunFam | Protein phosphatase 2C 50 | 105 | 371 | - | - | |
Mch10g0077 | 371 | ProSitePatterns | PPM-type phosphatase domain signature. | 129 | 137 | IPR000222 | GO:0043169(InterPro) | |
Mch10g0077 | 371 | MobiDBLite | consensus disorder prediction | 78 | 98 | - | - | |
Mch10g0077 | 371 | MobiDBLite | consensus disorder prediction | 82 | 96 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0077 | Mch-Chr10:433518 | Mch3g0195 | Mch-Chr3:2450485 | 7.30E-79 | dispersed | |
Mch10g0077 | Mch-Chr10:433518 | Mch10g0083 | Mch-Chr10:469414 | 5.78E-39 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g0077 | K14497 | - | csv:101214188 | 508.834 |