Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0571 ATGTTGTTTTTCATTGTTTTTACATTCTTCTCTCTTCTGGGTTCCTCTTCTTCCCACAGTTTGGTCAGTGATTTCCATGTTTTGCTTGCTCTCAAACAAGGGTTTGAATTCTCTGACTCTCCTGCACTGAGCACTTGGACTGCCTCGAATTTCAGCTCGGTTTGTTCATGGATTGGAATTCGGTGCTCCGACGAACGAGTTGTTTCGGTTGACTTGACAGATTTGGGCCTTGGTGGCTCTGTTTCGCCTCTGATTTCTAGGCTCGACCAGCTTTCTGAGTTGTCTGTTGCAGGAAACAACTTCACTGGTAGCATTGAGGTTGTGAGTTTGAGTTACCTCCGATTCCTTAATATCTCGAACAACCAGTTCAGCGGGGCGCTGGACTGGAACTTTTCGAGCGTGCCGAATTTGGAAGTGTTAGATGCCTATGACAACAACTTCACTGCTCAGCTTCCCACTGGGGTTTTGGACTTACAGAACCTCAAGTACTTGGACCTTGCAGGTAACTTTTTCTATGGAAAAATCCCAGAAAGCTATGGCAGTTTAGAAGGGTTGGAATATCTCTCTCTTGCAGGGAACGATTTGGATGGTAAAATCCCAGGTGAGTTGGGAAATCTTAGAAATTTGAGAGAACTTTACTTGGGACATTACAATGCATTCGAAGGTGGTCTCCCGGCCGAGCTCGGGAAGTTGGTTAATTTGGTTGTCATGCAGATTTCAGACTGCAGTTTGGATGGTCAAATTCCTCATGAACTGGGGAATTTGAAGGCCTTGAACACTCTATATTTGCATACGAATCTACTCTCGGGTTCGGTCCCAAAGCAGTTAGCCAACTTGACAAACTTGGTCTTTCTCGATCTCTCCAACAATGCGCTCACCGGAGAAATCCCACCCGAGTTCGTTGATCTCAGACAGCTCAAGCTTTTCAACCTCTTCATGAACAAACTGCACGGATCTATTCCAGACTACATAGCAGATTTGCCAAACTTGGAGACCTTGGGGCTGTGGATGAACAACTTCACCGGCACAATCCCGAAGAATCTCGGTCGAAATGGGAGGCTTCAGCTCCTCGATTTGTCGACGAACAAGCTCACGGGTACAATTCCTCAGGATTTGTGCACATCAAATCAGCTGAGAATACTGATTCTGATGAACAACTTCCTGTTTGGGCCAATCCCTGATGGATTGGGTACATGTACAAGTCTTACAAAAGTGAGGCTGGGGCAGAACTATCTTAATGGAAGCATTCCCAATGGCTTCATTTACTTGCCACAGCTAAATCTAGCAGAGTTTCAAGACAATTACCTTTCAGGTACAATTTCAGAGAATTGGGAGAGTTCTTCAAAACCCATCAAATTAGGGCAACTTAATCTATCCAACAATCTTCTCTCTGGTACTCTACCATTTTCACTCTCTAATTTCTCTTCTCTGCAAATTCTCCTCCTCAATGGAAACCAGTTTTCTGGTTCGATCCCCCCCTCCATTGGAGAGCTCAATCAACTTCTGAAGCTTGATCTTAGCAGAAACTCACTTTCAGGCGAAATTCCACCTGAAATTGGGAGTTGTATCCATCTCACTTACCTTGATTTGAGCAAGAACAACCTCTCTGGCCCGATTCCACTTGAAATTTCAAACGCACATATTCTGAATTACCTCAATTTGTCGAGAAATCACCTGAATCAATCCCTACCGAAATCGATAGGGGCCATGAAAAGCCTCACGATTGCAGATTTCTCCTTCAACGACTTCTCCGGTAAGCTGCCGGAATCCGGACAGCTTGCGTTCTTCAACGCTTCGTCCTTCGCCGGAAATCCTCAACTCTGCGGCTCGCTCCTCAACAATCCCTGCAATTTCGCGACAACCGCGACGAAACAAGGCAAAACTCCGGCGTATTTCAAGCTAATCTTCGCCCTCGGCCTGCTGATTTGCTCTCTAGTGTTCGCCATCGCTGCGATCGTCAAAGCGAAATCATTCAAAAGAAACGGATCTGGTTCTTGGAAAATGACCTCATTCCAAAAGCTGGATTTCACCGTCTACGACGTCCTGGAATGCGTGAAAGACGGGAACGTGATCGGAAGAGGCGGCGCCGGCATCGTGTACCACGGAAAAATGCCGAACGGAGTAGAAATCGCGGTGAAGAAACTCCTAGGGTTCGGCCCTAACAGCCACGACCACGGATTCCGAGCCGAAATCCAAACCCTAGGCAACATTCGACACCGAAACATCGTCAGATTACTCGCATTCTGCTCCAACAAGGAGACGAATCTCCTCGTGTACGAATACATGAGGAACGGAAGCTTAGGCGAAGCCCTCCATGGTAAAAAAGCTTCGTTCCTCGGATGGAATTTGAGGTACAAAATCGCCATTGAAGCCGCCAAAGGTCTCTGCTACCTCCACCACGATTGCTCCCCACTAATCGTCCACCGCGACGTGAAATCCAACAACATTCTGTTGAATTCCAACTTCGAAGCTCACGTCGCCGACTTCGGGCTCGCAAAGTTCATGTTTGACGGCGGCGCGTCGGAATGCATGTCGGTGATCGCCGGATCTTACGGCTACATCGCTCCCGAATATGCATACACATTAAGAGTCGACGAGAAAAGCGACGTGTATAGCTTTGGGATTGTGCTACTAGAGCTCTTGACGGGACGTCGTCCAGTCGGAGATTTTGGGGAAGGAGTGGTGGACATAGCGCAATGGTGCAAAAGAGCTATAGCGAACGGCGAGAAAGAAAACGACATAATTTGCATAGTTGACAAAAGAGTGGGGATGATACCAAAAGAAGAAGCAAAGCACTTATTCTTCATAGCAATGTCATGCGTACAAGAGAATAGTGTGGAGAGACCAACGATGAGAGAAGTTGTTCAAATGCTAGCTGAGTTTCCTCACCAATCATCCAACTGTTACCAATCTTCCTCCTCTTCTTCTCCCATTCAAAATATGAAAAAAGGCGAAAAGGAAAAAGAAGACCAGTTGAAGTCGAAACCAGATCTTTTGGTTTAA 3003 46.52 MLFFIVFTFFSLLGSSSSHSLVSDFHVLLALKQGFEFSDSPALSTWTASNFSSVCSWIGIRCSDERVVSVDLTDLGLGGSVSPLISRLDQLSELSVAGNNFTGSIEVVSLSYLRFLNISNNQFSGALDWNFSSVPNLEVLDAYDNNFTAQLPTGVLDLQNLKYLDLAGNFFYGKIPESYGSLEGLEYLSLAGNDLDGKIPGELGNLRNLRELYLGHYNAFEGGLPAELGKLVNLVVMQISDCSLDGQIPHELGNLKALNTLYLHTNLLSGSVPKQLANLTNLVFLDLSNNALTGEIPPEFVDLRQLKLFNLFMNKLHGSIPDYIADLPNLETLGLWMNNFTGTIPKNLGRNGRLQLLDLSTNKLTGTIPQDLCTSNQLRILILMNNFLFGPIPDGLGTCTSLTKVRLGQNYLNGSIPNGFIYLPQLNLAEFQDNYLSGTISENWESSSKPIKLGQLNLSNNLLSGTLPFSLSNFSSLQILLLNGNQFSGSIPPSIGELNQLLKLDLSRNSLSGEIPPEIGSCIHLTYLDLSKNNLSGPIPLEISNAHILNYLNLSRNHLNQSLPKSIGAMKSLTIADFSFNDFSGKLPESGQLAFFNASSFAGNPQLCGSLLNNPCNFATTATKQGKTPAYFKLIFALGLLICSLVFAIAAIVKAKSFKRNGSGSWKMTSFQKLDFTVYDVLECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGPNSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKASFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSNFEAHVADFGLAKFMFDGGASECMSVIAGSYGYIAPEYAYTLRVDEKSDVYSFGIVLLELLTGRRPVGDFGEGVVDIAQWCKRAIANGEKENDIICIVDKRVGMIPKEEAKHLFFIAMSCVQENSVERPTMREVVQMLAEFPHQSSNCYQSSSSSSPIQNMKKGEKEKEDQLKSKPDLLV 1000
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3796896 3803058 - MC10g0467 Mch10g0571 677664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0571 1000 Gene3D Transferase(Phosphotransferase) domain 1 762 985 - -
Mch10g0571 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 654 761 - -
Mch10g0571 1000 SMART LRR_typ_2 327 351 IPR003591 -
Mch10g0571 1000 SMART LRR_typ_2 279 303 IPR003591 -
Mch10g0571 1000 SMART LRR_typ_2 352 375 IPR003591 -
Mch10g0571 1000 SMART LRR_typ_2 498 522 IPR003591 -
Mch10g0571 1000 SMART LRR_typ_2 182 206 IPR003591 -
Mch10g0571 1000 SMART LRR_typ_2 134 158 IPR003591 -
Mch10g0571 1000 SMART LRR_typ_2 255 278 IPR003591 -
Mch10g0571 1000 SUPERFAMILY L domain-like 350 609 - -
Mch10g0571 1000 Gene3D Ribonuclease Inhibitor 23 130 IPR032675 -
Mch10g0571 1000 PRINTS Leucine-rich repeat signature 354 367 - -
Mch10g0571 1000 PRINTS Leucine-rich repeat signature 498 511 - -
Mch10g0571 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 762 975 - -
Mch10g0571 1000 Gene3D Ribonuclease Inhibitor 324 619 IPR032675 -
Mch10g0571 1000 SUPERFAMILY RNI-like 69 389 - -
Mch10g0571 1000 Pfam Protein tyrosine and serine/threonine kinase 688 958 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0571 1000 Pfam Leucine Rich Repeat 281 302 IPR001611 GO:0005515(InterPro)
Mch10g0571 1000 Pfam Leucine Rich Repeat 476 498 IPR001611 GO:0005515(InterPro)
Mch10g0571 1000 Pfam Leucine Rich Repeat 353 373 IPR001611 GO:0005515(InterPro)
Mch10g0571 1000 Pfam Leucine Rich Repeat 453 474 IPR001611 GO:0005515(InterPro)
Mch10g0571 1000 Pfam Leucine Rich Repeat 233 255 IPR001611 GO:0005515(InterPro)
Mch10g0571 1000 Pfam Leucine Rich Repeat 524 545 IPR001611 GO:0005515(InterPro)
Mch10g0571 1000 Pfam Leucine Rich Repeat 501 522 IPR001611 GO:0005515(InterPro)
Mch10g0571 1000 Pfam Leucine Rich Repeat 113 132 IPR001611 GO:0005515(InterPro)
Mch10g0571 1000 Pfam Leucine Rich Repeat 185 206 IPR001611 GO:0005515(InterPro)
Mch10g0571 1000 Pfam Leucine Rich Repeat 549 569 IPR001611 GO:0005515(InterPro)
Mch10g0571 1000 Pfam Leucine Rich Repeat 160 182 IPR001611 GO:0005515(InterPro)
Mch10g0571 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 219 324 - -
Mch10g0571 1000 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 960 IPR050647 -
Mch10g0571 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 131 218 - -
Mch10g0571 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0571 1000 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Mch10g0571 1000 Gene3D Phosphorylase Kinase; domain 1 653 761 - -
Mch10g0571 1000 SMART serkin_6 685 958 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0571 1000 MobiDBLite consensus disorder prediction 965 980 - -
Mch10g0571 1000 Gene3D Ribonuclease Inhibitor 131 217 IPR032675 -
Mch10g0571 1000 Gene3D Ribonuclease Inhibitor 218 322 IPR032675 -
Mch10g0571 1000 MobiDBLite consensus disorder prediction 965 1000 - -
Mch10g0571 1000 SUPERFAMILY Protein kinase-like (PK-like) 674 958 IPR011009 -
Mch10g0571 1000 ProSiteProfiles Protein kinase domain profile. 685 961 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0571 1000 MobiDBLite consensus disorder prediction 981 1000 - -
Mch10g0571 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 331 620 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0571 Mch-Chr10:3796896 Mch11g0105 Mch-Chr11:701294 1.17E-134 dispersed
Mch1g2183 Mch-Chr1:20940614 Mch10g0571 Mch-Chr10:3796896 7.59E-36 dispersed
Mch10g0571 Mch-Chr10:3796896 Mch1g1334 Mch-Chr1:15371501 9.30E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77002 PF07714 PK_Tyr_Ser-Thr 1.10E-43 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0571 - - - 0.0