Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0170 TCCGAAATTCTCCCATGGAACTCATTGGTTCCTCATTGCTCTTGGGCTGGCGTTTCTTGCCGACTCGGTCGAGTTACAGAGCTCTCTCTTTCGTCTCGTTCGCTCAAAGGCCAACTCTCTCCTTCTCTCTTCAACATTTTGAGCCTCATGGTTCTTGACCTTTCCTCCAACTCCCTCCACGGCTCAATCCCACCTCAGATATCCAATCTCCGGAGCTTGAAGGTGCTCGCTCTCGGCGGAAACCAGTTTTCTGGCGACTTCCCTGTCGAACTCACTGAGTTGACCCAGTTGGAGAATCTCAAGCTGGGGACTAATTTATTCACAGGTGAAATCCCGCCGGAGCTTGGTAATTTGAAGCTGCTACAGACGCTCGACCTCTCCGGCAATGCCTTCGTCGGGAATGTTCCGGCCCACATCGGAAACTTGACGAGGATTTTATCCTTGGACCTCGGCAACAATCTCTTATCAGGTTCACTCCCATTGACCATCTTTACTGAGCTTAAATCTCTAACTTCTTTGGACATTTCGAACAACTCGTTTTCTGGTTCAATCCCACCTGAAATTGGTAACCTACAGCATTTAACCGACCTTTATATCGGCATTAACCACTTTTCTGGTGAGTTGCCTCCTGAAGTTGGGAAACTTGCATTGCTCGAGAACTTTTTCTCGCCTTCTTGTTCTCTCACGGGTCCATTGCCTGAAGAACTATCCAAGTTGAAATCATTGAGCAAACTTGACCTTTCATACAACCCACTTGGCTGCTCTATCCCAAAATCAATCGGCGAGTTGCAGAACCTGACTATACTGAATCTGGTTTACACAGAACTTAATGGTTCCATTCCTGCGCAACTTGGAAGGTGCAGAAATTTGAAAACATTGATGGTTTCGTTCAACTTTCTATCTGGGGTGTTGCCACAAGAGCTTTCAGAACTTCCCATGTTGACATTTTCTGCCGAGAAGAATCAGCTTTCTGGGCCACTACCCTCCTGGCTCGGCAAATGGAATCATGTCGATTCTATTTTGCTCTCAAGCAATCGGTTCACTGGGAAAATCCCACCTGAGATTGGAAACTGTTCAATGCTTAAGCACCTTAGTTTGAGTAATAACTTGTTGGCAGGTCCGATACCTAAAGAAATCTGTAATGCTGCATCCTTGATGGAGATTGATCTTGACAGTAACTTCCTTTCAGGTACGATTGACGACACATTTGTGCAGTGTAGAAACCTTACAGAGTTGGTTTTGGTAGACAATCAGATTGTTGGTACAATACCAGAGTACTTCTCAGACCTTCCCCTACTGGTAATCGACCTCGACTCTAATAATTTTACTGGTTCTTTACCGAGAAGTATATGGAACTCAGTAGATTTGATGGAATTCTCTGCTGCAAATAACCGGTTGGAGGGTCATCTCCCTTCAGAAATCGGTTATGCAGCTTCACTTGAGAGGCTTGTTCTCAGCAACAATAGGTTGACAGGTACAATACCAGATGAGATTGGAAATCTCACAGACCTTTCTGTTCTAAATTTGAATTCAAATCTGCTTGAAGGTACTATTCCATCCTTGCTTGGAGATTGCAGTAAACTTACCACATTGGACCTTGGGAACAATAGTTTGGACGGGTCCATCCCGGAAAGACTTGCAGACCTTACTGAATTACAGTGCCTAGTTCTTTCACACAACAAGTTATCTGGAGCAATACCTTTCAAGCCGTCTGCGTATTTTCGACAGATGACTATTCCTGATTTGAGCTTTGTCCAGCATCATGGTGTTTTTGATCTGTCTCACAATAGATTGTCTGGTACCATACCAGATGAACTGGGGAAATGTGTGGTAGTGGTTGATCTTTTACTAAGCAATAATCTGCTTTCTGGAGAAATTCCCAGATCTCTCTCTCACTTAACAAACCTGACAACCTTGGATCTGTCTGGTAATATGCTTACTGGTCCTATTCCCACAGAGATCGGGGATGCTCTCAAGCTCCAAGGCCTATATCTTGGGAATAATCAGCTCACTAGAACGATCCCCGAAAGCCTGAGTCATTTGAATAGCTTGGTAAAGTTGAACCTAACTGGTAACAAGTTATCTGGTTCGGTTCCAAAAAGTCTTGGTGATCTGAAAGCATTAACTCATTTGGATTTAAGTTCCAATGAGCTGGATGGTGATCTTCCTTCTTCTCTGTCCAGCATGTTGAATCTTGTGGGGCTTTATGTACAAGAGAACAGGCTTTCTGGTCTGGTTGTTGAACTTTTCCCAAGTTCCATGACATGGAAGATTGAAACTTTGAATTTGAGTAGTAACTATTTCGAGGGTGTACTTCCACGAACATTGGGCAATCTTTCATACTTGACAACTTTGGATCTTCATGGGAATAAGTTTACAGGGCCGATCCCTTCTGAACTTGGGGATCTTATGCAACTCGAGTACTTTGATGTTTCGAAAAACAGGCTCTCAGGAGAGATTCCAGAGAAGATATGCAGCGTGGCCAATATGTTTTACCTGAATTTGGCTGAAAACAGTCTAGAAGGCCCGATTCCAAGAAGTGGCATTTGCCAGAATCTGTCCAAGACTTCACTTGCAGGTAACAAGGACCTTTGTGGGAGAATCATGGGTTTCAATTGCCAGATCAAAAGCTTGGAGAGATCTGCAGTCTTGAATGCTTGGAGCCTTGCTGGAATTATCGTCGTAAGTGTTCTTATTGTTCTTACCGTGGCATTCGCTATGCGGAGACAGATTATTAGAAACCACAGAGATAATGATCCAGAGGAAATGGAGGAAAGCAAACTAAACAGTTTTATAGATCCAAATCTCTATTTCTTAAGCAGCAGCAGATCGAAAGAGCCTTTAAGCATCAACGTGGCCATGTTCGAGCAGCCCCTTTTGAAATTAACCTTGGTTGATATCCTCGTAGCAACCAATAACTTCTGTAAAACGAACATTATTGGAGATGGAGGATTTGGGACCGTGTACAAGGCCACTTTGCCTGATGGAAAAATTGTTGCTGTGAAGAAGCTTAGCGAAGCAAAAACGCAGGGGCACAGAGAATTTATTGCTGAAATGGAAACTCTAGGTAAAGTAAAACATCATAATCTTGTTTCACTGCTTGGCTACTGCTCTCTTGGGGAGGAGAAGCTCCTTGTCTACGAGTATATGGTGAATGGCAGCTTGGATCTTTGGCTGAGAAACCGAATCGGAACTCTTGAAGTCCTTAACTGGGAGACTCGCTTCAAAGTCGCTTCCGGTGCAGCCCGTGGATTGGCATTTCTTCACCATGGATTCATCCCCCACATCATTCACAGAGATATCAAAGCAAGCAATATACTCCTCAACGAAGACTTCGAGCCAAAAGTTGCTGACTTCGGGTTGGCGAGACTGATCAGTGCTTGTGAGACTCATGTCACAACTGAGATTGCTGGAACCTTTGGCTACATCCCACCGGAGTACGGGCAGAGCGGGAGGTCTACCGCGAAAGGAGACGTTTATAGCTTTGGTGTGATTCTACTGGAACTGGTAACTGGGAAGGAACCAACAGGACCTGACTTCAAAGAGATTGAGGGTGGAAATCTGGTTGGTTGGGTGTTTCAGAAGATCAAGAAGGGTCAGGCTGCGGACGTCCTCGACACGACAGTTCTGAATGCTGATTCGAAGCATATGATGCTTCAAACTCTTCAGATTGCTTGTATTTGCCTGTCAGAAAATCCTGCTAACAGACCTTCCATGCTTCAGGTACTGAAGTTCCTCAAAGGGATAAAGGATGAG 3756 44.46 SEILPWNSLVPHCSWAGVSCRLGRVTELSLSSRSLKGQLSPSLFNILSLMVLDLSSNSLHGSIPPQISNLRSLKVLALGGNQFSGDFPVELTELTQLENLKLGTNLFTGEIPPELGNLKLLQTLDLSGNAFVGNVPAHIGNLTRILSLDLGNNLLSGSLPLTIFTELKSLTSLDISNNSFSGSIPPEIGNLQHLTDLYIGINHFSGELPPEVGKLALLENFFSPSCSLTGPLPEELSKLKSLSKLDLSYNPLGCSIPKSIGELQNLTILNLVYTELNGSIPAQLGRCRNLKTLMVSFNFLSGVLPQELSELPMLTFSAEKNQLSGPLPSWLGKWNHVDSILLSSNRFTGKIPPEIGNCSMLKHLSLSNNLLAGPIPKEICNAASLMEIDLDSNFLSGTIDDTFVQCRNLTELVLVDNQIVGTIPEYFSDLPLLVIDLDSNNFTGSLPRSIWNSVDLMEFSAANNRLEGHLPSEIGYAASLERLVLSNNRLTGTIPDEIGNLTDLSVLNLNSNLLEGTIPSLLGDCSKLTTLDLGNNSLDGSIPERLADLTELQCLVLSHNKLSGAIPFKPSAYFRQMTIPDLSFVQHHGVFDLSHNRLSGTIPDELGKCVVVVDLLLSNNLLSGEIPRSLSHLTNLTTLDLSGNMLTGPIPTEIGDALKLQGLYLGNNQLTRTIPESLSHLNSLVKLNLTGNKLSGSVPKSLGDLKALTHLDLSSNELDGDLPSSLSSMLNLVGLYVQENRLSGLVVELFPSSMTWKIETLNLSSNYFEGVLPRTLGNLSYLTTLDLHGNKFTGPIPSELGDLMQLEYFDVSKNRLSGEIPEKICSVANMFYLNLAENSLEGPIPRSGICQNLSKTSLAGNKDLCGRIMGFNCQIKSLERSAVLNAWSLAGIIVVSVLIVLTVAFAMRRQIIRNHRDNDPEEMEESKLNSFIDPNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILVATNNFCKTNIIGDGGFGTVYKATLPDGKIVAVKKLSEAKTQGHREFIAEMETLGKVKHHNLVSLLGYCSLGEEKLLVYEYMVNGSLDLWLRNRIGTLEVLNWETRFKVASGAARGLAFLHHGFIPHIIHRDIKASNILLNEDFEPKVADFGLARLISACETHVTTEIAGTFGYIPPEYGQSGRSTAKGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVFQKIKKGQAADVLDTTVLNADSKHMMLQTLQIACICLSENPANRPSMLQVLKFLKGIKDE 1252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1013841 1017596 - MC10g0141 Mch10g0170 677263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0170 1252 Gene3D Ribonuclease Inhibitor 3 92 IPR032675 -
Mch10g0170 1252 SUPERFAMILY Protein kinase-like (PK-like) 955 1246 IPR011009 -
Mch10g0170 1252 ProSiteProfiles Protein kinase domain profile. 974 1252 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0170 1252 Gene3D Transferase(Phosphotransferase) domain 1 1050 1251 - -
Mch10g0170 1252 FunFam serine/threonine-protein kinase BRI1-like 2 936 1049 - -
Mch10g0170 1252 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 581 877 - -
Mch10g0170 1252 SMART LRR_typ_2 501 525 IPR003591 -
Mch10g0170 1252 SMART LRR_typ_2 633 657 IPR003591 -
Mch10g0170 1252 SMART LRR_typ_2 705 728 IPR003591 -
Mch10g0170 1252 SMART LRR_typ_2 729 752 IPR003591 -
Mch10g0170 1252 SMART LRR_typ_2 167 191 IPR003591 -
Mch10g0170 1252 SMART LRR_typ_2 142 166 IPR003591 -
Mch10g0170 1252 SMART LRR_typ_2 779 803 IPR003591 -
Mch10g0170 1252 SMART LRR_typ_2 681 704 IPR003591 -
Mch10g0170 1252 SMART LRR_typ_2 46 70 IPR003591 -
Mch10g0170 1252 SMART LRR_typ_2 549 570 IPR003591 -
Mch10g0170 1252 SMART LRR_typ_2 239 263 IPR003591 -
Mch10g0170 1252 SMART LRR_typ_2 94 118 IPR003591 -
Mch10g0170 1252 Gene3D Phosphorylase Kinase; domain 1 937 1049 - -
Mch10g0170 1252 PRINTS Leucine-rich repeat signature 170 183 - -
Mch10g0170 1252 PRINTS Leucine-rich repeat signature 633 646 - -
Mch10g0170 1252 SUPERFAMILY L domain-like 578 866 - -
Mch10g0170 1252 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine rich repeat 384 442 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine rich repeat 758 816 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Gene3D Ribonuclease Inhibitor 165 314 IPR032675 -
Mch10g0170 1252 Gene3D Ribonuclease Inhibitor 576 875 IPR032675 -
Mch10g0170 1252 Gene3D Ribonuclease Inhibitor 315 575 IPR032675 -
Mch10g0170 1252 Pfam Leucine Rich Repeat 635 655 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine Rich Repeat 339 358 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine Rich Repeat 361 381 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine Rich Repeat 708 729 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine Rich Repeat 169 191 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine Rich Repeat 659 681 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine Rich Repeat 48 70 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine Rich Repeat 479 501 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine Rich Repeat 121 142 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine Rich Repeat 683 705 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine Rich Repeat 241 263 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Leucine Rich Repeat 591 609 IPR001611 GO:0005515(InterPro)
Mch10g0170 1252 Pfam Protein tyrosine and serine/threonine kinase 978 1245 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0170 1252 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 10 162 - -
Mch10g0170 1252 ProSitePatterns Protein kinases ATP-binding region signature. 980 1003 IPR017441 GO:0005524(InterPro)
Mch10g0170 1252 FunFam serine/threonine-protein kinase BRI1-like 2 1050 1252 - -
Mch10g0170 1252 FunFam Uncharacterized protein 315 579 - -
Mch10g0170 1252 SMART serkin_6 974 1246 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0170 1252 SMART LRR_sd22_2 633 648 - -
Mch10g0170 1252 SMART LRR_sd22_2 167 193 - -
Mch10g0170 1252 SMART LRR_sd22_2 657 680 - -
Mch10g0170 1252 SMART LRR_sd22_2 705 734 - -
Mch10g0170 1252 SMART LRR_sd22_2 239 265 - -
Mch10g0170 1252 SMART LRR_sd22_2 525 551 - -
Mch10g0170 1252 SMART LRR_sd22_2 803 829 - -
Mch10g0170 1252 SMART LRR_sd22_2 46 72 - -
Mch10g0170 1252 SMART LRR_sd22_2 406 432 - -
Mch10g0170 1252 FunFam leucine-rich repeat receptor protein kinase EMS1 165 314 - -
Mch10g0170 1252 SUPERFAMILY L domain-like 13 315 - -
Mch10g0170 1252 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 633 1250 IPR051564 GO:0016020(PANTHER)
Mch10g0170 1252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1096 1108 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0170 1252 Gene3D Ribonuclease Inhibitor 93 164 IPR032675 -
Mch10g0170 1252 SUPERFAMILY L domain-like 320 583 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0170 Mch-Chr10:1013841 Mch4g1482 Mch-Chr4:18330583 7.14E-97 dispersed
Mch9g1482 Mch-Chr9:17229565 Mch10g0170 Mch-Chr10:1013841 5.29E-45 dispersed
Mch10g0170 Mch-Chr10:1013841 Mch10g1082 Mch-Chr10:7953754 6.89E-83 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76992 PF07714 PK_Tyr_Ser-Thr 2.60E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0170 - - - 0.0