Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0477 ATGAGCTTCAAAATCACAAATCTGCCCTTCTTTTTTCCTCCTCTTCTTCTTCTTCTTCTTCTTCCCTCTCTGGCCCTGGCCCTCAACGGCGATGGCCTCCTCTTGATTTCTCTCAAACGCTCCATTCTCGGCGATCCCTTGTCTGTTTTCGCCAATTGGAACTTCAACGACGCCACCCCTTGTTCCTGGCGTGGAGTCACCTGCACTGATCTCGGAAGCTACGGCGGCGGCTGGCCGGATGTTCTCAGAGTCACCGCCGTCGCCCTCCCCGGCAGCCAGCTTCTGGGTTCCATTCCTGATGAGATTGGAAGGATCGAGCACCTTCGTCTTCTCGATCTTTCGAGTAATTTCTTTAATGGGTCTCTGCCATTTTCCATTTTCAATGCTTCCGAGCTTCAGATTCTTTCCCTTGCCAACAATGTCATCTCCGGCGAGTTGCCGGAGTCTATTGGGGGTTTGAGGAGTCTTCAGGTTTTGAATCTGTCTGATAATGCGTTGGCCGGAAATGTGCCCGGAAATCTCACTACTCTGCGGAATCTTACTGTCGTTTCTCTGAGAAGTAATTACTTCACCGGAGATGTTCCGAGGAATTTCAGTTCGGTTGAGGTTTTGGATCTGTCTTCTAATTTGTTTAATGGGTCTCTGCCAGCGAGTTTTGGTGGGGAGAAATTGCGGTATTTGAACTTCTCTTACAATAAAATTTCGAGCCCCATTCCGCCGGAGTTCGCCAAGAGGATTCCGGCGAATGCGACGATGGATCTCTCTTTCAACAATCTCACTGGGCCGATTCCTCAGTCACTTGCTCTGCTTAGCCAGAAAACAGAGGCGTTCGCCGGAAACGAAGATCTCTGCGGGAAGCCACTGAAGCACCTCTGTTCAATTCCTTCTTCACTCACTACTCCACCCAATGTTTCCGATACTTCATCTTCTTCTCCGGCAATCGCCGCCATACCCAAAACAATCGGCTCTGTTCCGGCCACACAAACGACCGGAGGTCCAAACGGGACACAAGCTTCTCAGCCGCAGAACAGCATGAAACCCATCACAATCGCCGCCATCGCCATCGGAGATATCGCCGGAATCGCGATTCTCGCCGTCGTGATTCTCTACGTATACCATCACCGGAAACAAAAAACCCCCGATTCCAAAACCCTAAAGTCCAAACCCGCCGAGAAGAACCCGCCGATGGGCTCAGAACAAAACCCCCACAATCAGAAGAAACCCTCGTCGGTTTTGTTCTGTTTGGCTAACAAAGGCGAAGAGACCTCGGAGGCGACGAGTTCTTCCGACGGCGAAGAGAACAGAGAGAAATCCGGCGAGGAAAAAACAGAGAGTAAGAAAAACGGCGTGCTCGTAACGGTGGACGCCGAAACGGAGCTCGAATTGGAGACTCTGTTGAAGGCGTCGGCGTATATACTCGGGGCGAGCGGCGGGAGCATAGTGTACAAGGCGGTGCTGGAGGACGGCACGGCGTTCGCCGTCAGAAGGATCGGCGACGGCGGCGGCGCTGAGAGAATGAGGGATTTCGAAAGCCAAGTGAGAGCCATTGCTAAGATTCAACATCAGAACTTAGTGAAAATTCGAGGGTTCTTCTGGGGAGACGACGAGAAGCTCATCATCTACGACTACGCCTCCAATGGCTGCCTCGCCGGCGCCATTCACAGAAAACCGAGTTTGTCGTCTTCTTCCCAGAGCCACCTTCCATTGGAGGCCCGACTGAAGATCTTGAGAGGAATCGCTCGCGGGCTGGCCTTCGTCCACGACAAGAAGCACGTCCATGGCAACCTCAAGCCCTCCAACATCCTCTTCAACTCCGATATGGAGCCATTGATCAGCGATCTCGGCCTCGACCGGCTCGTCTCCGGCACCTCCAGCGCCAAAATCGCCCTCGCCTCCGGTTCGGCCAGGAACTTCGGGAGCCACAGGTCCACGCCGACTCGCGAGCACCAAGACGGCGGCGGCGGCGGAAGCCCGGCGGTGAACCTGGCGTCGGGGTACCAGGCGCCGGAATCTCTGAAGAGTCTGAAACCGAGCCCTAAATGGGACGTGTACTCGTTCGGGGTGATGGTGCTGGAGGTGATGAGCGGACGAACGGTGACGGAGAGGGAGGTGAATAATCAATGGAGCGGCGTGGGATTGGGGGCGGAAGATGAGGGGCGGATGAAGAAGATGACGGATCCAGCGATCAGGGGGGAAGTGGAAGGGAAAGAGGAGGCGATGATGGGGATTTTTAGATTAGGGTTTAACTGCGTTTGTTTTGTGCCGCAAAAGAGACCCACCATGAAAGAAGCAGTGCAGGTGCTTGAGAAAATGTCTGCAACCATTTCTTCTCGCTAA 2337 53.87 MSFKITNLPFFFPPLLLLLLLPSLALALNGDGLLLISLKRSILGDPLSVFANWNFNDATPCSWRGVTCTDLGSYGGGWPDVLRVTAVALPGSQLLGSIPDEIGRIEHLRLLDLSSNFFNGSLPFSIFNASELQILSLANNVISGELPESIGGLRSLQVLNLSDNALAGNVPGNLTTLRNLTVVSLRSNYFTGDVPRNFSSVEVLDLSSNLFNGSLPASFGGEKLRYLNFSYNKISSPIPPEFAKRIPANATMDLSFNNLTGPIPQSLALLSQKTEAFAGNEDLCGKPLKHLCSIPSSLTTPPNVSDTSSSSPAIAAIPKTIGSVPATQTTGGPNGTQASQPQNSMKPITIAAIAIGDIAGIAILAVVILYVYHHRKQKTPDSKTLKSKPAEKNPPMGSEQNPHNQKKPSSVLFCLANKGEETSEATSSSDGEENREKSGEEKTESKKNGVLVTVDAETELELETLLKASAYILGASGGSIVYKAVLEDGTAFAVRRIGDGGGAERMRDFESQVRAIAKIQHQNLVKIRGFFWGDDEKLIIYDYASNGCLAGAIHRKPSLSSSSQSHLPLEARLKILRGIARGLAFVHDKKHVHGNLKPSNILFNSDMEPLISDLGLDRLVSGTSSAKIALASGSARNFGSHRSTPTREHQDGGGGGSPAVNLASGYQAPESLKSLKPSPKWDVYSFGVMVLEVMSGRTVTEREVNNQWSGVGLGAEDEGRMKKMTDPAIRGEVEGKEEAMMGIFRLGFNCVCFVPQKRPTMKEAVQVLEKMSATISSR 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3101135 3105256 + MC10g_new0086 Mch10g0477 677570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0477 778 MobiDBLite consensus disorder prediction 378 407 - -
Mch10g0477 778 Pfam Protein kinase domain 473 766 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0477 778 ProSiteProfiles Protein kinase domain profile. 467 775 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0477 778 SUPERFAMILY L domain-like 35 290 - -
Mch10g0477 778 SUPERFAMILY Protein kinase-like (PK-like) 472 769 IPR011009 -
Mch10g0477 778 Pfam Leucine Rich Repeat 201 220 IPR001611 GO:0005515(InterPro)
Mch10g0477 778 Pfam Leucine Rich Repeat 223 243 IPR001611 GO:0005515(InterPro)
Mch10g0477 778 MobiDBLite consensus disorder prediction 419 450 - -
Mch10g0477 778 PANTHER OS05G0588300 PROTEIN 177 773 IPR050994 -
Mch10g0477 778 MobiDBLite consensus disorder prediction 635 663 - -
Mch10g0477 778 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Mch10g0477 778 Gene3D Ribonuclease Inhibitor 29 199 IPR032675 -
Mch10g0477 778 Gene3D Ribonuclease Inhibitor 200 294 IPR032675 -
Mch10g0477 778 MobiDBLite consensus disorder prediction 428 448 - -
Mch10g0477 778 Gene3D Phosphorylase Kinase; domain 1 431 543 - -
Mch10g0477 778 Gene3D Transferase(Phosphotransferase) domain 1 545 777 - -
Mch10g0477 778 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 28 193 - -
Mch10g0477 778 MobiDBLite consensus disorder prediction 323 342 - -
Mch10g0477 778 Pfam Leucine rich repeat 107 166 IPR001611 GO:0005515(InterPro)
Mch10g0477 778 FunFam Leucine-rich repeat receptor-like protein kinase 200 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0477 Mch-Chr10:3101135 Mch2g1270 Mch-Chr2:8825039 9.04E-157 dispersed
Mch10g0477 Mch-Chr10:3101135 Mch9g1932 Mch-Chr9:20819970 3.11E-81 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77000 PF00069 Pkinase 4.30E-28 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0477 - - - 0.0