Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g0170 | TCCGAAATTCTCCCATGGAACTCATTGGTTCCTCATTGCTCTTGGGCTGGCGTTTCTTGCCGACTCGGTCGAGTTACAGAGCTCTCTCTTTCGTCTCGTTCGCTCAAAGGCCAACTCTCTCCTTCTCTCTTCAACATTTTGAGCCTCATGGTTCTTGACCTTTCCTCCAACTCCCTCCACGGCTCAATCCCACCTCAGATATCCAATCTCCGGAGCTTGAAGGTGCTCGCTCTCGGCGGAAACCAGTTTTCTGGCGACTTCCCTGTCGAACTCACTGAGTTGACCCAGTTGGAGAATCTCAAGCTGGGGACTAATTTATTCACAGGTGAAATCCCGCCGGAGCTTGGTAATTTGAAGCTGCTACAGACGCTCGACCTCTCCGGCAATGCCTTCGTCGGGAATGTTCCGGCCCACATCGGAAACTTGACGAGGATTTTATCCTTGGACCTCGGCAACAATCTCTTATCAGGTTCACTCCCATTGACCATCTTTACTGAGCTTAAATCTCTAACTTCTTTGGACATTTCGAACAACTCGTTTTCTGGTTCAATCCCACCTGAAATTGGTAACCTACAGCATTTAACCGACCTTTATATCGGCATTAACCACTTTTCTGGTGAGTTGCCTCCTGAAGTTGGGAAACTTGCATTGCTCGAGAACTTTTTCTCGCCTTCTTGTTCTCTCACGGGTCCATTGCCTGAAGAACTATCCAAGTTGAAATCATTGAGCAAACTTGACCTTTCATACAACCCACTTGGCTGCTCTATCCCAAAATCAATCGGCGAGTTGCAGAACCTGACTATACTGAATCTGGTTTACACAGAACTTAATGGTTCCATTCCTGCGCAACTTGGAAGGTGCAGAAATTTGAAAACATTGATGGTTTCGTTCAACTTTCTATCTGGGGTGTTGCCACAAGAGCTTTCAGAACTTCCCATGTTGACATTTTCTGCCGAGAAGAATCAGCTTTCTGGGCCACTACCCTCCTGGCTCGGCAAATGGAATCATGTCGATTCTATTTTGCTCTCAAGCAATCGGTTCACTGGGAAAATCCCACCTGAGATTGGAAACTGTTCAATGCTTAAGCACCTTAGTTTGAGTAATAACTTGTTGGCAGGTCCGATACCTAAAGAAATCTGTAATGCTGCATCCTTGATGGAGATTGATCTTGACAGTAACTTCCTTTCAGGTACGATTGACGACACATTTGTGCAGTGTAGAAACCTTACAGAGTTGGTTTTGGTAGACAATCAGATTGTTGGTACAATACCAGAGTACTTCTCAGACCTTCCCCTACTGGTAATCGACCTCGACTCTAATAATTTTACTGGTTCTTTACCGAGAAGTATATGGAACTCAGTAGATTTGATGGAATTCTCTGCTGCAAATAACCGGTTGGAGGGTCATCTCCCTTCAGAAATCGGTTATGCAGCTTCACTTGAGAGGCTTGTTCTCAGCAACAATAGGTTGACAGGTACAATACCAGATGAGATTGGAAATCTCACAGACCTTTCTGTTCTAAATTTGAATTCAAATCTGCTTGAAGGTACTATTCCATCCTTGCTTGGAGATTGCAGTAAACTTACCACATTGGACCTTGGGAACAATAGTTTGGACGGGTCCATCCCGGAAAGACTTGCAGACCTTACTGAATTACAGTGCCTAGTTCTTTCACACAACAAGTTATCTGGAGCAATACCTTTCAAGCCGTCTGCGTATTTTCGACAGATGACTATTCCTGATTTGAGCTTTGTCCAGCATCATGGTGTTTTTGATCTGTCTCACAATAGATTGTCTGGTACCATACCAGATGAACTGGGGAAATGTGTGGTAGTGGTTGATCTTTTACTAAGCAATAATCTGCTTTCTGGAGAAATTCCCAGATCTCTCTCTCACTTAACAAACCTGACAACCTTGGATCTGTCTGGTAATATGCTTACTGGTCCTATTCCCACAGAGATCGGGGATGCTCTCAAGCTCCAAGGCCTATATCTTGGGAATAATCAGCTCACTAGAACGATCCCCGAAAGCCTGAGTCATTTGAATAGCTTGGTAAAGTTGAACCTAACTGGTAACAAGTTATCTGGTTCGGTTCCAAAAAGTCTTGGTGATCTGAAAGCATTAACTCATTTGGATTTAAGTTCCAATGAGCTGGATGGTGATCTTCCTTCTTCTCTGTCCAGCATGTTGAATCTTGTGGGGCTTTATGTACAAGAGAACAGGCTTTCTGGTCTGGTTGTTGAACTTTTCCCAAGTTCCATGACATGGAAGATTGAAACTTTGAATTTGAGTAGTAACTATTTCGAGGGTGTACTTCCACGAACATTGGGCAATCTTTCATACTTGACAACTTTGGATCTTCATGGGAATAAGTTTACAGGGCCGATCCCTTCTGAACTTGGGGATCTTATGCAACTCGAGTACTTTGATGTTTCGAAAAACAGGCTCTCAGGAGAGATTCCAGAGAAGATATGCAGCGTGGCCAATATGTTTTACCTGAATTTGGCTGAAAACAGTCTAGAAGGCCCGATTCCAAGAAGTGGCATTTGCCAGAATCTGTCCAAGACTTCACTTGCAGGTAACAAGGACCTTTGTGGGAGAATCATGGGTTTCAATTGCCAGATCAAAAGCTTGGAGAGATCTGCAGTCTTGAATGCTTGGAGCCTTGCTGGAATTATCGTCGTAAGTGTTCTTATTGTTCTTACCGTGGCATTCGCTATGCGGAGACAGATTATTAGAAACCACAGAGATAATGATCCAGAGGAAATGGAGGAAAGCAAACTAAACAGTTTTATAGATCCAAATCTCTATTTCTTAAGCAGCAGCAGATCGAAAGAGCCTTTAAGCATCAACGTGGCCATGTTCGAGCAGCCCCTTTTGAAATTAACCTTGGTTGATATCCTCGTAGCAACCAATAACTTCTGTAAAACGAACATTATTGGAGATGGAGGATTTGGGACCGTGTACAAGGCCACTTTGCCTGATGGAAAAATTGTTGCTGTGAAGAAGCTTAGCGAAGCAAAAACGCAGGGGCACAGAGAATTTATTGCTGAAATGGAAACTCTAGGTAAAGTAAAACATCATAATCTTGTTTCACTGCTTGGCTACTGCTCTCTTGGGGAGGAGAAGCTCCTTGTCTACGAGTATATGGTGAATGGCAGCTTGGATCTTTGGCTGAGAAACCGAATCGGAACTCTTGAAGTCCTTAACTGGGAGACTCGCTTCAAAGTCGCTTCCGGTGCAGCCCGTGGATTGGCATTTCTTCACCATGGATTCATCCCCCACATCATTCACAGAGATATCAAAGCAAGCAATATACTCCTCAACGAAGACTTCGAGCCAAAAGTTGCTGACTTCGGGTTGGCGAGACTGATCAGTGCTTGTGAGACTCATGTCACAACTGAGATTGCTGGAACCTTTGGCTACATCCCACCGGAGTACGGGCAGAGCGGGAGGTCTACCGCGAAAGGAGACGTTTATAGCTTTGGTGTGATTCTACTGGAACTGGTAACTGGGAAGGAACCAACAGGACCTGACTTCAAAGAGATTGAGGGTGGAAATCTGGTTGGTTGGGTGTTTCAGAAGATCAAGAAGGGTCAGGCTGCGGACGTCCTCGACACGACAGTTCTGAATGCTGATTCGAAGCATATGATGCTTCAAACTCTTCAGATTGCTTGTATTTGCCTGTCAGAAAATCCTGCTAACAGACCTTCCATGCTTCAGGTACTGAAGTTCCTCAAAGGGATAAAGGATGAG | 3756 | 44.46 | SEILPWNSLVPHCSWAGVSCRLGRVTELSLSSRSLKGQLSPSLFNILSLMVLDLSSNSLHGSIPPQISNLRSLKVLALGGNQFSGDFPVELTELTQLENLKLGTNLFTGEIPPELGNLKLLQTLDLSGNAFVGNVPAHIGNLTRILSLDLGNNLLSGSLPLTIFTELKSLTSLDISNNSFSGSIPPEIGNLQHLTDLYIGINHFSGELPPEVGKLALLENFFSPSCSLTGPLPEELSKLKSLSKLDLSYNPLGCSIPKSIGELQNLTILNLVYTELNGSIPAQLGRCRNLKTLMVSFNFLSGVLPQELSELPMLTFSAEKNQLSGPLPSWLGKWNHVDSILLSSNRFTGKIPPEIGNCSMLKHLSLSNNLLAGPIPKEICNAASLMEIDLDSNFLSGTIDDTFVQCRNLTELVLVDNQIVGTIPEYFSDLPLLVIDLDSNNFTGSLPRSIWNSVDLMEFSAANNRLEGHLPSEIGYAASLERLVLSNNRLTGTIPDEIGNLTDLSVLNLNSNLLEGTIPSLLGDCSKLTTLDLGNNSLDGSIPERLADLTELQCLVLSHNKLSGAIPFKPSAYFRQMTIPDLSFVQHHGVFDLSHNRLSGTIPDELGKCVVVVDLLLSNNLLSGEIPRSLSHLTNLTTLDLSGNMLTGPIPTEIGDALKLQGLYLGNNQLTRTIPESLSHLNSLVKLNLTGNKLSGSVPKSLGDLKALTHLDLSSNELDGDLPSSLSSMLNLVGLYVQENRLSGLVVELFPSSMTWKIETLNLSSNYFEGVLPRTLGNLSYLTTLDLHGNKFTGPIPSELGDLMQLEYFDVSKNRLSGEIPEKICSVANMFYLNLAENSLEGPIPRSGICQNLSKTSLAGNKDLCGRIMGFNCQIKSLERSAVLNAWSLAGIIVVSVLIVLTVAFAMRRQIIRNHRDNDPEEMEESKLNSFIDPNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILVATNNFCKTNIIGDGGFGTVYKATLPDGKIVAVKKLSEAKTQGHREFIAEMETLGKVKHHNLVSLLGYCSLGEEKLLVYEYMVNGSLDLWLRNRIGTLEVLNWETRFKVASGAARGLAFLHHGFIPHIIHRDIKASNILLNEDFEPKVADFGLARLISACETHVTTEIAGTFGYIPPEYGQSGRSTAKGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVFQKIKKGQAADVLDTTVLNADSKHMMLQTLQIACICLSENPANRPSMLQVLKFLKGIKDE | 1252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1013841 | 1017596 | - | MC10g0141 | Mch10g0170 | 677263 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g0170 | 1252 | Gene3D | Ribonuclease Inhibitor | 3 | 92 | IPR032675 | - | |
Mch10g0170 | 1252 | SUPERFAMILY | Protein kinase-like (PK-like) | 955 | 1246 | IPR011009 | - | |
Mch10g0170 | 1252 | ProSiteProfiles | Protein kinase domain profile. | 974 | 1252 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g0170 | 1252 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1050 | 1251 | - | - | |
Mch10g0170 | 1252 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 936 | 1049 | - | - | |
Mch10g0170 | 1252 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 581 | 877 | - | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 501 | 525 | IPR003591 | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 633 | 657 | IPR003591 | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 705 | 728 | IPR003591 | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 729 | 752 | IPR003591 | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 167 | 191 | IPR003591 | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 142 | 166 | IPR003591 | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 779 | 803 | IPR003591 | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 681 | 704 | IPR003591 | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 46 | 70 | IPR003591 | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 549 | 570 | IPR003591 | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 239 | 263 | IPR003591 | - | |
Mch10g0170 | 1252 | SMART | LRR_typ_2 | 94 | 118 | IPR003591 | - | |
Mch10g0170 | 1252 | Gene3D | Phosphorylase Kinase; domain 1 | 937 | 1049 | - | - | |
Mch10g0170 | 1252 | PRINTS | Leucine-rich repeat signature | 170 | 183 | - | - | |
Mch10g0170 | 1252 | PRINTS | Leucine-rich repeat signature | 633 | 646 | - | - | |
Mch10g0170 | 1252 | SUPERFAMILY | L domain-like | 578 | 866 | - | - | |
Mch10g0170 | 1252 | Pfam | Leucine rich repeat | 504 | 562 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine rich repeat | 384 | 442 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine rich repeat | 758 | 816 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Gene3D | Ribonuclease Inhibitor | 165 | 314 | IPR032675 | - | |
Mch10g0170 | 1252 | Gene3D | Ribonuclease Inhibitor | 576 | 875 | IPR032675 | - | |
Mch10g0170 | 1252 | Gene3D | Ribonuclease Inhibitor | 315 | 575 | IPR032675 | - | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 635 | 655 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 339 | 358 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 361 | 381 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 708 | 729 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 169 | 191 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 659 | 681 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 48 | 70 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 479 | 501 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 121 | 142 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 683 | 705 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 241 | 263 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Leucine Rich Repeat | 591 | 609 | IPR001611 | GO:0005515(InterPro) | |
Mch10g0170 | 1252 | Pfam | Protein tyrosine and serine/threonine kinase | 978 | 1245 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g0170 | 1252 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 10 | 162 | - | - | |
Mch10g0170 | 1252 | ProSitePatterns | Protein kinases ATP-binding region signature. | 980 | 1003 | IPR017441 | GO:0005524(InterPro) | |
Mch10g0170 | 1252 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 1050 | 1252 | - | - | |
Mch10g0170 | 1252 | FunFam | Uncharacterized protein | 315 | 579 | - | - | |
Mch10g0170 | 1252 | SMART | serkin_6 | 974 | 1246 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g0170 | 1252 | SMART | LRR_sd22_2 | 633 | 648 | - | - | |
Mch10g0170 | 1252 | SMART | LRR_sd22_2 | 167 | 193 | - | - | |
Mch10g0170 | 1252 | SMART | LRR_sd22_2 | 657 | 680 | - | - | |
Mch10g0170 | 1252 | SMART | LRR_sd22_2 | 705 | 734 | - | - | |
Mch10g0170 | 1252 | SMART | LRR_sd22_2 | 239 | 265 | - | - | |
Mch10g0170 | 1252 | SMART | LRR_sd22_2 | 525 | 551 | - | - | |
Mch10g0170 | 1252 | SMART | LRR_sd22_2 | 803 | 829 | - | - | |
Mch10g0170 | 1252 | SMART | LRR_sd22_2 | 46 | 72 | - | - | |
Mch10g0170 | 1252 | SMART | LRR_sd22_2 | 406 | 432 | - | - | |
Mch10g0170 | 1252 | FunFam | leucine-rich repeat receptor protein kinase EMS1 | 165 | 314 | - | - | |
Mch10g0170 | 1252 | SUPERFAMILY | L domain-like | 13 | 315 | - | - | |
Mch10g0170 | 1252 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 633 | 1250 | IPR051564 | GO:0016020(PANTHER) | |
Mch10g0170 | 1252 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1096 | 1108 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g0170 | 1252 | Gene3D | Ribonuclease Inhibitor | 93 | 164 | IPR032675 | - | |
Mch10g0170 | 1252 | SUPERFAMILY | L domain-like | 320 | 583 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0170 | Mch-Chr10:1013841 | Mch4g1482 | Mch-Chr4:18330583 | 7.14E-97 | dispersed | |
Mch9g1482 | Mch-Chr9:17229565 | Mch10g0170 | Mch-Chr10:1013841 | 5.29E-45 | dispersed | |
Mch10g0170 | Mch-Chr10:1013841 | Mch10g1082 | Mch-Chr10:7953754 | 6.89E-83 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76992 | PF07714 | PK_Tyr_Ser-Thr | 2.60E-46 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g0170 | - | - | - | 0.0 |