Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0212 ATGATGGTCGGAGATAGACGGGTGGGGCAGGTTGTATTAGCTGCCCGTGGAATAAGAGTTGCCCGAGAGCCTCTCCTTTGTTTTTCTGCTAGACGAGGAGGAGAAGTGGGGGAGGGGAAAGAAAATGGGTCGGAAAGGGAAAATAATATAATTTTTCTGAGACGAGAAAACGACGACGAGTTTCCTTCTGAGCCAAATTCCGCACCGCACCGTATTCCATTACTTGGTTATAATATACACTTTTTTGCCGATGATGATTCTCCTCAGCGAGACATACTCGACGGAGAGTTCCTGCTTCGGATGGTTCCGATGACGGCGGCTTGTTGTAGAATGCCAAGCGAAGATGAGGGAGATTCGCCGGCCAAATGCCGAGAGCGCCGGCGCCGTAGAATAGAGATGAGACGATTGGCTACAACATCGTCGGCGAATCCGTCGCCCTCGACCAGTCACCACCGGAAAGAGAATAATCAAACTGAGAAGAAACGTGTTCGGAAGACGGACGGCAGCGCTACTCCGGAAATTTCGTCGTCTTCGTCATCGGGGGAGGACGTGAAGACTGCAGTCGCTTCACCGTCGGTACCTCAGCCGGTGTTCGGGATGATGTCGGTGTCCGGGAGGTCACGTGAGATGGAGGACGCAGTATCGGCGAGCACGTGCCTTCTCGGTCCGGAAAATTGCCGGCGGCGACCGGTGCATTTTTTCGCCGTCTATGATGGACACGGAGGCCCTCACGTGGCAGCGCTTTGTAGGGAGAAGATGCACGTGTTAGTACAGGAGGAATTGGCGCGCGTGGTAGGCACGCGCGATGAAGCTGAGAGTGGCGGCGGAAGCAGCTCGGCGGAGGAGCTTACGCTCGAGGAGGAGGAGGCTACTTGGAGAAGAGTGATGCAGAGGAGCTTTGAGAGAATGGACGAGGTGGCGCTCAGTACTTGTGCCTGTGGGAGCGTCGGTGGCCAGTGTGGGTGCCATCCTATGGAGGTGGCTCTCGGCGGCTCCACCGCCGTAGTCGCCGCCCTCACGCCGAATCACATAGTCGTCGCCAACTGCGGTGACTCACGCGCCGTCCTCTGCCGTGGAGGGAGGGCGATTCCGCTTTCCAACGATCACAAGCCTGATAGAATCGATGAACTAGCAAGGATTGAAGCTGCTGGAGGACGGGTGATTTTTGTAAATGGAGCTCGGGTTGAAGGCATCCTTGCAATGTCCCGTGCAATAGGCGACAAGTATCTAAAGTCAGTTGTAATATCAGAGCCTGAAGTTACTTTCACGGTAAGAGAACCAGGTGATGAATGTTTAATACTTGCAAGTGATGGATTGTGGGATGTTCTCTCAAGTGACTTGGCTTGTGAGGTAGCTCGTGAATGTCTTCAAGAAGGAACGACGATAGCTGCTACTACGACGATAGACCTCAATGCAGTGCCTCAAATAGAAGAAGAAGGATCTGGGACTTTATATCCTTCTCGAAGTGCATTAGCTGCTGCACTGCTTACTCGGCTTTCTTTGGGGCGAAAAAGTACAGACAACATCAGTGTCATAGTTATTGATCTTAAGAGGAGC 1557 53.11 MMVGDRRVGQVVLAARGIRVAREPLLCFSARRGGEVGEGKENGSERENNIIFLRRENDDEFPSEPNSAPHRIPLLGYNIHFFADDDSPQRDILDGEFLLRMVPMTAACCRMPSEDEGDSPAKCRERRRRRIEMRRLATTSSANPSPSTSHHRKENNQTEKKRVRKTDGSATPEISSSSSSGEDVKTAVASPSVPQPVFGMMSVSGRSREMEDAVSASTCLLGPENCRRRPVHFFAVYDGHGGPHVAALCREKMHVLVQEELARVVGTRDEAESGGGSSSAEELTLEEEEATWRRVMQRSFERMDEVALSTCACGSVGGQCGCHPMEVALGGSTAVVAALTPNHIVVANCGDSRAVLCRGGRAIPLSNDHKPDRIDELARIEAAGGRVIFVNGARVEGILAMSRAIGDKYLKSVVISEPEVTFTVREPGDECLILASDGLWDVLSSDLACEVARECLQEGTTIAATTTIDLNAVPQIEEEGSGTLYPSRSALAAALLTRLSLGRKSTDNISVIVIDLKRS 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1298411 1306034 - MC10g0178 Mch10g0212 677305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0212 519 MobiDBLite consensus disorder prediction 169 186 - -
Mch10g0212 519 ProSiteProfiles PPM-type phosphatase domain profile. 197 516 IPR001932 -
Mch10g0212 519 Pfam Protein phosphatase 2C 198 469 IPR001932 -
Mch10g0212 519 CDD PP2Cc 197 516 IPR001932 -
Mch10g0212 519 MobiDBLite consensus disorder prediction 152 168 - -
Mch10g0212 519 SUPERFAMILY PP2C-like 193 517 IPR036457 -
Mch10g0212 519 ProSitePatterns PPM-type phosphatase domain signature. 233 241 IPR000222 GO:0043169(InterPro)
Mch10g0212 519 MobiDBLite consensus disorder prediction 136 151 - -
Mch10g0212 519 PANTHER PROTEIN PHOSPHATASE 156 515 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch10g0212 519 MobiDBLite consensus disorder prediction 133 200 - -
Mch10g0212 519 FunFam Protein phosphatase 2C 50 220 519 - -
Mch10g0212 519 SMART PP2C_4 187 514 IPR001932 -
Mch10g0212 519 Gene3D - 184 519 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0212 Mch-Chr10:1298411 Mch3g0195 Mch-Chr3:2450485 5.75E-88 dispersed
Mch10g0212 Mch-Chr10:1298411 Mch6g0853 Mch-Chr6:5919257 7.14E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0212 K14497 - csv:101206634 618.231