Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0197 ATGCCAAACCAAAATACGTTTCATACAATACAAATGGCGACAAATGCAAGAGCAGTCTTGTTTCTAATGCTCATGCTCGTGGTTTGTGTATCTGAAGGAGTTCTTGACGGCAATTATTACACAAAAACATGTCCAAATGCTGAGAAAATCATCCTCCAGACCGTTTACAATGCTTCCATTCATGACCCCCGAGTCCCTCCTCGGCTTCTCAGGCTCTTCTTCCATGACTGTTTCATAAGGGGATGTGATGCATCAGTGTTGATAGATTCAACGCCGGGGAAGCAGGCCGAGAAAGATGCACCTCCAAACATCTCGCTGAGGTCATTCTACGTGATCGACGAGGCCAAGGTGAAGCTGGAAACTGCTTGCCCGCGTACTGTTTCCTGTGCTGATATTGTCGCCATTGCTGCTAGAGATGTAGTAACTCTGTCTGGGGGACCATATTGGAGTGTACTGAAAGGAAGGAAAGATGGGAAGATTTCCAATGCTTCTGAAACCATCAACTTGCCAGCTCCAACTTTCAATGTTTCTCAACTCATCCAAAGCTTTTCAAACAGGGGATTACAAGTCAAAGACTTGGTTGCTCTATCTGGGGCTCACACTCTTGGATTCTCACACTGTTCTTCCTTCCAATCCAGACTCCGCAACTTCACCTCAATTCATCAAACTGATCCAACTCTGGAATCTGGGTTTGCGCAGATTCTAAGAGAGAAATGTCCAAAACCCAATTTGGACAAAAATGCTGGACAATTCTTGGACCCAACTTCCTCAACTTTTGACAATGTGTATTACAAGCGACTGATGGAAGGAAAGGGTGTGTTTGGTTCAGATCAAGCTCTGTTTGGTGATTCCAGAACCAGAAGGATTGTTGGGTCGTTTGCTAAAGATCAGAATTTGTTCTTCAAGGAGTTTTCAGCTTCAATGGTAAAATTGGGTAATGTTGGGGTCAGTGAAAACGGCGATGTCAGAGTCAATTGCAGGGTGGTGAACTGA 993 44.61 MPNQNTFHTIQMATNARAVLFLMLMLVVCVSEGVLDGNYYTKTCPNAEKIILQTVYNASIHDPRVPPRLLRLFFHDCFIRGCDASVLIDSTPGKQAEKDAPPNISLRSFYVIDEAKVKLETACPRTVSCADIVAIAARDVVTLSGGPYWSVLKGRKDGKISNASETINLPAPTFNVSQLIQSFSNRGLQVKDLVALSGAHTLGFSHCSSFQSRLRNFTSIHQTDPTLESGFAQILREKCPKPNLDKNAGQFLDPTSSTFDNVYYKRLMEGKGVFGSDQALFGDSRTRRIVGSFAKDQNLFFKEFSASMVKLGNVGVSENGDVRVNCRVVN 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1177379 1178968 + MC10g0166 Mch10g0197 677290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0197 330 FunFam Peroxidase 170 311 - -
Mch10g0197 330 FunFam Peroxidase 38 178 - -
Mch10g0197 330 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 CDD secretory_peroxidase 35 329 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch10g0197 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Mch10g0197 330 Gene3D - 38 330 - -
Mch10g0197 330 PANTHER PEROXIDASE 25-RELATED 29 326 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Mch10g0197 330 Pfam Peroxidase 54 296 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 Gene3D Peroxidase, domain 2 170 311 - -
Mch10g0197 330 ProSiteProfiles Plant heme peroxidase family profile. 34 330 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0197 330 SUPERFAMILY Heme-dependent peroxidases 35 330 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0197 Mch-Chr10:1177379 Mch1g1612 Mch-Chr1:17200436 2.41E-115 dispersed
Mch10g0197 Mch-Chr10:1177379 Mch8g0870 Mch-Chr8:6209238 1.50E-120 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0197 K00430 - csv:101210306 538.495