Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0557 ATGGGCAAAGGACCATTTTCTTTCCGCCGGAGCAGTAGCCGTCGCCGCCCCAAGAAGGCAGCTCAGTTATCGCCGTCACCTCAGCCTCCGCCGATTGGCGTAAGTTCTCCTCCTATTAACAATAATAGTAGCGCCATGGTCAGTGGTGGTGGTGGGGCTGTGGGAAAGGTGAAGAAGAAGGCTGGAGGAGCGAGGCTGTGGATGCGTCTCGACAGATGGGGGCAGTCGGAGCTTGTAGAGTGGGACAAGAGCGCTATAATACGGCGTGCTGCAATTCCAGCTAGGGATTTGAGGATCCTTGGTCCTGTTTTCTCCCACTCCTCTAACATCCTTGCCAGGGAAAAGGCCATGGTTGTCAATTTGGAGTTTATAAAAGCTCTAGTTACTGCTGAAGAAGTCCTGCTACTTGACCCTCTTCGCCAAGAGGTTATTCCATTTGTGGATCAGCTAAGGAAGCTACTTGCTAAGAATAGTTCATCTCAGACTCAGGGCCATGGAGATGGAACTGTGGATGAACGTGAAAATGATGTGAATGTGTCGAGAGGAGGAAAATGGTTGCCAGTTTCGGAAGCCGTTGAAGGTGAGCAGTATGAGCTCCCGTTTGAGTTTCAGGTTCTGGAAAATGCGTTGGAGGTTGTGTGTATGTACTTAGATTCCAGTGTGGCAGACCTTGAGAGAGATGCCTATCCTGTCCTGGATGAACTGGCTAGGAATGTCAGCACCAAGAATCTTGAACATGTGAGGAGCTTGAAAAGTAATCTTACCCGTATTCTTGCACGTGTTCAGAAGGTGCGGGACGAGATAGAACATCTGTTAGACGATAATGAAGACATGGCACAATTATATTTGACAAGGAAATGGATGCAGAATCAACAATACGATGCTTTGCTGGGAGGCATGGCTTCCAACAGCACCACTGCCATTGTTCCCAATCTTCGTCGACTTAGTTCCACCAAGAGTGGAAGCGTGGTGACCAGCAATTATTTGGATGATAATGATGTTGAGGATCTGGAAATGTTGCTTGAGGCATATTTTATGCAGTTGGATGGTACACGTAACAGGATATTATCGGTCAGGGAATACATTGATGACACCGAGGATTACGTCAACATTCAACTCGACAACCAGAGAAATGAACTCATTCAGTTTCAACTGACCCTGACCATTGCTTCATTTGCCATAGCTGTTGAAACCTTAATTGCTGGGTTGTTCGGTATGAACATCCCTTGTACACTGTACAATAAGGACGGGATATTCGAGTACTTCGTCGGAGAATTCCAGAAGCTGTGTTTTCAAGTCCAGCCTCATGAACCGTGTAAGTTATAA 1326 46.98 MGKGPFSFRRSSSRRRPKKAAQLSPSPQPPPIGVSSPPINNNSSAMVSGGGGAVGKVKKKAGGARLWMRLDRWGQSELVEWDKSAIIRRAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKALVTAEEVLLLDPLRQEVIPFVDQLRKLLAKNSSSQTQGHGDGTVDERENDVNVSRGGKWLPVSEAVEGEQYELPFEFQVLENALEVVCMYLDSSVADLERDAYPVLDELARNVSTKNLEHVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQNQQYDALLGGMASNSTTAIVPNLRRLSSTKSGSVVTSNYLDDNDVEDLEMLLEAYFMQLDGTRNRILSVREYIDDTEDYVNIQLDNQRNELIQFQLTLTIASFAIAVETLIAGLFGMNIPCTLYNKDGIFEYFVGEFQKLCFQVQPHEPCKL 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3662533 3671328 + MC10g_new0104 Mch10g0557 677650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0557 441 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 45 423 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Mch10g0557 441 FunFam Magnesium transporter MRS2-1 55 138 - -
Mch10g0557 441 Coils Coil 247 281 - -
Mch10g0557 441 MobiDBLite consensus disorder prediction 1 54 - -
Mch10g0557 441 CDD Mrs2_Mfm1p-like 67 424 IPR039204 -
Mch10g0557 441 Pfam Magnesium transporter MRS2-like 80 294 - -
Mch10g0557 441 Pfam Magnesium transporter MRS2-like 328 377 - -
Mch10g0557 441 MobiDBLite consensus disorder prediction 157 176 - -
Mch10g0557 441 Gene3D - 55 138 - -
Mch10g0557 441 Gene3D Magnesium transport protein CorA, transmembrane region 141 380 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0557 Mch-Chr10:3662533 Mch6g1995 Mch-Chr6:22361998 7.45E-90 dispersed
Mch10g0557 Mch-Chr10:3662533 Mch7g1013 Mch-Chr7:14312521 9.88E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0557 K16075 - csv:101203496 650.973