Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch10g0581 | ATGGCTCTGGTCTTGCATTCTTGGAAGTCAAACAAAAATGCTTTCAAAGCTCAAATTGCTGGAGAATACAATGGTGTTAAAGTTGACATTGTCCCAGATTTTACAATGGGCGTAAGCAATAAGACACCTGAATTTCTCAAAATGAATCCGATTGGGAAGGTTCCTGTGCTGGAAACACCTGATGGTGCTGTCTTTGAAAGCAATGCTATTGCTCGCTATGTTGCTCGCTTGAAGGACAGTGGCTTATTTGGCTCTTCCTCGATCGATTATGGACACGTTGAACAATGGATCGATTTCTCCTCATTGGAAATTGATACTTATATTTTGACTATACTCAGGCCTAGATTTGGATATGGTGTTTACGATGCTGCTGTAAAGGAAGCTGCCAATACTGCTCTAAAGCGAGCTTTGGCTGCTTTGAACACTCACCTTGCTTCAAACACATACCTCGTTGGACATTCTGTGACACTGGCTGATATCATCATGACATGCAATCTGTACTTCGGATTCACTTATTGGTTTACTAAAAGCTTTTCTTCCGAGTTCCCTCATGTAGAGAGGTACTTCTGGACATTGGTAAATCAACCAAATTTCAAAAAGATAATGGGTGAGGTGAAGCAAGCAGATGCTGTTCTACCGTTGAAAAAACCCGAAGAGGCTGCTGCAGATGCCAAGCCAAAGGCTAAGGATGAGCCCAAGAAACAAGAAGAGAAGCCCAAGGCCGCAGCTGCTGAGGAAGAGGAGGCACCAAAACCCAAGGCCAAAAATCCTCTTGACCTGCTTCCTCCCAGTAAGATGATTTTGGACGAGTGGAAACGTCTCTACTCGAACACAAAAACTAACTTCCGCGAGGTTGCAATCAAAGGATTCTGGGACATGTATGACCCTGAAGGCTATTCCCTTTGGTTCTGTGACTACAAGTACAACGACGAGAATACTGTTTCATTTGTGACATTGAACAAAGTCAGCGGATTTCTCCAGAGGATGGATCTTGCTCGCAAGTATGCATTCGGAAAGATGCTCGTGATCGGATCAGAGGCACCCTTTAAGGTTAAGGGGCTATGGCTTTTCCGCGGACAGGAAATCCCGAAATTTGTGATGGACGAGTGCTACGACATGGAACTGTACGAGTGGAAGAAGGTCGATATCTCTGATGAAGCCCAGAAGGAGAGGGTAAACCAAATGATTGAAGACCAGGAGCCATTCGAGGGAGAAGCTCTTTTGGATGCCAAATGCTTCAAGTAA | 1245 | 44.5 | MALVLHSWKSNKNAFKAQIAGEYNGVKVDIVPDFTMGVSNKTPEFLKMNPIGKVPVLETPDGAVFESNAIARYVARLKDSGLFGSSSIDYGHVEQWIDFSSLEIDTYILTILRPRFGYGVYDAAVKEAANTALKRALAALNTHLASNTYLVGHSVTLADIIMTCNLYFGFTYWFTKSFSSEFPHVERYFWTLVNQPNFKKIMGEVKQADAVLPLKKPEEAAADAKPKAKDEPKKQEEKPKAAAAEEEEAPKPKAKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLVIGSEAPFKVKGLWLFRGQEIPKFVMDECYDMELYEWKKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK | 414 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 3866813 | 3869979 | - | MC10g0477 | Mch10g0581 | 677674 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch10g0581 | 414 | Gene3D | Glutaredoxin | 1 | 74 | - | - | |
| Mch10g0581 | 414 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 1 | 414 | IPR044628 | GO:0004364(InterPro) | |
| Mch10g0581 | 414 | FunFam | Elongation factor 1 gamma | 79 | 215 | - | - | |
| Mch10g0581 | 414 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 86 | 212 | IPR010987 | - | |
| Mch10g0581 | 414 | CDD | GST_N_EF1Bgamma | 3 | 77 | - | - | |
| Mch10g0581 | 414 | SFLD | Glutathione Transferase (cytosolic) | 3 | 189 | IPR040079 | - | |
| Mch10g0581 | 414 | FunFam | Elongation factor 1B gamma | 1 | 74 | - | - | |
| Mch10g0581 | 414 | Pfam | Glutathione S-transferase, C-terminal domain | 109 | 196 | IPR004046 | - | |
| Mch10g0581 | 414 | FunFam | Elongation factor 1-gamma 1 | 254 | 414 | - | - | |
| Mch10g0581 | 414 | Gene3D | - | 79 | 214 | - | - | |
| Mch10g0581 | 414 | Pfam | Elongation factor 1 gamma, conserved domain | 253 | 361 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
| Mch10g0581 | 414 | Pfam | Glutathione S-transferase, N-terminal domain | 3 | 76 | IPR004045 | - | |
| Mch10g0581 | 414 | SFLD | Main (cytGST) | 3 | 189 | - | - | |
| Mch10g0581 | 414 | SUPERFAMILY | eEF1-gamma domain | 255 | 414 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
| Mch10g0581 | 414 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 254 | 414 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
| Mch10g0581 | 414 | MobiDBLite | consensus disorder prediction | 218 | 254 | - | - | |
| Mch10g0581 | 414 | SMART | EF1G_2 | 253 | 361 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
| Mch10g0581 | 414 | SUPERFAMILY | Thioredoxin-like | 2 | 78 | IPR036249 | - | |
| Mch10g0581 | 414 | SUPERFAMILY | GST C-terminal domain-like | 73 | 207 | IPR036282 | - | |
| Mch10g0581 | 414 | MobiDBLite | consensus disorder prediction | 218 | 261 | - | - | |
| Mch10g0581 | 414 | CDD | GST_C_EF1Bgamma_like | 89 | 209 | - | - | |
| Mch10g0581 | 414 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
| Mch10g0581 | 414 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 254 | 414 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch10g0581 | K03233 | - | csv:101215571 | 667.537 |