Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g0555 | ATGGCTTCTCGTTTCTGGACCCAGGGTGGCAGTGGTAGTGATACTGAAGCGGATGAGAGTGAATATGATGAGGAGATTGATGACACAATTGATAAAAACCAAACTAATAGAAGCAGATACCTGGAAGAGAATGCCAGTGACAGTGATGATTCTGGCGACCAAAAGCGTATTGTCAGGTCGGCTAAAGACAAGCGTTTTGAGGAGATGTCTGCTACTGTGGATCAGATGAAAAATGCAATGAAGATCAATGACTGGGTTAGCCTGCAGGAGAGTTTTGATAAGATAAATAAGCAGCTTGAGAAAGTCATGCGTGTCACCGAGTCTGAGAAGGTTCCACCTCTTTATATCAAAGCACTTGTGATGCTAGAGGACTTCCTAAATCAAGCCATGGCTAATAAGGAAGCTAAGAAGAAAATGAGTACTAGCAATGCTAAGGCCTTGAATTCAATGAAACAGAAGCTGAAGAAGAACAATAAGCAATATGAAGAGTTAATTACTAAGTATAGGGAGAATCCTGAGATTGAGGAAGAAAAAGAGGAGGAGGAGGAGACAGAGGAGGAGGAGGAGGATGATGATTCTGAAATTGAGGATCCTTCTAAAATCATGTCAGGTTCAGAAGATGAAGAAGAAGATGACGACGATCATGAGGATGACCCGGATCATGGTGGTGGTGCATGGGTGAAAAAGATGAGCAAAAAAGATAAGCTCATGGATAAGCAGTTTATGAAGGATCCTAGTGGGATCACATGGGATACTGTCAACAAGAAATTTAAAGAGGTTGTAGCTGCTCGCGGTAGGAAGGGAACTGGAAGATTTGAGCAGGTTGAGCAGCTTACCTTCTTAACAAAAGTTGCTAAGACCCCTGCACAGAAGCTTGAGATTTTGTTCAGTGTTATATCTGCCCAATTTGATGTAAATCCTGGTCTCAGTGGGCACATGCCTATCAATGTGTGGAAGAAGTGTGTGCAAAATATGCTTTCTATAATCGACATTCTTGTACAGAATTCTAACATCATGGTGGATGATATGGTTGAACCTGATGAAAATGAGAGCCAGAAGCCAGTGGACTATAAGGGCACAATTCGTGTTTGGGGAAACTTGGTTGCTTTTGTTGAGAGGATAGACACTGAGTTTTTTAAGAGTTTGCAGTGTATTGATCCACATACACGTGAGTATGTTGAAAGACTTAGAGATGAGCCAATGTTTATGGTTCTCGCCCAAAATGTTCAAGAATATTTGGAACGAGTTGGGGATTACAAAGCAGCTTCAAAAGTTGCCTTAAGGCGTGTTGAATTAATCTATTACAAACCACAAGGGGTCTATGATGCCATGAGAAAGCTTGCAGAGCTGTCAGAAGATGGAGATGGTGGAGATGCAAGTGAGGAGGCTAAAGTAGTAGAAGAGAGTAGGGGCCCTGCGGCATTTATTGTTACTCCGGAGATCGTACCTCGCAAACCCACCTTTCCAGAGAGTAGTAGGGGGTTTATGGACATTCTGGTGACCCTCATATACCAATATGGAGATGAGCGGACTAAAGCACGAGCTATGCTCTGTGATATCTATCACCATGCTCTCTTGGATGAATTTTATATTTCTCGCGACTTGTTACTGATGAGTCATTTACAAGATAGTATTCAACACTTGGACATTTCAACACAGATCCTTTTCAACAGGGCAATGGCTCAACTTGGTCTATGTGGATTTCGGGTTGGCTTGATAAATGAAGGGCATGGCTGCCTTTCAGAATTATATTCTGGTGGAAGGGTGAAGGAATTGCTTGCACAAGGAGTCTCACAAAGCCGATATCACGAAAAGACTCCAGAACAGGAAAGGCTTGAAAGAAGAAGGCAGATGCCTTACCACATGCACATAAATCTTGAGCTCCTGGAGGCTGTGCATTTAATATGTGCTATGCTGCTGGAAGTTCCCAACATGGCAGGCAATGTTCATGATGCAAAGCGCAAGGTTATTAGTAAGAACTTTAGACGGTTACTCGAGGTGAGTGAGAGACAAACGTTCACTGGTCCTCCTGAGAATGTCAGAGATCATGTAATGGCTGCTACCCGAGCCCTTCGCAAGGGTGATTTCCAGAAGGCTTTCGATGTCATTGCATCACTAGATGTATGGAAACTACTTAGAAATCGTGATGAAGTGCTGGAAATGGTTAAAGGAAAGATCAAGGAAGAGGCTTTGAGGACTTACCTTCTCACATACTCTTCTTCTTACGATTCTCTGAGTTCAGACCATCTCACCCGAATGTTTGACCTTGCAGAGGGTCAAACACACAGTATTGTTAGCAAGATGATGATCAATGAGGAGCTTCATGCAAGTTGGGATCAGCCTAGTGGGTGTGTTATCTTCCACGACGTTAAGCACACCCGGTTACAGGGCCTGGCATTCCAGTTGGCAGATAAGCTGTCAATCCTTGCTGAAACTAATGAGAGGGCAGTGGAGGCGAGAATTGGAGGAGGAGGATTAGATTTACCCATGAGGAGAAGAGACAACCAAGAATATGCTTCTGGAGCTGGAGGCGGGGGTAGCAGGTGGCCGGACAACACTTATAATCATGGCAGGCAAGGTGGTGGTAGTTCGCGGGCAGGATATAGCAGCGGAGGGCGAGGCCAAGGCGGGGTTGGTGGATATTCTAGAGACCACCGGACAGGGCAGTCACGAGGAGGCAATGCAGGGTACCAGAGCACCCGTTACCAAGATGCCGCATATGGATCGGGGAGGACTGCTTATCAGTCTGGTTCTGTTAGAGGATCCCAGATGGATGCTTCAGCTCGTATGGTCAGCCTCAACAAAGGGGTTCATGCTTAA | 2820 | 44.79 | MASRFWTQGGSGSDTEADESEYDEEIDDTIDKNQTNRSRYLEENASDSDDSGDQKRIVRSAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPPLYIKALVMLEDFLNQAMANKEAKKKMSTSNAKALNSMKQKLKKNNKQYEELITKYRENPEIEEEKEEEEETEEEEEDDDSEIEDPSKIMSGSEDEEEDDDDHEDDPDHGGGAWVKKMSKKDKLMDKQFMKDPSGITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVISAQFDVNPGLSGHMPINVWKKCVQNMLSIIDILVQNSNIMVDDMVEPDENESQKPVDYKGTIRVWGNLVAFVERIDTEFFKSLQCIDPHTREYVERLRDEPMFMVLAQNVQEYLERVGDYKAASKVALRRVELIYYKPQGVYDAMRKLAELSEDGDGGDASEEAKVVEESRGPAAFIVTPEIVPRKPTFPESSRGFMDILVTLIYQYGDERTKARAMLCDIYHHALLDEFYISRDLLLMSHLQDSIQHLDISTQILFNRAMAQLGLCGFRVGLINEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAGNVHDAKRKVISKNFRRLLEVSERQTFTGPPENVRDHVMAATRALRKGDFQKAFDVIASLDVWKLLRNRDEVLEMVKGKIKEEALRTYLLTYSSSYDSLSSDHLTRMFDLAEGQTHSIVSKMMINEELHASWDQPSGCVIFHDVKHTRLQGLAFQLADKLSILAETNERAVEARIGGGGLDLPMRRRDNQEYASGAGGGGSRWPDNTYNHGRQGGGSSRAGYSSGGRGQGGVGGYSRDHRTGQSRGGNAGYQSTRYQDAAYGSGRTAYQSGSVRGSQMDASARMVSLNKGVHA | 939 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3650992 | 3655244 | + | MC10g0452 | Mch10g0555 | 677648 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g0555 | 939 | MobiDBLite | consensus disorder prediction | 203 | 218 | - | - | |
Mch10g0555 | 939 | SUPERFAMILY | Winged helix DNA-binding domain | 716 | 792 | IPR036390 | - | |
Mch10g0555 | 939 | MobiDBLite | consensus disorder prediction | 136 | 154 | - | - | |
Mch10g0555 | 939 | MobiDBLite | consensus disorder prediction | 852 | 870 | - | - | |
Mch10g0555 | 939 | ProSiteProfiles | PCI domain profile. | 620 | 792 | IPR000717 | - | |
Mch10g0555 | 939 | MobiDBLite | consensus disorder prediction | 1 | 56 | - | - | |
Mch10g0555 | 939 | MobiDBLite | consensus disorder prediction | 828 | 900 | - | - | |
Mch10g0555 | 939 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Mch10g0555 | 939 | Pfam | Eukaryotic translation initiation factor 3 subunit 8 N-terminus | 43 | 652 | IPR008905 | GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro) | |
Mch10g0555 | 939 | Pfam | PCI domain | 717 | 789 | IPR000717 | - | |
Mch10g0555 | 939 | PANTHER | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED | 1 | 884 | IPR027516 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005852(PANTHER)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0006413(PANTHER)|GO:0031369(PANTHER)|GO:0031369(InterPro) | |
Mch10g0555 | 939 | Hamap | Eukaryotic translation initiation factor 3 subunit C [EIF3C]. | 2 | 867 | IPR027516 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro) | |
Mch10g0555 | 939 | Coils | Coil | 144 | 194 | - | - | |
Mch10g0555 | 939 | MobiDBLite | consensus disorder prediction | 155 | 174 | - | - | |
Mch10g0555 | 939 | MobiDBLite | consensus disorder prediction | 29 | 56 | - | - | |
Mch10g0555 | 939 | MobiDBLite | consensus disorder prediction | 175 | 196 | - | - | |
Mch10g0555 | 939 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 721 | 809 | IPR000717 | - | |
Mch10g0555 | 939 | MobiDBLite | consensus disorder prediction | 136 | 229 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g0555 | K03252 | - | csv:101203990 | 1551.18 |