Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0292 GTGCTCGACCCGCGCTGCCGGTGGGTCCAGCGCTGGAACCGCGTAGTGCTGCTGGCGCGTGCAGCGTCCCTCGCGGTCGACCCGCTCTTCTTTTACGTGATCTTTCTGACCAAGGCCGGCCCGCCGTGCTTCTACCGGGACGCGGCCTTCGCCGCCGTCGTCACCGCCGCCCGCACGTGCGTCGACCTGGTGCATGTGTGCCACGTGTGGCTGCATTTCCGGCTGGCGTATGTTTCGACGGCGTCGTTGGTGGTCGGGAGTGGGAGCCTCGTGTGGGACGCACGTGCGGTTGCTTCTCATTATGTGAGGTCCTTCAAGGGATTCTGGCTCGATTTGTTTGTCATTATTCCCATTCCTCAGGTTGTGACATGGTTGGTTGTGCGGAAACTATTGAGAGAAGAAGAGATAAAAGAGGTGATGAGAGTGGTGTTAGTGAGCTACCTATTTCAGTTCTTTCCAAAGCTTTACCACAGCATTTACTTGATGAACAAACTCCAAAAGGTCACTGGCTACATCTTTGGCAGCATTTGGTGGCGTTTTAGCCTCAATGTCTTTGCCTATTTGATTGCCTCTCATGTTGCGGGAGGTTGCTGGTATCTCCTCGCAACGCAGCGGCTAATCTCGTGCCTTGAGCAACAATGCGAGAGAAGAAAAATGTGCAAACTGGCATTGTCTTGCTCAGGCCTCAACTCTCCCATATCGGGCTACAAGGGGGTCGGTAAATTCGTTTCCTCCCGTGGCAATAACTCGACGACGATCAAGTCGTTATGCTTGGAGGTCAATGGACCCTTCAGCTATGGAATTTATGAGCCTGTTCTTTTGGTATTCTCTAGTAACTCTCTAGCCGTTAGAATTCTTTATCCTGTCTTCTGGGGTTTATTGAATCTAAGTTCCTTTGGCAATGAACTTGATCCCACAAGTGATTTGGTGGAAGTGATATTCAGTTGCTGCATCACACTTGCAGGATTGGTGCTTTTTGTCACCCTAATTGGAAATATACAGATTTTCTTGCAAACTGTCATGGCAAGTAAAGAGACGATGCAAATACGGTTTCGAGAAATGAACTGGTGGATGAAGAGGCGACAATTGCCCGTCCATTTGAGGGAAAGAGTTTGCAATTTTGAATATCAAAGGTGGGTAGCAATGGGAGGGCTAGACGAGACCGAGCTCATTGGAGGGCTGCCTGATGGCCTCCGCCGTGACATCAAACGCTACCTTTGTTTAGACCTCGTTAGGAAGGTACCTTTCTTTCACATGTTGGATGATCTTATACTCGACAACATTTGTGATCGGGTTAAACCACTCTTGTATGCCAAAGGTGAAAAGATAGTGAGGGAGGGAGACCCTGTGCAACGGGTGGTGTTTATCGTCGAGGGATGCGTAGAGCGTAGCCAAGGGCGCCTTAGCAAAGGCTTTGTAGCCACTAGTCTGGTTAACTCCGGTGGCTTTTTTGGCGAGGGGGGCCTTAGCAAAGGCTCTGTAGCCACTAGTCTGGTTAACTCCGGTGGCTTTTTTGGCGAGGAGCTGCTCTCGTGGTGTCTCCGGCACCATCCACATTATGATAAGCTTCCAACCTCTTTGGCAACGTTTTCATGTGTGCAGCCAGTAGAAGCATACGGGCTCGACGCAGGCGATCTCAAGTACATTACCGAACACTTTCGGTACAAGTTCGCGAGCGAAAGGCTCAACCGAACAATGCGCTATTACTCATCGAATTGGCGAACATGGGGAGCTGTGGTCATCCAGCTTTCGTGGCGCTGGCACCAGATGCGAACTCGAGGTTACGCTACGCAAAAACGAAAAGGCGTCGACAGTCGACTAAGACAGTATGCTGCAGTTTTCTTGTCACTGAAGCCGAACGACCATCTTGAGTAG 1875 50.72 VLDPRCRWVQRWNRVVLLARAASLAVDPLFFYVIFLTKAGPPCFYRDAAFAAVVTAARTCVDLVHVCHVWLHFRLAYVSTASLVVGSGSLVWDARAVASHYVRSFKGFWLDLFVIIPIPQVVTWLVVRKLLREEEIKEVMRVVLVSYLFQFFPKLYHSIYLMNKLQKVTGYIFGSIWWRFSLNVFAYLIASHVAGGCWYLLATQRLISCLEQQCERRKMCKLALSCSGLNSPISGYKGVGKFVSSRGNNSTTIKSLCLEVNGPFSYGIYEPVLLVFSSNSLAVRILYPVFWGLLNLSSFGNELDPTSDLVEVIFSCCITLAGLVLFVTLIGNIQIFLQTVMASKETMQIRFREMNWWMKRRQLPVHLRERVCNFEYQRWVAMGGLDETELIGGLPDGLRRDIKRYLCLDLVRKVPFFHMLDDLILDNICDRVKPLLYAKGEKIVREGDPVQRVVFIVEGCVERSQGRLSKGFVATSLVNSGGFFGEGGLSKGSVATSLVNSGGFFGEELLSWCLRHHPHYDKLPTSLATFSCVQPVEAYGLDAGDLKYITEHFRYKFASERLNRTMRYYSSNWRTWGAVVIQLSWRWHQMRTRGYATQKRKGVDSRLRQYAAVFLSLKPNDHLE 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1918850 1922784 - MC10g0243 Mch10g0292 677385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0292 624 Gene3D Jelly Rolls 414 555 IPR014710 -
Mch10g0292 624 ProSiteProfiles cAMP/cGMP binding motif profile. 416 489 IPR000595 -
Mch10g0292 624 SMART cnmp_10 416 531 IPR000595 -
Mch10g0292 624 SUPERFAMILY Voltage-gated potassium channels 4 338 - -
Mch10g0292 624 SUPERFAMILY cAMP-binding domain-like 344 553 IPR018490 -
Mch10g0292 624 Pfam Cyclic nucleotide-binding domain 437 492 IPR000595 -
Mch10g0292 624 Gene3D Helix hairpin bin 342 407 - -
Mch10g0292 624 CDD CAP_ED 416 489 IPR000595 -
Mch10g0292 624 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 596 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0292 Mch-Chr10:1918850 Mch4g2352 Mch-Chr4:24784532 2.90E-267 dispersed
Mch10g0292 Mch-Chr10:1918850 Mch2g0345 Mch-Chr2:2559871 1.59E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0292 K05391 - rcu:8281281 793.112