Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g0284 | ATGACCCAGATGCTCAATCTAGCTCTTGGAGCTGTTTTAGTTACAATTTTGGTCATTCTCCTTGTTGTCTTCTTGAACCGGAGGGGAAGGGGAAAAGACGAGTACTACAATGACATAGAGAGCAAACAGCAGAGAGAAAAAGGGGATGAAGAGAGGGAAGAATTGGTGAGTTTTGAAGGTGGACAGGACCTGACCATTGTGGATGTATTGGAAGCTCCTGGTGAAGTGATTGGGAAAGCCAACCATGGAACTTTGTACAAGGCCTATTTGCAGGGAAGTAGCACAGTGAGGCTGCTGAGGTTTCTGAGGCCAGTTTGCACTTCTGGGCTTCAAGAATTTGTCTCTGAGATTCAGTTTTTGGGTTCCATAAGGCACCCAAATTTGGTGCCTCTTTTGGGTTTCTATTCAGGGCCAAGAGCAGAGAAGCTTCTCATTCATCCATTTTACAGGAGAGGAAATCTGGCTCAGTTCATTAGAGATGGGAATAGCGATTCGCATCGATGGGGAGTTATATTAAAGATCTCGGTCGGTATAGCCAAAGGGTTGGATCATCTCCACACTGGCCTGAAAAAGCCAATAATCCATGGGAATCTACAGTCGAAGAATGTTCTTTTGGATCGAAACTTCGAACCGTATGTCTCCGATTTCGGCCTGCATCTACTGTTGAATTCCCCTTCTGCTCAAGAGGTACTTGAGGCTTCAGCAGCTAATGGCTACAAAGCTCCTGAGCTGATCAAGATGAAAGATGCAGCTGAGGAGACTGACGCCTATAGCTATGGCGTGATCTTACTTGAGTTACTGTCCGGGAGGGAACCGATCAACGAAAAGCCGACTCCTGATGAGGATTTCTACTTGCCTAGCTTTATGCGAAACGCGGTTCTTGGACATAGAATTGCAGATTTGTTCCATCCAGAAATACTTCTCTATAGCAGCATTGATGGAAATGCTGTCACTGAAGAAAAGATTCTCCAATTCTTTCAGCTTGCTATGGCTTGTTGTTCTCCTTCTCCTGCTCTTAGACCTAGTATGAAGCAAGTGCTACGCAAGCTCGACGAAATCGGAACATAA | 1068 | 45.32 | MTQMLNLALGAVLVTILVILLVVFLNRRGRGKDEYYNDIESKQQREKGDEEREELVSFEGGQDLTIVDVLEAPGEVIGKANHGTLYKAYLQGSSTVRLLRFLRPVCTSGLQEFVSEIQFLGSIRHPNLVPLLGFYSGPRAEKLLIHPFYRRGNLAQFIRDGNSDSHRWGVILKISVGIAKGLDHLHTGLKKPIIHGNLQSKNVLLDRNFEPYVSDFGLHLLLNSPSAQEVLEASAANGYKAPELIKMKDAAEETDAYSYGVILLELLSGREPINEKPTPDEDFYLPSFMRNAVLGHRIADLFHPEILLYSSIDGNAVTEEKILQFFQLAMACCSPSPALRPSMKQVLRKLDEIGT | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1827667 | 1830148 | - | MC10g0235 | Mch10g0284 | 677377 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g0284 | 355 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 355 | - | - | |
Mch10g0284 | 355 | Pfam | Protein tyrosine and serine/threonine kinase | 75 | 350 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g0284 | 355 | Gene3D | Phosphorylase Kinase; domain 1 | 71 | 148 | - | - | |
Mch10g0284 | 355 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED | 7 | 354 | IPR052451 | - | |
Mch10g0284 | 355 | SUPERFAMILY | Protein kinase-like (PK-like) | 74 | 350 | IPR011009 | - | |
Mch10g0284 | 355 | ProSiteProfiles | Protein kinase domain profile. | 71 | 353 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0284 | Mch-Chr10:1827667 | Mch2g0784 | Mch-Chr2:5394060 | 2.70E-54 | dispersed | |
Mch10g0284 | Mch-Chr10:1827667 | Mch6g2650 | Mch-Chr6:28203482 | 4.65E-108 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76997 | PF07714 | PK_Tyr_Ser-Thr | 2.60E-31 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g0284 | - | - | - | 0.0 |