Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0481 ATGGCGATGCATCGATATGAACAATCCGACGATGAAGGCCAAACCCATTTGTTTCTCCTCGATTCTCTGTTCTGTGAGGAGGAGAAATGGGAGGAGGAAGAGGAGGAAGTAGAGGTGGAAGAAACCCATCTTTTTCCTTTGGGGGTTTTTGAGGAAGATCTCTTCTGGGAAGATGAACAGCTTCTTTCTTTGTTGTCTAAGGAAACAGAACAGCAGAAACAGAGCCATCTCAAGCTCGAAGCTCTGTTCACGGATCCTTCTCTCTCTGCTGCTCGTTCTTCGGCTGTGGGGTGGATGCTGAAAGTTAATTCCCATTATGGATTCTCTACTCTTACTGCAATTTTGGCCGTGGGTTATCTCGACAGGTTCCTTTTGAGCCTCCATTTTAGGAGTGACAAGCCGTGGATGACCCAGCTTGTGGCTGTTACTTGTCTCTCGTTGGCGGCTAAAGTGGAGGAGATTCAAGTTCCTCTTCTGCTTGACCTTCAAGTGGAGGATGCGAAATATGTGTTTGAGGCCAAAACCATTCAAAGAATGGAGCTTCTGGTCCTCTCAACTCTTCAATGGAGGATGCATTTGGTGACTCCTTATTCATTTCTTGATCACATTGCGAGGAGGCTTGGATTCAAGACCAATCTTCACTTAGAGTTTTTCAGGCGTTCTGAACACCTTCTCCTCTCTCTACTCTCAGATTCAAGATTTGTTGGCTATCTTCCATCTGTCTTGGCAACTGCCACAATGATGGAAGTGATAGATCAGATTGAACCCTATAAATCACTGGAGCACCAAGATCAGCTTCTGAGCGTCCTCAAAATGAGCAAGGAAAAAGTGCAAGTCTGTTACAATCTTGTGGTGGAGCATTCAAAGGCCTATGGCAATGGCTTTTATCATTCCAACAACCCCCACAAGCGCAAGCATGAACAGCAAGCTCCTGATAGCCCAAGTGGTGTGATAGATGCAGGTTTCAGCTCAGATAGCTCCAATGATTCTTGGGCATTGAGAGCAGCATCAGTTTGTTCATCACCTGAGCCTTCTTTCAAGAAGAGCAAAACTGAAGAGCCAAAGATGAAATTCCATTCTCTTAACAGGGTCTTTTTGGACATTGTTGGCAGCCCCTCT 1119 45.58 MAMHRYEQSDDEGQTHLFLLDSLFCEEEKWEEEEEEVEVEETHLFPLGVFEEDLFWEDEQLLSLLSKETEQQKQSHLKLEALFTDPSLSAARSSAVGWMLKVNSHYGFSTLTAILAVGYLDRFLLSLHFRSDKPWMTQLVAVTCLSLAAKVEEIQVPLLLDLQVEDAKYVFEAKTIQRMELLVLSTLQWRMHLVTPYSFLDHIARRLGFKTNLHLEFFRRSEHLLLSLLSDSRFVGYLPSVLATATMMEVIDQIEPYKSLEHQDQLLSVLKMSKEKVQVCYNLVVEHSKAYGNGFYHSNNPHKRKHEQQAPDSPSGVIDAGFSSDSSNDSWALRAASVCSSPEPSFKKSKTEEPKMKFHSLNRVFLDIVGSPS 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3122085 3123523 - MC10g0394 Mch10g0481 677574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0481 373 Gene3D - 86 192 - -
Mch10g0481 373 Gene3D - 193 282 - -
Mch10g0481 373 PANTHER CYCLINS 59 286 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Mch10g0481 373 SMART Cyclin_C_2 194 329 IPR004367 -
Mch10g0481 373 FunFam D3-type cyclin 85 192 - -
Mch10g0481 373 CDD CYCLIN_AtCycD-like_rpt2 194 284 - -
Mch10g0481 373 CDD CYCLIN_AtCycD-like_rpt1 91 189 - -
Mch10g0481 373 ProSitePatterns Cyclins signature. 92 123 IPR048258 -
Mch10g0481 373 MobiDBLite consensus disorder prediction 295 328 - -
Mch10g0481 373 Pfam Cyclin, N-terminal domain 76 191 IPR006671 -
Mch10g0481 373 SMART cyclin_7 198 286 IPR013763 -
Mch10g0481 373 SMART cyclin_7 97 185 IPR013763 -
Mch10g0481 373 SUPERFAMILY Cyclin-like 55 192 IPR036915 -
Mch10g0481 373 Coils Coil 20 40 - -
Mch10g0481 373 Pfam Cyclin, C-terminal domain 194 294 IPR004367 -
Mch10g0481 373 FunFam CYCLIN D32 193 282 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0481 Mch-Chr10:3122085 Mch8g0255 Mch-Chr8:1702853 8.03E-45 dispersed
Mch1g1237 Mch-Chr1:14685965 Mch10g0481 Mch-Chr10:3122085 4.86E-96 wgd
Mch10g0481 Mch-Chr10:3122085 Mch11g0329 Mch-Chr11:2026838 5.26E-89 wgd
Mch10g0481 Mch-Chr10:3122085 Mch4g0724 Mch-Chr4:4900652 2.56E-88 wgd
Mch10g0481 Mch-Chr10:3122085 Mch8g0665 Mch-Chr8:4726293 4.76E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0481 K14505 - csv:101221213 600.127