Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g0339 | ATGGACTCCGTCTTCTTCGGCGCGACGGGCAACGTAGCCACCTGCTGCGTTTCCAGAGCCTTGAATCGGAAACTCTCTGAAATTGTTCGGAGAAAATGTATTCACGGCGGTGATCGAGCTCGCCGTTTCAGCTGCATTTCCAGTTACCTCGGCCTCCACGGAACTGTATGTTCTGGCTCCTGTTCTACTTCGCTCCGGACTCTACAGGTGGTGCTGCCTTCGCTGCGGCGTCGTTTGCAGTGCGTTTCGAGCTCCTCTGTGTCTTTTGCTTCTGGCGGCGGGAACGGTGGTCTTGGAGGGAAGAATGGCGGCGGAGGTCGCGGTGGAGATGGTGGACCAGGCGGTGGAGATGCGAATAAGTTTGGTTCCGGTAGTGCTGAGGAGGTTTCTTCATCATTGCCCAACGTGATTGTACTCGATGTTGGAGGAATGACTTGCGGGGGATGTGCAGCAAGTGTGAAGAGAATACTCGAAAATCAGCCACAAGTGTCATCTGCTAGTGTGAACCTCACAACAGAGACTGCAGTCATATGGCCCGTACCTGAGGTGAAAGATTCACCTCACTGGGAGAAGCAGTTGGGACAGACGCTTGCTAACCATCTAACTCAATGCGGTTTTGCATCTAGTCTTCGAGAGTCAGGAAGAGACAACATCTTCATGGTTTTTGAAAGGAAGATGGAAGAAAAGCACAATCGTTTAAAAGAGAGTGGTCGCAATCTCGTTTTCTCCTGGGCTTTGTGTGCCGTGTGTCTCCTTGGCCACATTTCTCATTTCTTTGGTGCTAAGGCCTCATGGATCCATGCATTTCATACCACTCAATTCCATCTATCATTGTGCTTATTTACATTACTTGGGCCTGGTCGTCAACTTATTCTTGATGGTATGAAAAGTCTTGTTAAAGGAGCTCCAAATATGAACACTTTAGTTGGTCTCGGAGCTTTATCATCCTTTACCGTCAGCTCATTGGCTGCCTTAATTCCGAAACTTGGTTGGAAGACTTTCTTTGAGGAACCAGTTATGTTAATAGCCTTTGTATTGTTAGGAAGGAACCTTGAACAGAGAGCTAAAATTAGAGCTGCGAGTGATATGACAGGACTTCTTAGTATTTTACCTTCAAAAGCTCGTCTAGTTGTTGATGGTGATACGCAAGAATTGGGTTCAACAGTTGAAATTCCTTGTTCCAGTCTTTCAATTGGAGATGAAATTATTGTACTTCCTGGGGACCGTGTTCCTGCTGATGGAGTTGTGAAATCTGGTAGAAGCATTGTGGATGAGTCTAGTTTCACTGGGGAGCCATTACCTGTTACCAAGTTACCTGGGAGCCAAGTTGCAGCAGGCACTATAAATCTTAATGGAACTCTTACAGTTGAGGTGCGTCGACCAGGCGGTGAGACTGCTATGGGAGATATTGTTCGTTTGGTAGAAGAGGCTCAAGGCCGGGAAGCTCCTGTTCAACAGTTAGCTGACAAGGTGTCTGGGCACTTCACTTATGGAGTAATGGCACTCTCTGCAGCAACATTTTTATTTTGGAGTCAATTTGGCTCACGAATTCTGCCTGCAGCTTTTTATCATGGAAGTTCAGTTTCATTGGCTCTGCAGCTTTCTTGCAGTGTTCTGGTTATTGCTTGTCCATGTGCACTTGGCTTAGCTACACCAACTGCAATGCTGGTTGGAACTTCATTAGGTGCGACTAAAGGATTACTTTTGCGTGGGGGAAATATCTTAGAGAAGTTCGCAATGGTGGATACTGTTGTCTTTGATAAAACCGGGACCTTGACGGTTGGGAAACCCATTGTGACAAAGGTGTTGGCAACTCCAAGATATGAGACAAATGTAGATTCGCAGATAAACTCACACGGCATTCATTCAGAAAATGAGATTCTCAAGTTTGCTGCTGCAGTGGAATCTAACACAGTTCACCCAGTTGGCAAGGCAATTGTGGAAGCTGCTCGAGCTGTTAATGGTCAGAATTTGAAGGTGGTTGAAGGAACGTTTATGGAAGAACCTGGTTCTGGCGCTGTTGCAGCTGTAGAAAACAAGATAATATCTGTTGGAACATTGGACTGGATTCAGAGGCATGGAGTTGTTGTCAATAATTTCCGAGAGATGGATGATCTCAAGGCTCAATCGGTAGTTTATGTTGGAATAGACAATATTCTTGCTGGTCTTATTTATTATGAGGATGGCATCAGGGAAGATGCTAGTCATGTTGTTGACACTTTATCTAGGCAAGGAATTAACACTTATATGTTGTCTGGGGACAAAAGGAGTAATGCTGAGTACGTTGCATCTCTTGTTGGAATTCCAAAAGAGAAGGTGCAATCTGGAGTTAAACCCCATGAAAAGAAGAAGTTTATTAGTGAACTTCAGGAGAATCGCAACATTGTAGCCATGGTTGGTGATGGAATCAACGATGCTGCTGCTTTGGCTACTGCAGATATTGGAATTGCAATGGGTGGGGGTGTTGGAGCTGCTAGTGAGGTGTCTCCTATTGTGTTAATGGGCAACAGACTCTCTCAGTTGCTTGATGCTTTGGAGCTTAGCAAGTTGACCATGAAGACCGTGAAGCAAAACCTTTGGTGGGCTTTTGGGTACAACATTGTTGGAATTCCAATTGCTGCAGGCGTCTTGCTTCCTATAACAGGGACTATACTCACTCCATCCATTGCGGGTGCCCTAATGGGTCTGAGTTCTATAGGAGTTATGGCGAACTCACTTCTTTTGAGATTAAGGTTTTCTCAGAACAGAAAAAAATCTCTAGAAGACCAGCAAAAGGAAAGGTAA | 2784 | 45.44 | MDSVFFGATGNVATCCVSRALNRKLSEIVRRKCIHGGDRARRFSCISSYLGLHGTVCSGSCSTSLRTLQVVLPSLRRRLQCVSSSSVSFASGGGNGGLGGKNGGGGRGGDGGPGGGDANKFGSGSAEEVSSSLPNVIVLDVGGMTCGGCAASVKRILENQPQVSSASVNLTTETAVIWPVPEVKDSPHWEKQLGQTLANHLTQCGFASSLRESGRDNIFMVFERKMEEKHNRLKESGRNLVFSWALCAVCLLGHISHFFGAKASWIHAFHTTQFHLSLCLFTLLGPGRQLILDGMKSLVKGAPNMNTLVGLGALSSFTVSSLAALIPKLGWKTFFEEPVMLIAFVLLGRNLEQRAKIRAASDMTGLLSILPSKARLVVDGDTQELGSTVEIPCSSLSIGDEIIVLPGDRVPADGVVKSGRSIVDESSFTGEPLPVTKLPGSQVAAGTINLNGTLTVEVRRPGGETAMGDIVRLVEEAQGREAPVQQLADKVSGHFTYGVMALSAATFLFWSQFGSRILPAAFYHGSSVSLALQLSCSVLVIACPCALGLATPTAMLVGTSLGATKGLLLRGGNILEKFAMVDTVVFDKTGTLTVGKPIVTKVLATPRYETNVDSQINSHGIHSENEILKFAAAVESNTVHPVGKAIVEAARAVNGQNLKVVEGTFMEEPGSGAVAAVENKIISVGTLDWIQRHGVVVNNFREMDDLKAQSVVYVGIDNILAGLIYYEDGIREDASHVVDTLSRQGINTYMLSGDKRSNAEYVASLVGIPKEKVQSGVKPHEKKKFISELQENRNIVAMVGDGINDAAALATADIGIAMGGGVGAASEVSPIVLMGNRLSQLLDALELSKLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPITGTILTPSIAGALMGLSSIGVMANSLLLRLRFSQNRKKSLEDQQKER | 927 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2250213 | 2268590 | - | MC10g0277 | Mch10g0339 | 677432 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g0339 | 927 | ProSitePatterns | Heavy-metal-associated domain. | 141 | 170 | IPR017969 | GO:0046872(InterPro) | |
Mch10g0339 | 927 | Pfam | E1-E2 ATPase | 370 | 564 | - | - | |
Mch10g0339 | 927 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 339 | 579 | IPR023298 | - | |
Mch10g0339 | 927 | SUPERFAMILY | HAD-like | 583 | 905 | IPR036412 | - | |
Mch10g0339 | 927 | NCBIfam | HAD-IC family P-type ATPase | 387 | 609 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch10g0339 | 927 | NCBIfam | HAD-IC family P-type ATPase | 633 | 889 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch10g0339 | 927 | SFLD | p-type atpase | 568 | 849 | IPR044492 | - | |
Mch10g0339 | 927 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 587 | 593 | IPR018303 | - | |
Mch10g0339 | 927 | FunFam | Copper-transporting ATPase PAA1 chloroplastic | 596 | 730 | - | - | |
Mch10g0339 | 927 | FunFam | Copper-transporting ATPase 1, putative | 356 | 478 | - | - | |
Mch10g0339 | 927 | CDD | HMA | 138 | 183 | IPR006121 | GO:0046872(InterPro) | |
Mch10g0339 | 927 | Gene3D | - | 136 | 209 | - | - | |
Mch10g0339 | 927 | MobiDBLite | consensus disorder prediction | 96 | 127 | - | - | |
Mch10g0339 | 927 | NCBIfam | copper-translocating P-type ATPase | 287 | 909 | - | - | |
Mch10g0339 | 927 | CDD | P-type_ATPase_Cu-like | 238 | 909 | - | - | |
Mch10g0339 | 927 | FunFam | Copper-transporting ATPase PAA1, chloroplastic | 135 | 210 | - | - | |
Mch10g0339 | 927 | Gene3D | - | 596 | 730 | IPR023299 | GO:0000166(InterPro) | |
Mch10g0339 | 927 | PANTHER | ATP7, ISOFORM B | 223 | 910 | - | GO:0005507(PANTHER)|GO:0016020(PANTHER)|GO:0043682(PANTHER)|GO:0055070(PANTHER) | |
Mch10g0339 | 927 | Pfam | haloacid dehalogenase-like hydrolase | 581 | 813 | - | - | |
Mch10g0339 | 927 | Coils | Coil | 903 | 923 | - | - | |
Mch10g0339 | 927 | Gene3D | - | 576 | 849 | IPR023214 | - | |
Mch10g0339 | 927 | PRINTS | P-type cation-transporting ATPase superfamily signature | 424 | 438 | - | - | |
Mch10g0339 | 927 | PRINTS | P-type cation-transporting ATPase superfamily signature | 822 | 834 | - | - | |
Mch10g0339 | 927 | PRINTS | P-type cation-transporting ATPase superfamily signature | 585 | 599 | - | - | |
Mch10g0339 | 927 | PRINTS | P-type cation-transporting ATPase superfamily signature | 799 | 818 | - | - | |
Mch10g0339 | 927 | PRINTS | P-type cation-transporting ATPase superfamily signature | 744 | 754 | - | - | |
Mch10g0339 | 927 | Gene3D | - | 356 | 478 | - | - | |
Mch10g0339 | 927 | SUPERFAMILY | Calcium ATPase, transduction domain A | 386 | 474 | IPR008250 | - | |
Mch10g0339 | 927 | Pfam | Heavy-metal-associated domain | 138 | 183 | IPR006121 | GO:0046872(InterPro) | |
Mch10g0339 | 927 | SFLD | C1.7: P-type atpase like | 568 | 849 | - | - | |
Mch10g0339 | 927 | SUPERFAMILY | HMA, heavy metal-associated domain | 136 | 185 | IPR036163 | GO:0046872(InterPro) | |
Mch10g0339 | 927 | ProSiteProfiles | Heavy-metal-associated domain profile. | 135 | 209 | IPR006121 | GO:0046872(InterPro) | |
Mch10g0339 | 927 | NCBIfam | heavy metal translocating P-type ATPase | 305 | 908 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
Mch10g0339 | 927 | ProSitePatterns | Hypothetical cof family signature 2. | 799 | 821 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0339 | Mch-Chr10:2250213 | Mch11g0455 | Mch-Chr11:2842141 | 6.50E-197 | dispersed | |
Mch9g0154 | Mch-Chr9:1193848 | Mch10g0339 | Mch-Chr10:2250213 | 5.36E-06 | dispersed | |
Mch10g0339 | Mch-Chr10:2250213 | Mch2g1310 | Mch-Chr2:9270897 | 1.66E-107 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g0339 | K17686 | - | csv:101214702 | 1550.41 |