Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0284 ATGACCCAGATGCTCAATCTAGCTCTTGGAGCTGTTTTAGTTACAATTTTGGTCATTCTCCTTGTTGTCTTCTTGAACCGGAGGGGAAGGGGAAAAGACGAGTACTACAATGACATAGAGAGCAAACAGCAGAGAGAAAAAGGGGATGAAGAGAGGGAAGAATTGGTGAGTTTTGAAGGTGGACAGGACCTGACCATTGTGGATGTATTGGAAGCTCCTGGTGAAGTGATTGGGAAAGCCAACCATGGAACTTTGTACAAGGCCTATTTGCAGGGAAGTAGCACAGTGAGGCTGCTGAGGTTTCTGAGGCCAGTTTGCACTTCTGGGCTTCAAGAATTTGTCTCTGAGATTCAGTTTTTGGGTTCCATAAGGCACCCAAATTTGGTGCCTCTTTTGGGTTTCTATTCAGGGCCAAGAGCAGAGAAGCTTCTCATTCATCCATTTTACAGGAGAGGAAATCTGGCTCAGTTCATTAGAGATGGGAATAGCGATTCGCATCGATGGGGAGTTATATTAAAGATCTCGGTCGGTATAGCCAAAGGGTTGGATCATCTCCACACTGGCCTGAAAAAGCCAATAATCCATGGGAATCTACAGTCGAAGAATGTTCTTTTGGATCGAAACTTCGAACCGTATGTCTCCGATTTCGGCCTGCATCTACTGTTGAATTCCCCTTCTGCTCAAGAGGTACTTGAGGCTTCAGCAGCTAATGGCTACAAAGCTCCTGAGCTGATCAAGATGAAAGATGCAGCTGAGGAGACTGACGCCTATAGCTATGGCGTGATCTTACTTGAGTTACTGTCCGGGAGGGAACCGATCAACGAAAAGCCGACTCCTGATGAGGATTTCTACTTGCCTAGCTTTATGCGAAACGCGGTTCTTGGACATAGAATTGCAGATTTGTTCCATCCAGAAATACTTCTCTATAGCAGCATTGATGGAAATGCTGTCACTGAAGAAAAGATTCTCCAATTCTTTCAGCTTGCTATGGCTTGTTGTTCTCCTTCTCCTGCTCTTAGACCTAGTATGAAGCAAGTGCTACGCAAGCTCGACGAAATCGGAACATAA 1068 45.32 MTQMLNLALGAVLVTILVILLVVFLNRRGRGKDEYYNDIESKQQREKGDEEREELVSFEGGQDLTIVDVLEAPGEVIGKANHGTLYKAYLQGSSTVRLLRFLRPVCTSGLQEFVSEIQFLGSIRHPNLVPLLGFYSGPRAEKLLIHPFYRRGNLAQFIRDGNSDSHRWGVILKISVGIAKGLDHLHTGLKKPIIHGNLQSKNVLLDRNFEPYVSDFGLHLLLNSPSAQEVLEASAANGYKAPELIKMKDAAEETDAYSYGVILLELLSGREPINEKPTPDEDFYLPSFMRNAVLGHRIADLFHPEILLYSSIDGNAVTEEKILQFFQLAMACCSPSPALRPSMKQVLRKLDEIGT 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1827667 1830148 - MC10g0235 Mch10g0284 677377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0284 355 Gene3D Transferase(Phosphotransferase) domain 1 150 355 - -
Mch10g0284 355 Pfam Protein tyrosine and serine/threonine kinase 75 350 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0284 355 Gene3D Phosphorylase Kinase; domain 1 71 148 - -
Mch10g0284 355 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 7 354 IPR052451 -
Mch10g0284 355 SUPERFAMILY Protein kinase-like (PK-like) 74 350 IPR011009 -
Mch10g0284 355 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0284 Mch-Chr10:1827667 Mch2g0784 Mch-Chr2:5394060 2.70E-54 dispersed
Mch10g0284 Mch-Chr10:1827667 Mch6g2650 Mch-Chr6:28203482 4.65E-108 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76997 PF07714 PK_Tyr_Ser-Thr 2.60E-31 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0284 - - - 0.0