Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0147 ATGGGAACCTCTGTTCAGGTGACGCCTCTTTGCGGGGTCTACAATGAAAACCCTCTATCATATTTGGTCTCCGTCGACGGCTTCAACTTCCTTATTGACTGTGGTTGGAACGACCACTTCGACCCTGCTCTTCTTCAACCTCTCTCCAGGGTGGCATCGACGATAGATGCAGTTTTGATATCACATCCTGATACACTTCACCTTGGTGCCCTTCCTTATGCCATGAAACAGCTTGGACTTGCTGCTCCAGTTTTTTCCACTGAACCCGTGTATCGATTGGGCCTTCTTACAATGTATGATCAGTATATTGCTAGGAAGCAAGTATCGGAGTTTGATCTATTTACATTGGATGATATCGATTCTGCTTTCCAAGTTGTAACCAGACTAACATACTCCCAGAATCATCATCTTTCAGGCAAAGGAGAGGGAATAGTTATTGCACCTCACGTGGCTGGGCATCTTTTGGGGGGAACCCTATGGAAGATAACTAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGCAAGGAAAGGCATCTGAACGGAACCATTTTAGAGTCATTTGTGCGACCTGCTGTATTGATAACTGATGCTTATAATGCTCTAAATAATCAACCTTACAGACGCCAAAAGGACAAAGAATTCGGAGTTACCATTTTGGTTAACATAGATACTATCCAGAAGACCTTAAGAGCTAATGGAAATGTGTTACTTCCTGTTGATACTGCTGGGCGAGTGTTGGAGCTTATTCAAATTTTGGAATGGTACTGGGAAGAAGAAAGTTTAAATTATCCCATCTACTTTTTAACTTATGTTTCATCAAGCACAATTGATTATATCAAGAGTTTCCTGGAGTGGATGAGTGATACAATAGCAAAGTCTTTTGAACACACACGGAACAATGCTTTTCTTCTCAAGCATGTGACCCTTCTAATCAATAAAAGTGAACTTGATAATGCTCCAGATGGTCCAAAGGTTGTTCTAGCATCAATGGCTAGTTTGGAAGCTGGTTACTCACATGACATTTTTGTTGAGTGGGCAAATGATGCCAAAAATCTCGTGCTTTTTTCTGAGAAAGGCCAGTTTGCCACTTTGGCTCGTATGCTTCAAGCAGATCCACCTCCAAAAGCTGTTAAGGTAACTGTGTCTAAGAGAGTTCCTTTGGCTGGAGACGAGCTACTTGCTTATGAAGAAGAGCAAAACAGGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTCAAGGAGGAACAATCCAAAGCATCTCATGGAACTGATAATGATACTGGTGATCCAATGATCATTGATGCTAGCAGTAATGCATCACCAGATGTAGGTGGTTCACATGTAAGTGCATATCGAGATATATTAATTGATGGCTTCGTTCCTCCTTCAACAAGCGTTGCTCCAATGTTTCCCTTTTATGAAAACACTTCCGAATGGGATGATTTTGGTGAAGTAATAAATCCTGATGATTATGTAATTAAGGATGAAGACATGGACCAAGCAGCGATGCATGCTGGTGGGGACGTGGATGGAAAACTAGATGAAACTGCTGCTAACCTGATCCTGGATATGAAGCCTTCAAAAGTTGTATCTAACGAATTGACAGTCCAAGTGAAATGTTCATTGCATTACATGGATTTTGAAGGTCGTTCAGATGGGAGATCAATTAAATCAATACTCTCCCACGTTGCTCCCTTGAAGCTTGTTTTGGTGCATGGAACTGCTGAGGCCACTGAGCATCTTAAGCAACATTGCCTAAAAAACGTCTGTCCCCATGTCTATGCCCCCCAAATTGAAGAGACGATTGATGTGACTTCTGATCTGTGTGCATATAAGGTACAACTTTCAGAGAAACTGATGAGTAATGTGCTGTTCAAGAAGCTTGGAGATTATGAAATCGCTTGGCTTGATGCTGAAGTAGGGAAGACTGAGAATGGAACGTTGTCTTTACTTCCCCTCTCAAAGGCTGCTTTGCCTCATAAATCTGTTCTTGTTGGTGACTTAAAGATGGCTGACTACAAACAATTTCTTGCCAGCAAGGGAATACAGGTGGAATTTGCTGGGGGTGCTTTGAGATGCGGTGAGTATGTCACAATACGCAAGGTTGCAGATGCAATTGTTCAATCTGCTATTGGAGTAGGAATTTTCATGGCTTCCACTCCTGCCACGTGTTCACCGAGCTCTCTCCAGCTTCGGCTAGCGCTGAATTGCAAGAATTGCGCGAAATTCCCTTCAGTTCTTGTTCGGGCGAGAGTGAGGAAGCTGGATCCTCGGGTCCGCATGACTTGTTATCCTATTGTTTATAATGGCGCGATAATCGAAAGAGCAAATGGGCAGCGCCGTAGTGGAGTTTGTTTTGCTCGATCGGATTCGACAGGCGATGGATTCTCAGGGTGGTCGGAATCGGATTCCGGGGAGGAGGTTTTGGACTTGCGGAGAAAGACGTGGTTTGGAGGGTTGGTGGGAATTGGAATTACTGGATTCATTCTTGTTTCGGGAATCACCTTTGCAGCATGGTCAATAAGCAAGCAGAATAGTTCCAGACAAAAGCCACAAATGGAGGCCTTAAGTACGCAGCAAGAATTATTATTGGACTCTGATACTGGAAATGATAGGCTGGGTGAAAATGAAAAAGAAGATAACAGTGTGAATGCAGATGATAGAACTCTCGCTGGTAAAACAGGTAATCATGAGGAATCTTCTTCATATACAGAAAATGAAGATCTCGACAAAAATACAGTTGGTGATGGTGTTGATGTCGAGAAGTTATCAGGAAATGATGTTGAATCTTCATCCAGCAATAATGATGTCAATAATGTTGCTTCCTTCCAAGAAGATTTCCAATCTGATTCCCCATCAGCTGTTACGTCAGTTGCTGCCGGAAGTTTGAGTTCACTTATGGAGACTGATTCTAGTGTAGCTTCCGGTTCTAAAGATGGAAACGACTGTCATGCTGTTGGTACAGAAGTCTTAAATTCTGAACCTGAAATGAACATATTGAAAGATGGCCCAGATAACTCTTCTAATTCTAATACTAATTCATTAAACCCTAAAACTGATATTCAGGATGAAACACCTGACACTAGTGAAAATTATGATTTCAGCTCTGAGCATAAAATGAACCTAGTACCTGAGAAGTTACCACTCTATGATGATAGTACATCAAACCATAATTCTGGCAACCAGTATGAACCACCTGGGCCTCTTAATGAAATTTCAGATTCTTCGTTGCATGAACTTTCTAGCGTGTCTGGCGACACAGCCAAGGAATCAGGATTTGTTGACAGAGAGACTGTGACTGAATCATCTAAACAAGTTCTGAACCCCACCAAAACTGAAAGGCTCTTATCTGAGGCAACTACATCAACCTTAGAACAGCAAATAGAAAGAGGATTATCTGAAGCAGCATTTGTCTCTGTCACAGCTTATCCATTGGTTGATGTTCAAGAGAAAGATCATGAAACTATCATGAATAGTACTGCTGCCAAACCGGAACTACAAGGGATTTTATTTTCTTCTGCAGGTGTTCCTGCTCCTTTGGCTTCTGCAGCTATAAAAACACTTCCTGGAAAGGTCCTAGTTCCTGCAGTTGTGGATCAGGTTCAGGGGCAGGCATTGTCAGCACTGCAAGTTTTAAAGGTGATAGAGGCTGAGGTTGAACCTAGTGATCTATGTACACGTCGGGAATATGCTCGTTGGCTGGTGTCTGCAAGCAGTGCTCTTTCAAGGAACACAACATCTAAAGTATATCCAGCAATGTATATAGAGAATGTTACTGAGTTGGCATTTGATGATATTACTCCCGAAGATCCTGATTTTGCATCTATTCAAGGTTTGGCAGAAGCTGGACTGATTTCAAGCAAACTTTCGAGACATGACATTCTTTCTTCCTTTGATGAAGACCAGGGTCCTTTTTATTTCTCTCCCGAAAGCCCCCTATCACGTCAAGATCTTGTGAGTTGGAAGATGGCCCTCGAGAAAAGACAGTTGCCAGAGGCAGATAGAAAGATGCTCCACCAAGTTTCTGGATTTATAGATACTGATAAGATCCATCCCGATGCTTGTCCTGCCCTTGTTGCTGATCTCTCTGTAGGAGAGCATGGAATTATAGCTCTAGCATTTGGATATACAAGGCTTTTCCAGCCGGATAAGCCTGTAACAAAAGCACAAGCTGCCATTGCTCTTGCAACTGGGGAGGCTTCTGATATAGTAAGTGAGGAGCTTGCAAGGATTGAAGCAGAATCAATGGCAGAAAATGCAGTTGCTGCACATGGTGCTCTAGTAGCTCAAGTTGAGAAAGATATTAATGCCAGCTTTGAGAAACAACTCTCAATTGAAAGGGAAAAGGTCGATGCCGTGGAGAAAATGGCAGAAGAGGCAAAGCAAGAGCTGGAGAGATTAAGATCAGAAAGAGAGAGAGAAAATCTCGCCTTGATGAAGGAACATGTTGCCATTGAATCGGAAATGGAAGTTTTTTCAAGATTAAGGAATGAGTTGGAGGAGCAGTTGCAAGGCCTGATGAGTAATAAAGTAGAGGTATCTTATGAAAAGGAAAGAATCAATAAACTCAGGAAAGAAGCTGAAATCGAAAACCAGGAGATTGCCCGCCTGCAATATGAGCTTGAGGTCGAGAGAAAGGCGTTGTCCATGGCCAGAGCTTGGGCAGAGGACGAAGCGAAAAGAGCAAGAGAACAAGCCAAAGCACTTGAAGAGGCTAGAGATCGCTGGGAAAGGCGTGGAATCAAAGTTGTCGTTGACAGCGATCTCCGTGAACAGGAATCCGCTGGCGATACTTGGCTCGATTCTAGCAAACAGTTTTCAGTCAAAGAAACTGTCGACAGGGCCGAGAACTTAATGGACAAGCTGAAAGTAATGGCTGCAGAACTAAGAGGGAAATCCAAAGAGATAGTCGACAAGATCATCGAGAAGATAGCTTTACTAATATCAAACTTGAGGCAATGGGTTTCCGACGCTGGAAAACAGGCTGAAGATCTAAAGGAAGTGGCCATTTCAAGGGCAAGTAGATCAACAAGTGAGCTGCAACAGAGCACTGCGGAGTTGAGGTTGGCGCTGAAAGAGGGAGCAAAGCGAGTTGTGGGAGATTGTAGGGAAGGAGTAGAGAAAATTACCCAAAAGTTCAAAACATCGTATGGTGATTGA 5172 42.88 MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGVTILVNIDTIQKTLRANGNVLLPVDTAGRVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFATLARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGTDNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADAIVQSAIGVGIFMASTPATCSPSSLQLRLALNCKNCAKFPSVLVRARVRKLDPRVRMTCYPIVYNGAIIERANGQRRSGVCFARSDSTGDGFSGWSESDSGEEVLDLRRKTWFGGLVGIGITGFILVSGITFAAWSISKQNSSRQKPQMEALSTQQELLLDSDTGNDRLGENEKEDNSVNADDRTLAGKTGNHEESSSYTENEDLDKNTVGDGVDVEKLSGNDVESSSSNNDVNNVASFQEDFQSDSPSAVTSVAAGSLSSLMETDSSVASGSKDGNDCHAVGTEVLNSEPEMNILKDGPDNSSNSNTNSLNPKTDIQDETPDTSENYDFSSEHKMNLVPEKLPLYDDSTSNHNSGNQYEPPGPLNEISDSSLHELSSVSGDTAKESGFVDRETVTESSKQVLNPTKTERLLSEATTSTLEQQIERGLSEAAFVSVTAYPLVDVQEKDHETIMNSTAAKPELQGILFSSAGVPAPLASAAIKTLPGKVLVPAVVDQVQGQALSALQVLKVIEAEVEPSDLCTRREYARWLVSASSALSRNTTSKVYPAMYIENVTELAFDDITPEDPDFASIQGLAEAGLISSKLSRHDILSSFDEDQGPFYFSPESPLSRQDLVSWKMALEKRQLPEADRKMLHQVSGFIDTDKIHPDACPALVADLSVGEHGIIALAFGYTRLFQPDKPVTKAQAAIALATGEASDIVSEELARIEAESMAENAVAAHGALVAQVEKDINASFEKQLSIEREKVDAVEKMAEEAKQELERLRSERERENLALMKEHVAIESEMEVFSRLRNELEEQLQGLMSNKVEVSYEKERINKLRKEAEIENQEIARLQYELEVERKALSMARAWAEDEAKRAREQAKALEEARDRWERRGIKVVVDSDLREQESAGDTWLDSSKQFSVKETVDRAENLMDKLKVMAAELRGKSKEIVDKIIEKIALLISNLRQWVSDAGKQAEDLKEVAISRASRSTSELQQSTAELRLALKEGAKRVVGDCREGVEKITQKFKTSYGD 1723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 882072 897470 - MC10g0124 Mch10g0147 677240

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0147 1723 MobiDBLite consensus disorder prediction 974 1038 - -
Mch10g0147 1723 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 721 1719 - -
Mch10g0147 1723 MobiDBLite consensus disorder prediction 1006 1026 - -
Mch10g0147 1723 Pfam Beta-Casp domain 249 372 IPR022712 -
Mch10g0147 1723 MobiDBLite consensus disorder prediction 1055 1092 - -
Mch10g0147 1723 Coils Coil 1447 1551 - -
Mch10g0147 1723 MobiDBLite consensus disorder prediction 1052 1110 - -
Mch10g0147 1723 Gene3D - 7 264 IPR036866 -
Mch10g0147 1723 Coils Coil 1612 1639 - -
Mch10g0147 1723 SMART Beta_Casp_2 249 372 IPR022712 -
Mch10g0147 1723 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 540 591 IPR011108 -
Mch10g0147 1723 FunFam Cleavage and polyadenylation specificity factor subunit 2 6 262 - -
Mch10g0147 1723 Pfam Metallo-beta-lactamase superfamily domain 22 197 IPR001279 -
Mch10g0147 1723 Coils Coil 399 419 - -
Mch10g0147 1723 CDD CPSF2-like_MBL-fold 8 203 IPR035639 -
Mch10g0147 1723 MobiDBLite consensus disorder prediction 872 921 - -
Mch10g0147 1723 SUPERFAMILY Metallo-hydrolase/oxidoreductase 5 608 IPR036866 -
Mch10g0147 1723 Coils Coil 1556 1583 - -
Mch10g0147 1723 MobiDBLite consensus disorder prediction 870 942 - -
Mch10g0147 1723 Pfam Cleavage and polyadenylation factor 2 C-terminal 650 708 IPR025069 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0147 K14402 - - csv:101215673 1343.18
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0147 Mch-Chr10:882072 Mch9g1998 Mch-Chr9:21294810 1.64E-45 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g707 . . . . . . . Bma14g02074 . Cmo18g01276 . . . . . . Cpe14g00103 Bhi01g01302 Tan01g0237 . . . Mch10g0147 . . . . . . . . Cone1ag1163 Cone5ag0873 . . . . . Cme06g01012 . . . . . . . . . . . . . Car16g00107 Car18g01161 Cpe09g00084 . . . . . . . . Cla05g00890 . Cec05g0981 . . Cmu05g0921 . . Csa03g01723 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011726 2 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 0 1 1 1 1 1 30