Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch10g0488 | GAGCAACAAAACCAGGCAGGAAGGCACCAAGAAGTTGGCCATAAGAGTCTTTTGCAAAGTGATGCTCTTTACCAGTACATTTTAGAGACAAGTGTGTACCCAAGAGAGCCAGAAGCCATGAAGGAACTTAGAGACTTGACAGCCAAACATCCATGGAATATAATGACAACATCAGCAGATGAAGGGCAGTTCTTGAACATGCTCTTGAAGCTGATCAACGCCAAGAACACGATGGAGATCGGCGTATACACCGGCTACTCCCTCCTTGCCACCGCTCTCGCCCTTCCCGACGACGGAAAGATACTGGCGATGGATATTAACAGAGAAAACTATGAACTTGGGCTTCCGGTGATCCAGAAGGCCGGCGTGGCCCATAAGATTGAATTCAAAGAAGGCCCAGCCCTCCCCATTCTCGACCAACTCGTCGCTGACGAGAGTAACTGTGGGACGTACGACTTCATCTTCGTGGACGCTGATAAGGACAACTACATCAACTACCACAAGAGGCTGATTGATTTGGTCAAAGTTGGGGGAGTGATCGGCTACGACAACACCCTATGGAACGGCTCCGTCGTGGCAGCACCTGATTCGCCGATGCGTAAGTACGTACGCTACTATAGGGACTTTGTGCTGGAGCTCAACAAGGCTCTCGCTTTGGACCCTAGGATCGAGATCTGTATGCTTCCGGTTGGTGATGGGATCACTCTGTGCCGTCGGATCAAC | 723 | 50.62 | EQQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPEAMKELRDLTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIEFKEGPALPILDQLVADESNCGTYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAAPDSPMRKYVRYYRDFVLELNKALALDPRIEICMLPVGDGITLCRRIN | 241 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 3168606 | 3169960 | - | MC10g0397 | Mch10g0488 | 677581 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch10g0488 | 241 | PANTHER | O-METHYLTRANSFERASE-RELATED | 13 | 240 | IPR050362 | GO:0008757(PANTHER) | |
| Mch10g0488 | 241 | Pfam | O-methyltransferase | 29 | 240 | IPR002935 | GO:0008171(InterPro) | |
| Mch10g0488 | 241 | FunFam | Caffeoyl-CoA O-methyltransferase 1 | 9 | 241 | - | - | |
| Mch10g0488 | 241 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 20 | 239 | IPR029063 | - | |
| Mch10g0488 | 241 | Gene3D | Vaccinia Virus protein VP39 | 6 | 241 | IPR029063 | - | |
| Mch10g0488 | 241 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 16 | 240 | IPR002935 | GO:0008171(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g0488 | Mch-Chr10:3168606 | Mch4g0692 | Mch-Chr4:4641050 | 1.70E-164 | dispersed | |
| Mch1g1222 | Mch-Chr1:14558218 | Mch10g0488 | Mch-Chr10:3168606 | 2.58E-115 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch10g0488 | K00588 | - | csv:101205648 | 461.07 |