Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g0083 | ATGGTATGCAGCTACAATATAAGGAATGTGATTGCTCAGGCTGGACATATAGGAATAATCAACAGACGGGTCCAAATCAAATATTTGTGGAGGAGCTTACCTGCCAATCTTGGATTTGCTCACACCTGGAAGCGTGAATTTAGAACAAGTCTCATGATGATGGTCGATACGGGTGCATCGGAAAATCGCGGGCTGATTGTTGATCAGCATCCAGAGAAAGATGAAGATGGTGGCTATGCCAGTGGAGGGTGGAAAAGCGATGATGGGAAACTTAGTTGGGGGTATTCAAGTTTCAGAGGAAAGAGGGCAACCATGGAAGATTTCTTTGATATTAAAATGTCAAAGGTCGATGGTCAAACAGTCTGCCTTTTTGGCATTTTTGATGGTCACGGTGGATCCCGTGCTGCAGAGTTTCTGAAGGACCATCTCTTTGAGAATCTCATGAAGCATCCAAAATTTTTGATGGATACCAAATTAGCAATCAGTGAAACTTATCAACAGACCGATGCTGAATTTTTGAATTCAGAAAAAGATACTTTAAGGGACGATGGCTCTACTGCTTCAACAGCTTTGCTAGTTGGTAATCACCTCTATGTTGCAAATGTTGGAGATTCACGTGCTATAATATCAAAGGGTGGTGAAGCTATCCCCCTTTCTGAGGACCATAAGCCGAACAGAACTGACGAGCGAAGGAGAATTGAAAACGCCGGGGGTGTTGTCATGTGGGCTGGTACTTGGAGGGTAGGAGGAGTTTTAGCAATGTCCCGTGCTTTTGGTAACAAGATGTTGAAGCAGTTTGTCGTGGCAGATCCCGAGATTCAGGATCTCGAAGTTGACAAAGACATTGAGTTGCTCGTTCTCGCAAGCGATGGACTTTGGGACGTGGTACGCAACGAGGATGCAGTATTAGTTGCTGGGAAGGAGGAAGAACCCGAGGCAGCTGCTCGGAAGCTAACCGAAGCAGCATTTACCCGTGGTAGCGCTGACAACATAACGTGCATTGTGGTGAAGTTCCATCACGGCAATGCAGGTCCCGCTGCCGATACTCGAGATGCGGACTAA | 1062 | 46.05 | MVCSYNIRNVIAQAGHIGIINRRVQIKYLWRSLPANLGFAHTWKREFRTSLMMMVDTGASENRGLIVDQHPEKDEDGGYASGGWKSDDGKLSWGYSSFRGKRATMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLMDTKLAISETYQQTDAEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRAIISKGGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPEIQDLEVDKDIELLVLASDGLWDVVRNEDAVLVAGKEEEPEAAARKLTEAAFTRGSADNITCIVVKFHHGNAGPAADTRDAD | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 469414 | 473674 | + | MC10g0074 | Mch10g0083 | 677176 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g0083 | 353 | SMART | PP2C_4 | 82 | 336 | IPR001932 | - | |
Mch10g0083 | 353 | FunFam | Probable protein phosphatase 2C 76 | 84 | 344 | - | - | |
Mch10g0083 | 353 | SUPERFAMILY | PP2C-like | 90 | 339 | IPR036457 | - | |
Mch10g0083 | 353 | PANTHER | PROTEIN PHOSPHATASE | 76 | 337 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Mch10g0083 | 353 | CDD | PP2Cc | 94 | 338 | IPR001932 | - | |
Mch10g0083 | 353 | Pfam | Protein phosphatase 2C | 96 | 331 | IPR001932 | - | |
Mch10g0083 | 353 | SMART | PP2C_SIG_2 | 90 | 338 | IPR001932 | - | |
Mch10g0083 | 353 | Gene3D | - | 84 | 342 | IPR036457 | - | |
Mch10g0083 | 353 | ProSitePatterns | PPM-type phosphatase domain signature. | 123 | 131 | IPR000222 | GO:0043169(InterPro) | |
Mch10g0083 | 353 | ProSiteProfiles | PPM-type phosphatase domain profile. | 92 | 338 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0083 | Mch-Chr10:469414 | Mch11g0475 | Mch-Chr11:3037149 | 6.24E-119 | dispersed | |
Mch10g0077 | Mch-Chr10:433518 | Mch10g0083 | Mch-Chr10:469414 | 5.78E-39 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g0083 | K17506 | - | csv:101203681 | 673.7 |