Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g0145 | ATGGGCGGCACTGCCGAGGAGATTGGACAACAGCTGGTATTCGATGTTGAGCATACTATATTTGTTGCGGTGGGCACGAATGTGGACGAGACCAAGACTACGCTAATTTGGGCTGTCCACAACTTCGCGGGGAAGAATTTTTGTCTGCTTCACGTTCATCCACCTCCCCCTGGTGTTGGTCTGATGTCAGCTCAACCTTTGTCATTTGGTGTGGGGATAAAAGATCATTTGCTTAGCGAAGGAAATGAAGGGCCATCGTCCAATACACTAAAAGAGCAGATAGCCAAGGCATTTGAGGAACCTGGAAGGCAGAAGCCTTTTGAACCTCTTAATCAATATGTTGCCATTCTTGCCAAACTGGGGACAAGCAGAATTACATTATTGCAGAACTCTGCAGATACTCAAGAAAAGGAGAATGCATTTGATGGAGTTTTAAGCAGGTTCAGATCTCAAGGTTTGGTGGATCCTAAATGCTCCAATAATGGAATCCTGGGTACTTCAAGGACAATACTATTGTTAAAGAATGAGGGTGTAAAAGAAAGGGGACGACCAGTTATCCAGGGTCCTGGTTTGCAAGAAGCCATGATTAATGTTAAGCCCATAAAAGAATTTGCAGGAGTGAAGGCCTGGGAAGAGGAAGATGCTGCGGGTGCAAAATTCAAGGCTAAATCAATAGAAAGCTCATGTATGGAGGAGGTGAAAGAAGGAAAAGAGATGGAAGAACTTTTAGAGAGAGAAAAATTAGAAGTAGAAAAGATGAACAAAGAGCGTGATGAGCTCTTGAAAGAACTACACGATGTTCAAGAGCAGACATTGTTACTCGGGAGAAAAGCTTCAGAGTACCAGTGTGATGTGAAGAAGTTGGAGGAGAAGCTGTTTGCAGCTGTTGACCTCTTAGTAAGCTTCAAGGAGAAACGGGATAAGTTGCAGATAGAGCACGAAGGTGCAATGAACAAGCTTAGACAACTGAAGAATATGGTTAAAGGTGAACCTCCATATTTTCGCAGTGCAGAAATGCCCACATTCTCATTCATGGAGATAATTGAGGCAACGAGAAATTTTGACCCTTCCTGGAAGATTGGCGAGGGAAGACATGGTAGTGTCTATAAAGGCCTCCTTCGCCACATGGATGTTGCTATAAAAATGTTTCCTTCATATGGTTCTCATTCCCAATCAAAGTTCCAATACGAGGTTGAGGTCTTGAGTAGGGTAAGGCATCCCAACCTGGTTTCAATTATTGGAGCATGTCCAGAATCTAGGTTAATTGTCTATGAGAATTTGAAAAATAGCAGCTTGGAAGACCAACTTGCCTGCAAAGATCACAATCGCCCACTTCCATGGCAAATAAGGATTCGTGTTGCTGCAGATATCTGCTCAGCTCTTATATTTCTCCATTACAGCAAGCCTTGCATTGTCCATGGAGATATAAAGCCAAGCAAAATCCTACTTGATGCCAACTTTATTGCCAAACTTGGAGGCCTGGGCATCTCTCGCTTGATCCCACGAGAAGAAAATGCCTTTAATTCTGCCTTCGCGTATGATATGTCAAAAGAAAATAATCCATATATTGATCCCGAATACCTTCAGACTGGAAGGTTCACTCCAGAATCAGACATCTACTCTTTTGGTGTTACTTTGCTGCGAATTCTAACTGGAAGAGCACCTTCGGGAATTGTAAAAGATGTAAAATGTGCTCTAGAAAATAACAAGATTGGTGCCATCTTGGACTCATCAGCTGGAGACTGGCCACATGATCTAGCAGAACAATTGGCTCTTGTGGCATTAAGATGCTGTGAGAGGGACAAATCGAATAGGCTTGACCTTGTCTCAGAATTATGGAGTGTTTTGGAGCCTATGAGATCCATTGCCTCAACATCCTTTTCGAGTATGAAGAAACATTCTCGAGTACCTGCCCAATTTACGTGTCCCATTTTTCAGGAAATCATGAAAGATCCACTCATTGCTGCAGATGGGTTCACATACGAAGCAGATGCTATAAGAGGATGGTTTGGAAGTGGCCACGACACTTCTCCAATGACAAATCTTAAACTCGAGCACTGTAATCTTGTGCCAAATTATGCTCTTCTAAATGCAATTCAGGAGTGGCAGCATCAACTATGA | 2121 | 42.9 | MGGTAEEIGQQLVFDVEHTIFVAVGTNVDETKTTLIWAVHNFAGKNFCLLHVHPPPPGVGLMSAQPLSFGVGIKDHLLSEGNEGPSSNTLKEQIAKAFEEPGRQKPFEPLNQYVAILAKLGTSRITLLQNSADTQEKENAFDGVLSRFRSQGLVDPKCSNNGILGTSRTILLLKNEGVKERGRPVIQGPGLQEAMINVKPIKEFAGVKAWEEEDAAGAKFKAKSIESSCMEEVKEGKEMEELLEREKLEVEKMNKERDELLKELHDVQEQTLLLGRKASEYQCDVKKLEEKLFAAVDLLVSFKEKRDKLQIEHEGAMNKLRQLKNMVKGEPPYFRSAEMPTFSFMEIIEATRNFDPSWKIGEGRHGSVYKGLLRHMDVAIKMFPSYGSHSQSKFQYEVEVLSRVRHPNLVSIIGACPESRLIVYENLKNSSLEDQLACKDHNRPLPWQIRIRVAADICSALIFLHYSKPCIVHGDIKPSKILLDANFIAKLGGLGISRLIPREENAFNSAFAYDMSKENNPYIDPEYLQTGRFTPESDIYSFGVTLLRILTGRAPSGIVKDVKCALENNKIGAILDSSAGDWPHDLAEQLALVALRCCERDKSNRLDLVSELWSVLEPMRSIASTSFSSMKKHSRVPAQFTCPIFQEIMKDPLIAADGFTYEADAIRGWFGSGHDTSPMTNLKLEHCNLVPNYALLNAIQEWQHQL | 706 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 871994 | 878736 | - | MC10g_new0023 | Mch10g0145 | 677238 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g0145 | 706 | SUPERFAMILY | RING/U-box | 635 | 705 | - | - | |
Mch10g0145 | 706 | ProSiteProfiles | Protein kinase domain profile. | 354 | 620 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g0145 | 706 | SUPERFAMILY | Protein kinase-like (PK-like) | 328 | 608 | IPR011009 | - | |
Mch10g0145 | 706 | CDD | RING-Ubox_WDSUB1-like | 637 | 692 | - | - | |
Mch10g0145 | 706 | Gene3D | Transferase(Phosphotransferase) domain 1 | 427 | 637 | - | - | |
Mch10g0145 | 706 | Coils | Coil | 299 | 326 | - | - | |
Mch10g0145 | 706 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 638 | 706 | IPR013083 | - | |
Mch10g0145 | 706 | Pfam | Protein tyrosine and serine/threonine kinase | 359 | 608 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g0145 | 706 | SMART | Ubox_2 | 639 | 702 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Mch10g0145 | 706 | ProSiteProfiles | U-box domain profile. | 635 | 706 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Mch10g0145 | 706 | Pfam | U-box domain | 636 | 704 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Mch10g0145 | 706 | Coils | Coil | 236 | 270 | - | - | |
Mch10g0145 | 706 | Gene3D | Phosphorylase Kinase; domain 1 | 334 | 426 | - | - | |
Mch10g0145 | 706 | PANTHER | OS02G0152300 PROTEIN | 214 | 700 | IPR051348 | - | |
Mch10g0145 | 706 | ProSitePatterns | Protein kinases ATP-binding region signature. | 360 | 381 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0145 | Mch-Chr10:871994 | Mch2g0903 | Mch-Chr2:6134365 | 2.31E-93 | dispersed | |
Mch10g0145 | Mch-Chr10:871994 | Mch5g0393 | Mch-Chr5:2688821 | 1.45E-156 | wgd | |
Mch10g0145 | Mch-Chr10:871994 | Mch7g0670 | Mch-Chr7:11369338 | 1.51E-100 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76991 | PF07714 | PK_Tyr_Ser-Thr | 3.30E-34 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g0145 | - | - | - | 0.0 |