Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0269 ATGGCTGATTCCAGGGCTCTTCCTGCTCGCTGCGCAGTGGGGATCGTTAAGAGTATCCGCCTGGAGAACTTCATGTGTCACAGCAACTTGCATATTGAGTTTGGCGAGTGGGTTAATTTCATTACTGGTCAGAACGGAAGTGGCAAGAGTGCTATATTGACTGCTTTATGTGTGGCATTCGGCTGTCGAGCTAAAGGAACCCAAAGGGCATCAACGTTGAAGGATTTTATTAAAACTGGTTGCAGTCATGCTGTCATCCATGTTGAATTGAAAAATAATGGGGAGGATGCTTTTAAGCATGGAATATATGGTGACGTCATAATTATTGAGAGAAGGATTTCTGAATCCACCAGTGGTATTGTTTTGAAGGACTCTCAAGGAAAAAAGGTTGCAGGTCGGAGGGATGAACTTCGAGAGCTAGTAGAACATTTTAATATAGATGTTGAGAATCCATGTGTAATAATGAGTCAGGACAAAAGTAGAGAGTTCCTGCATTCTGGGAACGACAAAGACAAATTTAAGTTCTTTTTCAAGGCTACTCTTCTTCAGCAAGTTGATGATCTATTGAAAAACATTTTTGATCAATTGAGATCTTCGAATGCGCTTGTTGATGACTTGGAGTCTACCATACGACCTGTAGAGAAGGAACTAAATGAGCTGCAAGTAAAAATTAGAAACATGGAGCATGTAGAAGAAATCTCTCAACAGGTCCAACATTTAAAGAAAAAGCTTGCTTGGTCATGGGTATATGATGTAGACAAACAACTTCAAGAGCATAGTGCAAAAATAGGAAAGCTCAAAGATCGCGTTCCTATTTGTCGAGCAAAAATTGATCATCAAGTGGGTCTGGTGGAAAAGTTAAGAGAACGTCATATCGAGAAGAAGGCTCAAATTGCAAGCATGATGGAGAAAACTTCCGAAGTGAGAAGAATGAAGGATGAATTGCAAGAAACCCTTTCCTTGGCAACAAGAGAGAATCACGGACTTGAAGAGGAGCATTGCCGCAAAATGAACTACATCCAAAAGATGGTTAAGCGTGCTAGGCTGCTTGAGCAACAAGTTCATGATATTCATGAGCAGCACATGAAAAATACACAGGCTGAAGAATCTGAAATTGAGGAAAAGTTGAAGGAACTCGAATTGGAGTCTGAAGCTGCTAAATCAACAGTAATGAGGTTGAAGGAGGAGGAGAATGCCTTATTGGATAGCCTACAAAGTGTGAGAAGTGAAATAAAAAGGATTGCTGAAGAGATTGAAGGTTATGAGAAAAGGCATTACGAATTTTCTCACTCTATTCGAGAGCTTCGGCGACATCAAACAAACAAGGTCACAGCTTTCGGAGGTGATAGGGTCATTCAATTATTACGTGCAATTGAGAGACAACATCAAAGATTCAAGAAACCTCCCATTGGCCCAATTGGTTCCCATCTGAATTTGGTTAACGGTGATATGTGGGCTCCTGCTGTTGAAAATGCCATCGGGAGGTTGCTCAATGCTTTCATTGTGACTGATCATCGAGATTCTCTTCTTTTGAGAGGATGTGCAAATGAAGCTAATTATAAGCAACTCCCGATTATCATCTATGACTTTTCAAGACCATTGTTAAATATTCCAGCTCACATGCTTCCTCAAACAGAGCACCCTACAACCCTTTCAGTCGTTCACTCTGAAAACCATACTGTCATCAATGTTTTGGTAGATAAGGGTGATGCTGAGAGGCAAGTGCTCGTTAAAGATTATGATGTGGGTAAATCAGTCGCATTTGACCAACGGATCTCAAACCTCAAGGAGGTTTATACATTAGATGGATACAAAATGTTTTCTCGTGGTTCTGTTCAGACAATTCTTCCCCCAGCTAGGAGACCTAGAAGTGGCAGACTATGTAGTTCTTTTGATGATCACATCAAAAGTCTTGAAAGAGATGTATTGAATGTAAAAGAAGAAACCGAGCGATGTAGGAAGAGGAAGAGAGCTGCAGAAGAACAACTCGGGGATCTTGACGAGAACCTAAGCAATGCAAAGGTGAAGTGTCGGAGTGCGGAACACTTTTTAATGTCCAAAAATTTGGAGCTGCAAGATTTACGGAAGTCGCAAGTTGCTGAAACTAATTCATTACCTTCATCAAATGTTGATGAGCTTCATCAAGAAATTTCTAAAATCCAAGAGGAGATACAAGAGAATGAGATGCTACTGGAAAAGTTGAGAGTTAGAAAGAAAGAAGCGGAAGCAAAGACAAAAGATCTTAAAGTATCATTTGAGAATCTGTGTGAGTCGGCAAAAGGAGAAGTTGATGCATTTGAAGAAGCTGAGAGAGAGATGTTGCAGATTGAACGAGATCTGCATTCTTCAGAAAAGGAAAAGGATCATTATGAAGGTATTATGGCTAACAAGGTCCTTTCTGATATCAAAGAAGCAGAGAGACAATATGAGGAGCTTGAGCGCCACCGTAAGGAGAGTTACAGTAAGGCTTCAATAATATGTCCTGAGAGTGAAATTGAGGCTTTAGGTGATTGGGATGGGAGCACACCTGAACAACTCAGTGCACATTTAACGAGGCTAAATCAGAGACTTAACAATGAGACCCGGCGATGTTCTGAATCTCTGGAAGACCTGAGAATGATGTATGAGAAAAAGGAACGTACAATCATAAGAAAACAACAGACTTACAGAACTTTTAGAGAGAAGTTGAATGCTTGCCAGAAAGCTCTAGAGCTGCGGCGCAGAAAGTTTGAAAGGAATGCTAATCTTTTGAAGCGCCAATTGACTTGGCAGTTTAATGGTCATTTAAGGAAAAAAGGGATCAGTGGACATATAAAAGTTAATTACGAGGAAAAGACCCTCTCAATTGAGGTGAAGATGCCCCAAGATGCATCCAGCAGTTCTGTTCGTGATACCCGTGGACTTTCAGGTGGAGAACGGTCATTCTCAACTCTATGCTTTACTTTAGCGTTACATGAAATGACAGAAGCCCCATTTCGCGCAATGGATGAGTTTGATGTGTTTATGGATGCAGTAAGTCGAAAGATCAGCTTAGACACTCTCGTGGATTTTGCATTGGCACAAGGCTCCCAATGGATATTTATTACCCCTCATGAAATCGGG 3102 40.91 MADSRALPARCAVGIVKSIRLENFMCHSNLHIEFGEWVNFITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGCSHAVIHVELKNNGEDAFKHGIYGDVIIIERRISESTSGIVLKDSQGKKVAGRRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVDDLLKNIFDQLRSSNALVDDLESTIRPVEKELNELQVKIRNMEHVEEISQQVQHLKKKLAWSWVYDVDKQLQEHSAKIGKLKDRVPICRAKIDHQVGLVEKLRERHIEKKAQIASMMEKTSEVRRMKDELQETLSLATRENHGLEEEHCRKMNYIQKMVKRARLLEQQVHDIHEQHMKNTQAEESEIEEKLKELELESEAAKSTVMRLKEEENALLDSLQSVRSEIKRIAEEIEGYEKRHYEFSHSIRELRRHQTNKVTAFGGDRVIQLLRAIERQHQRFKKPPIGPIGSHLNLVNGDMWAPAVENAIGRLLNAFIVTDHRDSLLLRGCANEANYKQLPIIIYDFSRPLLNIPAHMLPQTEHPTTLSVVHSENHTVINVLVDKGDAERQVLVKDYDVGKSVAFDQRISNLKEVYTLDGYKMFSRGSVQTILPPARRPRSGRLCSSFDDHIKSLERDVLNVKEETERCRKRKRAAEEQLGDLDENLSNAKVKCRSAEHFLMSKNLELQDLRKSQVAETNSLPSSNVDELHQEISKIQEEIQENEMLLEKLRVRKKEAEAKTKDLKVSFENLCESAKGEVDAFEEAEREMLQIERDLHSSEKEKDHYEGIMANKVLSDIKEAERQYEELERHRKESYSKASIICPESEIEALGDWDGSTPEQLSAHLTRLNQRLNNETRRCSESLEDLRMMYEKKERTIIRKQQTYRTFREKLNACQKALELRRRKFERNANLLKRQLTWQFNGHLRKKGISGHIKVNYEEKTLSIEVKMPQDASSSSVRDTRGLSGGERSFSTLCFTLALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFITPHEIG 1034
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1728075 1745411 - MC10g0224 Mch10g0269 677362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0269 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 1029 IPR027417 -
Mch10g0269 1034 Coils Coil 766 786 - -
Mch10g0269 1034 SUPERFAMILY Smc hinge domain 452 611 IPR036277 GO:0005515(InterPro)|GO:0005524(InterPro)|GO:0005694(InterPro)|GO:0051276(InterPro)
Mch10g0269 1034 Coils Coil 635 676 - -
Mch10g0269 1034 Gene3D - 839 1033 IPR027417 -
Mch10g0269 1034 Coils Coil 203 223 - -
Mch10g0269 1034 Coils Coil 312 332 - -
Mch10g0269 1034 Pfam RecF/RecN/SMC N terminal domain 16 1029 IPR003395 -
Mch10g0269 1034 Coils Coil 340 360 - -
Mch10g0269 1034 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 13 1033 - GO:0000724(PANTHER)|GO:0003684(PANTHER)|GO:0003697(PANTHER)|GO:0005634(PANTHER)|GO:0030915(PANTHER)|GO:0035861(PANTHER)
Mch10g0269 1034 Gene3D - 16 272 IPR027417 -
Mch10g0269 1034 Coils Coil 850 888 - -
Mch10g0269 1034 Coils Coil 795 822 - -
Mch10g0269 1034 Coils Coil 362 424 - -
Mch10g0269 1034 Coils Coil 710 751 - -
Mch10g0269 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 300 IPR027417 -
Mch10g0269 1034 Coils Coil 284 304 - -
Mch10g0269 1034 Gene3D - 628 800 - -
Mch10g0269 1034 Coils Coil 900 920 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0269 Mch-Chr10:1728075 Mch9g0589 Mch-Chr9:4362932 1.86E-15 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0269 K22804 - csv:101208493 1780.76