Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0601 ATGGCGAAAGAGCCCGTTTGCGTGACCGGAGCCAACGGATTCATCGGATCGTGGGTGGTCCGTACGCTTCTGGAGGCCGGCTACACCGCGATTCACGCCTCCATCTTCCCCGGCTCGGATCCATCCCACTTGATTGATCTCCAGGCCGCGGCGAGCTCTAATTCGAAGGTTAGGGTTTTCGAAGCGGACGTGATGGACGGGGAGGCCGTGGCTAGGGCTGTGGAAGGGTGTAGGGGCGTGTTCCACATCGCGTCGACGTGCACGCTGGAGGATCCGAAGGATCCGCAGAGAGAGCTGGTGGAGCCGGCGGTGAATGGAACTTTGAATGTTCTTGATGCGGCGAAGAAATTGGGAGTGAGGCGCGTTGTTCTTACATCTTCGATTTCGGCTCTGGTTCCGAATTCGGTGTGGCCCAAGGACAAGGCCATCGATGAATCTTCGTGGACCGACTTGGCATACTGCAAATCCCGCCAGAAATGGTATCCAGTGTCCAAAACATTGGCAGAAAAAGCAGCATGGGAGTTTGTAGAGAAGCATGGAATAGATGTAGTTTCAATTCTGCCAGCCACATGTCTTGGTCCTCTTCTGCAGCCTAATCTCAATGCAAGCTGTGCAGTATTGCAGCAGCTGCTCCAAGGATCAAAGGATAGCCAGGAATATCACTGGTTGGGCGCTGTCCATGTCAAAGACATTGCAAAAGCACAAGTTTTACTGTTTGAGACCCCCTCTGCTTCTGGTAGATATCTTTGCACCAATGGCATCTATCAATTTGCTGATTTTGCACACAAAGTCTCCAAAATCTACCCTCAATTCCCAGTTCACAGGTTCGTGGGGGAAACACAGCCGGGCTTGGTTGCCTGCAGAGATGCAGCCAAGAGGTTGATTGAACTGGGACTTGTTTTCACTCCTCTTGAAGTTGCCATTAGAGATACGGTGGAGAGCCTGAGAAGCAAAGGCTTTCTGCAGTAG 969 52.32 MAKEPVCVTGANGFIGSWVVRTLLEAGYTAIHASIFPGSDPSHLIDLQAAASSNSKVRVFEADVMDGEAVARAVEGCRGVFHIASTCTLEDPKDPQRELVEPAVNGTLNVLDAAKKLGVRRVVLTSSISALVPNSVWPKDKAIDESSWTDLAYCKSRQKWYPVSKTLAEKAAWEFVEKHGIDVVSILPATCLGPLLQPNLNASCAVLQQLLQGSKDSQEYHWLGAVHVKDIAKAQVLLFETPSASGRYLCTNGIYQFADFAHKVSKIYPQFPVHRFVGETQPGLVACRDAAKRLIELGLVFTPLEVAIRDTVESLRSKGFLQ 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4069331 4072717 + MC10g0497 Mch10g0601 677694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0601 322 CDD FR_SDR_e 6 299 - -
Mch10g0601 322 Pfam NAD dependent epimerase/dehydratase family 6 245 IPR001509 -
Mch10g0601 322 Gene3D - 1 322 - -
Mch10g0601 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 314 IPR050425 GO:0016616(PANTHER)
Mch10g0601 322 FunFam Cinnamoyl-CoA reductase 1 1 322 - -
Mch10g0601 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 316 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0601 Mch-Chr10:4069331 Mch3g0069 Mch-Chr3:772385 9.43E-109 dispersed
Mch10g0601 Mch-Chr10:4069331 Mch9g0463 Mch-Chr9:3434303 6.40E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0601 - - - 0.0