Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0213 CGCTCCCCCTCGATTCCACTTCATTTCTCTCTCTCTCTTCTTCCAAGAACAAACACACACAGAGAAATCCCCCTCTCTCTGCTTCAGAAAATGGCTGTCAAATGCTTGGGTTTGCTGCTGTTTTTCAACTGTTTGCTTCTTTCCAGCTCTCAGTTTTTGAAAACTTATGTTGTCCAAATGGATAGGTCTGCAATGCCGGAGTCATTTTCCGATCACCTTGAGTGGTATTCCGCGGTGGTAGACAGTGTGACTATCAACACCGAGAAAGAAGGTGGGAGTGGGGGAGATGAACAGAGGAGGGTAATTTACAGTTACCACAACGTTTTCCATGGAGTTGCAGCTCGCTTGAGTGAAGAAGAGGCTGAGAGGCTCGAGGAAGAAGATGGGGTGTTGGCCATTTTTCCGGAGACTAAGTACCAGCTCCACACCACGAGAAGCCCCAAATTTCTTGGGCTTGATTCAGCCGACAGCAATAGCGCTTGGTCACAGCAAATTGCAGACCATGATGTGATTGTTGGAGTTCTGGACACCGGGATTTGGCCGGAGAGTGAGAGCTTTGACGACGCCGGAATGACGCCGGTGCCGGCGCATTGGAAAGGGGAATGTGAAACAGGGCGAGGCTTCACGAAACAGAATTGTAATAGAAAGATCGTCGGCGCCAGAGTGTTTTACCGTGGGTATGAAGCTGCTGCTGGGAAATTTAACGAACGGTTGGAGTACAAATCGCCGAGGGATCAAGATGGCCATGGAACTCACACGGCAGCCACCGTGGCCGGCTCCCCTGTAGCCGGCGCGAGCCTCCTCGGCTATGCTTATGGAACGGCCAGAGGAATGGCGCCCGGCGCTAGAATTGCCGCGTACAAAGTGTGCTGGGTGGGTGGCTGCTTCAGCTCCGACATTTTGTCGGCTGTGGACAGAGCGGTGGCCGACGGAGTAAATGTTCTGTCCATCTCTTTAGGAGGTGGGGTCTCTTCCTATTACCGTGATACCCTCTCAGTTGCAGCATTTGGGGCAATGGAGATGGGCGTTTTTGTCTCCTGCTCGGCCGGAAATGGAGGGCCGGACCCTGTCAGCCTCACAAACGTATCGCCATGGATTACCACCGTCGGCGCCAGTACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGCGATGGCAGAACAGTCACCGGCGTTTCACTTTACAGAGGAAGAGTCACGATTCCAGAGAACAAACAATTCCCAGTCGTCTATATGGGGAGTAACTCGAGCAGTCCTGATCCGAGTTCTCTGTGTTTGGAAGGGACTTTAGATCCCCATTTTGTGGCCGGGAAAATTGTGATATGCGATCGCGGAATTAGCCCTCGGGTCCAGAAGGGCGTGGTGGTGAAGAATGCAGGTGGAATTGGGATGATTCTGTCGAACACGGCGGCGAATGGGGAAGAACTTGTTGCAGACTGCCATTTGGTACCGGCCGTCGCCGTCGGGGAAAGAGAAGGTAAAGCAATTAAGCATTACGCCTTAACGAATCCAAAAGCGACGGCGAGTCTAGGGTTTTTAGGAACGAGATTAGGAGTGAAACCGTCGCCGGTGGTGGCGGCGTTTTCTTCCAGAGGACCAAACTTCCTCACTCTGGAAATTCTGAAGCCCGATCTGGTGGCTCCCGGCGTCAACATCCTCGCCGCCTGGACCGGAAAAACAGGGCCGTCGAGCTTGTCGACCGATTCCCGAAGGGTTAAATTCAACATTCTCTCTGGAACTTCAATGTCGTGCCCTCACGTGAGCGGCGTCGCGGCTCTGATCAAATCGAAGCATCCCGATTGGAGCCCGTCGGCGATCAAATCGGCGCTCATGACCACCGCGTATGTCCATGACAACACGTATAATCCTCTCAAAGATGCCTCCGTCTCCTCGCCGTCGAGTCCGTACGACCATGGCGCCGGCCACATAAACCCTAGAAAAGCCCTCGACCCTGGGTTGGTTTACGAAATCCAGCCGCAAGATTACTTCGAATTCCTCTGTACGCAGGATTTAACCCCTTCTCAGCTCAAAGTCTTCTCCAAATATACGAACAGATCCTGCCATGGCCTTCTCCGCAACCCTGGAGATTTGAATTACCCGGCGATCTCCGCCGTTTTCCCTGAGAAAACCTCCATCACTTCCCTGACCCTTCACAGAACCGTCACCAACGTCGGCCACGCAGCGTCCAGCTACCGCGCGGTGGTCAGTCCGTTCAAGGGCGCCGCCGTGAAAGTTGAGCCGGAGAATCTGAACTTCACGAGGAGATATCAGAAGCTGTCTTACAAAATCACTTTTGTGACAAAGAAGAGGCAGAGTATGCCGGAATTTGGAGGGCTGATCTGGAAAGATGGAACTAACAGAGTGAGAAGCCCCATCGTCATCACTTGGTTGTCGTTTGTT 2403 52.93 RSPSIPLHFSLSLLPRTNTHREIPLSLLQKMAVKCLGLLLFFNCLLLSSSQFLKTYVVQMDRSAMPESFSDHLEWYSAVVDSVTINTEKEGGSGGDEQRRVIYSYHNVFHGVAARLSEEEAERLEEEDGVLAIFPETKYQLHTTRSPKFLGLDSADSNSAWSQQIADHDVIVGVLDTGIWPESESFDDAGMTPVPAHWKGECETGRGFTKQNCNRKIVGARVFYRGYEAAAGKFNERLEYKSPRDQDGHGTHTAATVAGSPVAGASLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDTLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGDGRTVTGVSLYRGRVTIPENKQFPVVYMGSNSSSPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGIGMILSNTAANGEELVADCHLVPAVAVGEREGKAIKHYALTNPKATASLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLSTDSRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYNPLKDASVSSPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFEFLCTQDLTPSQLKVFSKYTNRSCHGLLRNPGDLNYPAISAVFPEKTSITSLTLHRTVTNVGHAASSYRAVVSPFKGAAVKVEPENLNFTRRYQKLSYKITFVTKKRQSMPEFGGLIWKDGTNRVRSPIVITWLSFV 801
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1322897 1325299 - MC10g0179 Mch10g0213 677306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0213 801 Pfam Fibronectin type-III domain 697 795 IPR041469 -
Mch10g0213 801 SUPERFAMILY Subtilisin-like 141 654 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch10g0213 801 PRINTS Subtilisin serine protease family (S8) signature 579 595 IPR015500 -
Mch10g0213 801 PRINTS Subtilisin serine protease family (S8) signature 167 186 IPR015500 -
Mch10g0213 801 PRINTS Subtilisin serine protease family (S8) signature 245 258 IPR015500 -
Mch10g0213 801 CDD PA_subtilisin_like 382 511 - -
Mch10g0213 801 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 55 794 IPR045051 -
Mch10g0213 801 Pfam Subtilase family 168 621 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch10g0213 801 Gene3D Peptidase S8/S53 domain 169 663 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch10g0213 801 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 46 142 IPR037045 -
Mch10g0213 801 FunFam Subtilisin-like protease SBT1.9 44 142 - -
Mch10g0213 801 FunFam Subtilisin-like protease SBT1.5 169 388 - -
Mch10g0213 801 CDD Peptidases_S8_3 139 616 IPR034197 -
Mch10g0213 801 Gene3D - 667 798 - -
Mch10g0213 801 Gene3D - 375 519 - -
Mch10g0213 801 ProSitePatterns Serine proteases, subtilase family, serine active site. 580 590 IPR023828 -
Mch10g0213 801 Pfam Peptidase inhibitor I9 55 142 IPR010259 -
Mch10g0213 801 ProSiteProfiles Serine proteases, subtilase domain profile. 138 650 - -
Mch10g0213 801 FunFam subtilisin-like protease SBT1.5 375 518 - -
Mch10g0213 801 Pfam PA domain 409 497 IPR003137 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0213 Mch-Chr10:1322897 Mch1g1263 Mch-Chr1:14859196 3.58E-284 dispersed
Mch8g2621 Mch-Chr8:29456335 Mch10g0213 Mch-Chr10:1322897 8.46E-106 transposed
Mch10g0213 Mch-Chr10:1322897 Mch6g2565 Mch-Chr6:27550290 5.72E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0213 - - - 0.0