Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0618 GAACTCGTGACTGAAATGGCTGGGGGAGGAATGATTCGGCAGTTGCTGAGGAAATTTCCATCACAATCTTCAACCCCTCCTTTGTCCTCCTCCCTTATTTCGAAGAATGAGGAAGCTGGCTTTGCTGGTATGAACTCCTTTAGAAGGCTTGCACTCCTTGGAGCAGGCATTTCTGGGTTTTTCAGTTTTGCAACTTTGGCATCTGCTGATGAGGCTGAACATGGTTTGGAGTGTCCGAACTATCCCTGGCCTCACCAGGGCATTTTGAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTACCAACAAGTGTGCGCATCTTGTCATTCCATGTCTTTAATATCATACCGTGATTTGGTTGGTGTTGCATATACTGAAGAGGAGACAAAAGCAATGGCTGCTGAAATTGAGGTAGTTGATGGGCCCAATGATGAGGGTGAAATGTTCACTCGTCCAGGTAAACTCAGTGACCGGTTTCCTCAACCATACGCAAATGAACAAGCAGCTAGATTCGCTAATGGTGGAGCATACCCTCCGGATCTAAGCCTTATCACAAAAGCTCGTCATAACGGTCAGAATTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCACCTGCTGGTGTTTCGATCCGAGATGGTTTGCACTATAACCCTTATTTCCCTGGGGGAGCAATTGCGATGCCTAAGATGCTTAATGATGGAGCTGTTGAATATGAAGATGGTACCCCTGCGACAGAAGCACAGATGGGAAAAGATGTTGTATCGTTCTTGTCATGGGCTGCTGAACCAGAAATGGAAGAAAGGAAACTGATGGGATTCAAATGGATCTTTGTGCTCTCTCTTGCTCTACTTCAGGCCGGATATTACCGCCGATTGAAGTGGTCAGTTTTGAAGTCCCGCAAGCTGGTTCTTGATGTAGTCAATTAG 939 45.79 ELVTEMAGGGMIRQLLRKFPSQSSTPPLSSSLISKNEEAGFAGMNSFRRLALLGAGISGFFSFATLASADEAEHGLECPNYPWPHQGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIRDGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLKWSVLKSRKLVLDVVN 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4196229 4200825 + MC10g0512 Mch10g0618 677711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0618 312 FunFam Cytochrome c1, heme protein, mitochondrial 268 312 - -
Mch10g0618 312 FunFam Cytochrome c1, heme protein 72 267 - -
Mch10g0618 312 PRINTS Cytochrome C1 signature 179 203 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 PRINTS Cytochrome C1 signature 267 282 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 PRINTS Cytochrome C1 signature 228 247 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 PRINTS Cytochrome C1 signature 101 120 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 PRINTS Cytochrome C1 signature 81 100 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 PRINTS Cytochrome C1 signature 146 166 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 PRINTS Cytochrome C1 signature 217 228 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 PRINTS Cytochrome C1 signature 248 267 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 Gene3D - 72 267 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 Gene3D - 268 311 - -
Mch10g0618 312 ProSiteProfiles Cytochrome c family profile. 95 202 IPR009056 GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 267 311 IPR021157 -
Mch10g0618 312 PANTHER CYTOCHROME C1 32 310 IPR002326 GO:0005750(PANTHER)|GO:0006122(PANTHER)|GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 SUPERFAMILY Cytochrome c 76 266 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
Mch10g0618 312 Pfam Cytochrome C1 family 83 299 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0618 Mch-Chr10:4196229 Mch10g0693 Mch-Chr10:4742156 2.95E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0618 K00413 - csv:101215010 607.831