Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0552 ATGATTGGAGGAGGACTGCAAGAGGGAAGGTCACTGGCCGAGACGCCCACCTACTCAGTTGCTTCCGTGGTTACGGTCATGGTCTTCGTCTGCTTTGTGGTGGAGCGGGCAATCTATAGATTTGGAAAGTGGTTGAAGAAGACGAAGAGAAAGGCTCTGTTTGCTTCTTTGGAGAAGATCAAGGAAGAGCTGATGCTGCTTGGACTAATATCTTTGATGCTGGCACAATGTGCAAGGTGGATCTCTGAAATTTGTGTGAACTCGTCCCTCTTCACCAGCAGATTCTACATTTGTTCAGAAGAAGATTATGGCACCAATGAACACGTTATGCTTGAAAGTTCTTTTCTATCTCCTAATGAAACTGGCAGTCCTACAAGAGGATCAAGTGCTCTTCTGCATCAATGTGGTGAGGGTCGTGAACCTTTTGTTTCATACGAGGGACTCGAACAGCTTCATCGCTTCTTATTCGTTCTTGGGATCACTCATGTTCTTTATAGTTGTCTTGCAGTCGGTCTGGCAATGAGTAAGATTTACAGTTGGAGGAAATGGGAAAATCAAGTTAGATTAGCTGCTGATGAAAATTTGCCAGCTAGGAAAAATAAGGTGATGAGGCGGCAAACGACATTCGTATTCCACCACACATCTCATCCATGGAGCAGGAGTCGTGTCCTCATTTGGATGCTTTGTTTTCTACGTCAGTTCAAGAGTTCGATAAAGAAGTCGGACTACTTGGCCCTCCGTTTGGGATTCATTACGAAGCACAAACTACCAATTTCTTATGACTTCCACAAGTATATGGTTCGGAGCATGGAAGACGAGCTCCATGGAATCCTTGGAATTAGCTGCCCACTATGGGGCTACGCCATTCTTTGCATCTTTGTCAACATTCACGGTCTAAATATCTACTTTTGGCTTTCTTTCATACCGGCCGCTCTTGTTATGCTGGTTGGGACAAAACTTCAACATGTAGTCTCCTCTTTGGCTCTTGAAATAGTGGAACAAACAGGTCCAGCAATTGGGACTCAAATAAAACCAAGAGATGATCTGTTTTGGTTTGGAAAGCCTGAGATATTACTGCGGTTAATACAGTTCATCATATTTCAGAATGCATTTGAGATGGCAACGTTTATCTGGTCTTTGTGGGGATTTGAGGAGAGATCTTGCTTCATGAAGAACAGCTTTATGATAATCATGAGATTGACGTCCGGTGTTCTTGTTCAGTTTTGGTGCAGCTACAGCACAGTGCCACTGAATGTAATTGTTACACAGATGGGATCCAAGTGTAAGAAAGCATTGGTGGCTGAGAGTGTGAGAGAGTCACTGCATAGTTGGTGCAAGAGAGTAAAGCAGAGGTCCAAGCGTGACTCTGCACAGTCTGTCACTACAAGATCGGTATGCTCGCTGGAATCAATGGTCGATGAGCGCGATGAAATAACTGTTGCGTCGGGTACGTTGTCACGGAGCTCATCATTCGACGATTTGAATCAGGTAACGATACAATCTTGCGGACAACTGGAGGCCATTATTGAATCTTCAAGCTTCCAGAAGCATGAACTTCCCCCCAATATGGCGAGATATCTATCAGAAGTTGCAAGTGTTTCTCATGCTTCTGCTAACGACCAAGAAAATAATGCAGAAAGTGGAGAAGATAGCAAGGTCGAGTCTCTTTTCGACTTGTTCCAAAGGACA 1689 44.23 MIGGGLQEGRSLAETPTYSVASVVTVMVFVCFVVERAIYRFGKWLKKTKRKALFASLEKIKEELMLLGLISLMLAQCARWISEICVNSSLFTSRFYICSEEDYGTNEHVMLESSFLSPNETGSPTRGSSALLHQCGEGREPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKIYSWRKWENQVRLAADENLPARKNKVMRRQTTFVFHHTSHPWSRSRVLIWMLCFLRQFKSSIKKSDYLALRLGFITKHKLPISYDFHKYMVRSMEDELHGILGISCPLWGYAILCIFVNIHGLNIYFWLSFIPAALVMLVGTKLQHVVSSLALEIVEQTGPAIGTQIKPRDDLFWFGKPEILLRLIQFIIFQNAFEMATFIWSLWGFEERSCFMKNSFMIIMRLTSGVLVQFWCSYSTVPLNVIVTQMGSKCKKALVAESVRESLHSWCKRVKQRSKRDSAQSVTTRSVCSLESMVDERDEITVASGTLSRSSSFDDLNQVTIQSCGQLEAIIESSSFQKHELPPNMARYLSEVASVSHASANDQENNAESGEDSKVESLFDLFQRT 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3636304 3642284 - MC10g0449 Mch10g0552 677645

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0552 563 PANTHER MLO-LIKE PROTEIN 1 3 501 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Mch10g0552 563 MobiDBLite consensus disorder prediction 533 563 - -
Mch10g0552 563 Pfam Mlo family 9 467 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0552 K08472 - - csv:101204236 959.518
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0552 Mch-Chr10:3636304 Mch10g1764 Mch-Chr10:17471798 7.75E-173 dispersed
Mch10g0552 Mch-Chr10:3636304 Mch2g0365 Mch-Chr2:2709877 1.40E-106 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi12g1097 . . . . . . . . . . . . . . Sed04g1597 Cpe01g00825 Cpe14g00681 Bhi01g01590 Tan01g0784 Cmetu04g0308 . Hepe07g0512 Mch10g0552 . Cla05g01024 Cam05g1118 Cec05g1128 Cco05g1118 Clacu05g1109 Cmu05g1058 Cre05g1133 . . . . . . . Cme06g01218 . . . . . . . . . Cmo04g00973 . . . . . . . . . . . . . . . . . . . . . Lsi05g00163 . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Mch11g1081 . 9 555 MLO family AT5G53760 70.1 1.1e-214 743.0
Mch4g2243 . 9 547 MLO family AT5G53760 67.4 8.0e-210 726.9
Mch3g0494 . 10 473 MLO family AT3G45290 53.9 1.5e-135 479.9
Mch11g1081 . 1 555 MLO family AT1G26700 66.4 1.4e-206 716.1
Mch4g2243 . 9 547 MLO family AT1G26700 67.0 3.1e-203 704.9
Mch9g1770 . 4 495 MLO family AT2G39200 67.2 4.3e-195 677.9
Mch2g0365 . 8 503 MLO family AT2G39200 68.1 3.1e-193 671.8
Mch3g0487 . 8 529 MLO family AT2G39200 63.4 7.5e-192 667.2
Mch3g0494 . 5 472 MLO family AT2G39200 51.1 3.9e-132 468.8
Mch3g0487 . 8 407 MLO family AT1G61560 66.9 9.3e-160 560.1
Mch2g0365 . 8 414 MLO family AT1G61560 67.1 1.2e-159 559.7
Mch9g1770 . 1 404 MLO family AT1G61560 65.4 6.9e-155 543.9
Mch1g1656 . 27 420 MLO family AT1G61560 52.0 2.8e-116 415.6
Mch10g1829 . 27 421 MLO family AT1G61560 50.6 8.3e-108 387.5
Mch1g1656 . 11 488 MLO family AT2G17430 63.7 1.9e-173 605.9
Mch10g1829 . 6 481 MLO family AT2G17430 61.0 7.4e-157 550.8
Mch3g0487 . 6 449 MLO family AT2G17430 50.9 2.0e-122 436.4
Mch1g1656 . 7 566 MLO family AT2G17480 62.6 1.2e-192 669.8
Mch10g1829 . 9 569 MLO family AT2G17480 59.8 1.2e-176 616.7
Mch2g0365 . 8 461 MLO family AT2G17480 50.8 3.1e-124 442.6
Mch3g0487 . 8 454 MLO family AT2G17480 52.3 6.9e-124 441.4
Mch1g1656 . 23 384 MLO family AT1G42560 58.9 3.3e-119 425.2
Mch10g1829 . 27 386 MLO family AT1G42560 55.6 1.5e-108 389.8
Mch2g1535 . 11 430 MLO family AT4G24250 56.5 1.4e-123 439.9
Mch7g0780 . 1 419 MLO family AT4G24250 52.8 2.6e-114 409.1
Mch7g0781 . 7 421 MLO family AT4G24250 52.5 2.3e-110 396.0
Mch1g1656 . 5 385 MLO family AT5G65970 66.7 8.9e-146 513.8
Mch10g1829 . 6 386 MLO family AT5G65970 63.5 3.4e-137 485.3
Mch2g0365 . 2 379 MLO family AT5G65970 51.9 6.9e-106 381.3
Mch3g0487 . 2 372 MLO family AT5G65970 50.1 4.8e-99 358.6
Mch1g1656 . 23 468 MLO family AT2G33670 62.1 2.6e-156 548.9
Mch10g1829 . 27 469 MLO family AT2G33670 56.0 3.7e-134 475.3
Mch9g1770 . 63 514 MLO family AT1G11310 64.4 3.8e-171 598.2
Mch3g0487 . 63 497 MLO family AT1G11310 65.0 9.1e-165 577.0
Mch2g0365 . 63 518 MLO family AT1G11310 63.0 9.4e-162 567.0
Mch7g0780 . 1 512 MLO family AT2G44110 57.8 5.2e-165 577.8
Mch7g0781 . 1 514 MLO family AT2G44110 57.9 1.4e-162 569.7
Mch7g0780 . 1 485 MLO family AT4G02600 75.9 9.2e-213 736.5
Mch7g0781 . 3 487 MLO family AT4G02600 72.9 1.0e-203 706.4
Mch10g0552 . 6 563 MLO family AT1G11000 67.6 4.1e-214 741.1
Mch10g1764 . 1 461 MLO family AT1G11000 52.1 3.1e-129 459.1
Mch7g0780 . 1 485 MLO family AT4G02600 75.9 9.2e-213 736.5
Mch7g0781 . 3 487 MLO family AT4G02600 72.9 1.0e-203 706.4
Mch9g1770 . 63 514 MLO family AT1G11310 64.4 3.8e-171 598.2
Mch3g0487 . 63 497 MLO family AT1G11310 65.0 9.1e-165 577.0
Mch2g0365 . 63 518 MLO family AT1G11310 63.0 9.4e-162 567.0
Mch3g0494 . 10 473 MLO family AT3G45290 53.9 1.5e-135 479.9
Mch10g0552 . 6 563 MLO family AT1G11000 67.6 4.1e-214 741.1
Mch10g1764 . 1 461 MLO family AT1G11000 52.1 3.1e-129 459.1
Mch1g1656 . 23 468 MLO family AT2G33670 62.1 2.6e-156 548.9
Mch10g1829 . 27 469 MLO family AT2G33670 56.0 3.7e-134 475.3
Mch3g0487 . 8 407 MLO family AT1G61560 66.9 9.3e-160 560.1
Mch2g0365 . 8 414 MLO family AT1G61560 67.1 1.2e-159 559.7
Mch9g1770 . 1 404 MLO family AT1G61560 65.4 6.9e-155 543.9
Mch1g1656 . 27 420 MLO family AT1G61560 52.0 2.8e-116 415.6
Mch10g1829 . 27 421 MLO family AT1G61560 50.6 8.3e-108 387.5
Mch1g1656 . 11 488 MLO family AT2G17430 63.7 1.9e-173 605.9
Mch10g1829 . 6 481 MLO family AT2G17430 61.0 7.4e-157 550.8
Mch3g0487 . 6 449 MLO family AT2G17430 50.9 2.0e-122 436.4
Mch1g1656 . 7 566 MLO family AT2G17480 62.6 1.2e-192 669.8
Mch10g1829 . 9 569 MLO family AT2G17480 59.8 1.2e-176 616.7
Mch2g0365 . 8 461 MLO family AT2G17480 50.8 3.1e-124 442.6
Mch3g0487 . 8 454 MLO family AT2G17480 52.3 6.9e-124 441.4
Mch1g1656 . 23 384 MLO family AT1G42560 58.9 3.3e-119 425.2
Mch10g1829 . 27 386 MLO family AT1G42560 55.6 1.5e-108 389.8
Mch1g1656 . 5 385 MLO family AT5G65970 66.7 8.9e-146 513.8
Mch10g1829 . 6 386 MLO family AT5G65970 63.5 3.4e-137 485.3
Mch2g0365 . 2 379 MLO family AT5G65970 51.9 6.9e-106 381.3
Mch3g0487 . 2 372 MLO family AT5G65970 50.1 4.8e-99 358.6
Mch11g1081 . 9 555 MLO family AT5G53760 70.1 1.1e-214 743.0
Mch4g2243 . 9 547 MLO family AT5G53760 67.4 8.0e-210 726.9
Mch9g1770 . 4 495 MLO family AT2G39200 67.2 4.3e-195 677.9
Mch2g0365 . 8 503 MLO family AT2G39200 68.1 3.1e-193 671.8
Mch3g0487 . 8 529 MLO family AT2G39200 63.4 7.5e-192 667.2
Mch3g0494 . 5 472 MLO family AT2G39200 51.1 3.9e-132 468.8
Mch2g1535 . 11 430 MLO family AT4G24250 56.5 1.4e-123 439.9
Mch7g0780 . 1 419 MLO family AT4G24250 52.8 2.6e-114 409.1
Mch7g0781 . 7 421 MLO family AT4G24250 52.5 2.3e-110 396.0
Mch11g1081 . 1 555 MLO family AT1G26700 66.4 1.4e-206 716.1
Mch4g2243 . 9 547 MLO family AT1G26700 67.0 3.1e-203 704.9
Mch7g0780 . 1 512 MLO family AT2G44110 57.8 5.2e-165 577.8
Mch7g0781 . 1 514 MLO family AT2G44110 57.9 1.4e-162 569.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011947 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 30