Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g0473 | ATGGGGAGTGTCGAAGGAGACAGAACAGTAACGGGATTTGCCGCAAAAGACCCATCTGGGATTCTCTCCCCTTACACTTACACTCTCAGAGCCACCGGTCCGGAAGATGTTTTCATCAAAGTGATCTGCTGCGGAGTCTGCCACTCCGATCTTCACCAGATCAAAAACGACCTCGGAATGTCCAATTACCCCATGGTTCCTGGCCACGAAGTCGTCGGAGAAGTTGTGGAAGTCGGATCGGAAGTCGATCGGTTCAGAGTTGGGGAACTGGTCGGAGTTGGGTGCATCGTCGGATCCTGCTCCAAGTGCAGCCCCTGCAATTCCGACAAGGAGCAGTACTGTAACAAGAGGATCTGGAGCTACAACGACGTCTACCACGACGGCTGCCCCACCCAAGGCGGCTTCTCCTCCGCCATGGTCGTCGACCAGAAGTTTGTGGTGAGGATCCCGGAAGGGATGTCGCCGGAGCAGGCGGCGCCGCTGCTGTGCGCGGGAGTGACGGTGTACAGTCCGCTGAGCCATTTTGGGCTGAAACAGAGCGGGCTGCGCGGGGGGATTCTGGGGCTCGGCGGCGTCGGCCACATGGGGGTGAAAGTGGCGAAGGCGCTGGGCCACCACGTGACGGTCATAAGCTCGTCGGAGAAGAAGAGGGAGGAGGCGCTGGAGCATCTCGGCGCCGACGAGTACCTGGTAAGCTCCGACGCGGAGGAGATGCAACGCGCCGCCGACTCGCTGGATTACATCATCGACACAGTGCCGGTTTTTCATCCCCTCGAGCCGTATCTCTCGCTTCTGAAACTCGACGGCAAATTGATCTTGATGGGTGTCATAAACACTCCATTGAAATTCGTTTCCCCTCTCCTCATGCTCGGGAGGAAGACGATTACAGGGAGCTTCATCGGGAGCATGAAAGAGACGCAAGAAGTTCTGGATTTCTTCAAGGAAAAAGAGCTGAGCTCCATGATTGAAGTGATAAAGCTGGAGTACATAAACAAGGCGTTGGAGAGGCTGGAGAAGAACGATGTCAGATACAGGTTCGTCGTCGACGTCGCCGGAAGCAAGGTTCCTCAG | 1071 | 56.4 | MGSVEGDRTVTGFAAKDPSGILSPYTYTLRATGPEDVFIKVICCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSEVDRFRVGELVGVGCIVGSCSKCSPCNSDKEQYCNKRIWSYNDVYHDGCPTQGGFSSAMVVDQKFVVRIPEGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKREEALEHLGADEYLVSSDAEEMQRAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLKFVSPLLMLGRKTITGSFIGSMKETQEVLDFFKEKELSSMIEVIKLEYINKALERLEKNDVRYRFVVDVAGSKVPQ | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3081271 | 3082670 | + | MC10g0388 | Mch10g0473 | 677566 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g0473 | 357 | SMART | PKS_ER_names_mod | 20 | 348 | IPR020843 | GO:0016491(InterPro) | |
Mch10g0473 | 357 | PANTHER | ALDEHYDE REDUCTASE | 9 | 352 | IPR047109 | GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER) | |
Mch10g0473 | 357 | SUPERFAMILY | GroES-like | 17 | 181 | IPR011032 | - | |
Mch10g0473 | 357 | Gene3D | - | 164 | 320 | - | - | |
Mch10g0473 | 357 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 68 | 82 | IPR002328 | GO:0008270(InterPro)|GO:0016491(InterPro) | |
Mch10g0473 | 357 | FunFam | probable cinnamyl alcohol dehydrogenase | 13 | 170 | - | - | |
Mch10g0473 | 357 | CDD | CAD1 | 11 | 349 | IPR047109 | GO:0016616(InterPro) | |
Mch10g0473 | 357 | Gene3D | - | 13 | 350 | - | - | |
Mch10g0473 | 357 | Pfam | Zinc-binding dehydrogenase | 191 | 314 | IPR013149 | - | |
Mch10g0473 | 357 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 153 | 318 | IPR036291 | - | |
Mch10g0473 | 357 | FunFam | Putative cinnamyl alcohol dehydrogenase 6 | 321 | 350 | - | - | |
Mch10g0473 | 357 | FunFam | Cinnamyl alcohol dehydrogenase | 164 | 320 | - | - | |
Mch10g0473 | 357 | Pfam | Alcohol dehydrogenase GroES-like domain | 33 | 151 | IPR013154 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0473 | Mch-Chr10:3081271 | Mch8g0892 | Mch-Chr8:6402498 | 7.97E-16 | dispersed | |
Mch11g0098 | Mch-Chr11:637420 | Mch10g0473 | Mch-Chr10:3081271 | 2.06E-119 | transposed | |
Mch1g1362 | Mch-Chr1:15570869 | Mch10g0473 | Mch-Chr10:3081271 | 6.53E-125 | transposed | |
Mch2g1704 | Mch-Chr2:15623953 | Mch10g0473 | Mch-Chr10:3081271 | 5.63E-134 | transposed | |
Mch6g2385 | Mch-Chr6:25729871 | Mch10g0473 | Mch-Chr10:3081271 | 3.10E-102 | transposed | |
Mch10g0473 | Mch-Chr10:3081271 | Mch4g0736 | Mch-Chr4:4997541 | 5.88E-216 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g0473 | K00083 | - | csv:101222395 | 622.468 |