Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0132 AAGATCCCCTTCACCGAAATTCAGTCTGCAACGAATGATTTCGACAAGAGTTTGATAGTTGGTTCTGGTGGATTTGGTATGGTTTACAAAGGAGTTCTTAGGGACAATATAAAGGTTGCTGTGAAGAGAGGCGTGCCGGGATCAAGGCAGGGCCTTCCAGAGTTCCACACTGAGATTGCTATATTGTCGAAAATTCGACATCACCATCTTGTTTCACTTGTTGGATACTGCGAAGAACAGTCAGAAATGATACTGGTTTATGAATATATGGACAAAGGTCCCTTGAAAAAGCAATTGTATGGCTCCGGTGTATTGCCTTTGTCGTGGAAGCAACGGCTAGAAATCTGCATTGGTGCAGCCAGAGGTCTTCACTACCTCCACACTGGTTTTGCACAGGGCATCATCCACCGGGATATCAAATCCACCAACATTTTGCTGGATGAAAACTATGTTGCCAAGGTTGCTGATTTCGGTCTTTCAAGATCCGGGCCTCGTCTCGACGAGACACATGTTAGTACTGGAGTAAAAGGCAGCTTCGGCTATCTAGATCCTGAGTATTTTCGAAGGCAACAACTCACTGATAAGTCAGATGTGTATTCATTTGGAGTAGTGCTCTTTGAAGTTCTTTGTGCTAGGCCTGCTGTTGATCCATTGCTTGCTAGGGAGCAAGTAAATCTCGCTGAATGGGCGCTTCATTGGCAAAGGAAAGGCATGCTTGACAAGATCATCGATCCTCATCTGGTCGGGCAAATC 753 45.29 KIPFTEIQSATNDFDKSLIVGSGGFGMVYKGVLRDNIKVAVKRGVPGSRQGLPEFHTEIAILSKIRHHHLVSLVGYCEEQSEMILVYEYMDKGPLKKQLYGSGVLPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPRLDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLAREQVNLAEWALHWQRKGMLDKIIDPHLVGQI 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 776863 777615 - MC10g0113 Mch10g0132 677225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0132 251 ProSitePatterns Protein kinases ATP-binding region signature. 20 42 IPR017441 GO:0005524(InterPro)
Mch10g0132 251 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Mch10g0132 251 FunFam Receptor-like protein kinase FERONIA 90 251 - -
Mch10g0132 251 PANTHER OS07G0166700 PROTEIN 2 251 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Mch10g0132 251 SUPERFAMILY Protein kinase-like (PK-like) 4 225 IPR011009 -
Mch10g0132 251 ProSiteProfiles Protein kinase domain profile. 14 251 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0132 251 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0132 251 Gene3D Transferase(Phosphotransferase) domain 1 90 251 - -
Mch10g0132 251 PIRSF ILK 1 234 - -
Mch10g0132 251 FunFam receptor-like protein kinase FERONIA 1 89 - -
Mch10g0132 251 Pfam Protein tyrosine and serine/threonine kinase 20 210 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0132 251 SMART serkin_6 14 247 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0132 Mch-Chr10:776863 Mch11g1106 Mch-Chr11:7731521 1.34E-133 dispersed
Mch9g1610 Mch-Chr9:18293041 Mch10g0132 Mch-Chr10:776863 4.02E-108 transposed
Mch10g0132 Mch-Chr10:776863 Mch5g0402 Mch-Chr5:2755865 3.86E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76989 PF07714 PK_Tyr_Ser-Thr 5.00E-47 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0132 - - - 0.0