Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0621 TCACCACAGCCGAGGAGATTCTCCTACGGATATCTTTCTATGGCGACAGACAACTTTTCTATGCACAGAAAATTGGGCCAAGGAGGATTTGGGGCGGTGTTTAAAGGCCATTTGCCTGGTGCTGATAAGACAGTTGCTGTGAAGAAGATTTTCAAAGGCTCAAGGCAGGGGAGGAGAGAGTACTTAAGTGAAGTGAAGATCATCAGCAAAATGAGGCACAAGAATTTGGTGCAACTTATAGGCTGGTGCCATCAGAGGGATAATAGTGAGTTTCTTCTTGTTTATGAGTTCATGCCCAATGGAAGCCTTGATTCTCATCTCTTTGGTGGCAGCCCTCCTCCCCCGTGGCCGGTGAGGTACAAAATATCCTTGGGACTAGCTGCTGCACTGTTATATCTGCACGAAGAACGGGAGCCCAATGTCATCCACAGAGATATCAAATCGAGCAACGTGCTCCTAGATTCCGATTTCACCTCAAAGCTTGGCGACTTCGGATTAGCGAGGCTGGCGAGGAACAACGAACACAACTCGAGAACACCTGAGTTGGCAGGAACGTTCGGGTACATGGCTCCGGAGTACATAAGCAAGGGTAGGGCGAGCAAGGAGTCAGACATATTCAGCTACGGAGTTGTTCTACTCGAGATTGTGAGCGGAAGAAAGTGTCGTGATCATTGGGAGAAGGGGCTCATAGAGTTGGTTTGGGATGCTTATGGAAGAGGAGAGCTCGTTGAAGCTTTGGATGGGAAACTGCGAGAGGGTTTAATGGAGCAGCCAAGAGAGGCTGAGCGAATGAGCTTGGTTGGGCTGTGGTGTGCTCATCCTGATGCCACTCACAGGCCATCTATCAAGAAAGTGATTAAAGTTCTTAGTTTTGAGGAGGCAGCGCCTAATTTACCACCAAAAATGCCGCTCCCAACTTTCAACTATGATGCTAATTTATCCCTTAAATTTCCTAAAATGAATGTTGTATGTCCAGAGACAAACTTTGGCCTGACTTGTACTCAATTCTTGATCTTCTCTTTGATTCTCTTCAAAGCTCACTCTTTTTCCTTCACCTTCTCCAATTTCCAACAAAACAATCCCGACATATTCTTGGAAGGCGATAGTTTCATCAACAATGATGTTATTCAACTGACAAAGAACCAGGCCGATGGCCCTCTTACCGACAGTGCAGGTCGAGCGTCATATTCGCAGCCAGTACGACTATGGGACACCTCCACAGGGCAAGTCGCAGACTTCACCACCCACTTCTCCTTCAGAATCAACACGCTCAACGAAACTTCTTTTGGCGATGGCATCTCATTTTTCATCACCCCTTTCGATGCAAGAATTCCCAGTAACTCAACTGGGGGATTTCTTGGATTATTCAGCTCCGGTTCCGCTTTTGATGTCTCTAAGAATCAAGTGGTTGCGGTTGAGGTTGATTGTCGGAAAAACGATTGGGATCCGAGTGATAATCACTTGGGAATCAACGTGAATTCTATTAAATCTGTGGCTGATGTTGTTTGGAACAGTAGCATGAGGGATGGGAGATTGGCAAATGCGTGGATCACTTACGATTCCTCCACCAAAAACTTGTCTGTTTTTCTAACTTATGTTAAAGATCCGATTTTTAATGGAACTTTCAGCCTTTCACATGTTGTTGACTTGAGAAACGAATTGCCCGAAAGGGTCAGGGTGGGATTCTCCGCTGCCACAGGGGAATGGTTCCAAATACATAACATTATTTCTTGGTCCTTCAACTCAACTTTGGAGATCGATGGTGGAAAAGACAACAATAGAAATATTGGTTTGGCAGTTGGGCTTGGCGTTGGGCTTGGTGTTTTGATATGTGGGTTGGGTTTTGTGGGGTTTGTTTGGTGGGGGAGGCGATTTAGAAGGGAAATGGAAGATGTGGATGATTCTATAGATGATGAGTTTGAAAAAGGAACTGGCCCCAAAAGGTTCACTTACAGGGAATTGACTCAAGCGACTAAGAACTTTGATGAAACAGGCAAGCTTGGAGAAGGAGGATTTGGAGGTGTTTACAAGGGTTTGTTAACAGAATCCAATGTCGAAGTAGCTGTGAAGAGGGTTTCAAGAGGATCGAGACAAGGGAAAAAAGAGTACATATCGGAAGTGAAGATTATAAGTCGTTTGAGACATAGGAATCTTGTTCAACTCTTCGGTTGGTGCCATGAAAAGGGAGAGTTCCTTTTGGTTTATGAGTTCATGCCCAATGGTAGTCTCGATACACACCTCTTCCGAGGTAAAACGATGCTAACTTGGCCAGTCAGATACAAAATAGCACTAGGGTTGGCTTCTGCGTTACTATATCTTCATGAAGAAGGGGAACAATGCGTGGTGCATAGAGATATCAAATCCAGCAATATAATGTTGGACTCGAGTTTCAATGCTAAGCTTGGAGATTTTGGCCTTGCGAGGTTTGTAGACCATGAGTTGGGCTCACAAACCACCATCTTGGCTGGCACCATGGGCTATCTAGCGCCAGAGTGCGTGACAGATGGCAAGGCGAGTAAAGAATCAGATGTTTACAGTTTTGGAGTGGTGGCTCTAGAGATCGCATGCGGGCGACGGCCAGTAGAATCTAGAGCAGAGCCTGACCAGGTGAGACTCGTTGAGTGGGTTTGGGAGTTGTATGGCAGAGGCCAAGTCCTAGAGGCGGCAGACAAGAGACTAGAAATGGAATTTGATGAGCAGCAAATGGAGGGTTTGATGGTGGTTGGATTGTGGTGCTGCCACCCCGATTTCAAGTTGCGGCCTTCTATAAGACAAGTGATTAATGTTCTAAACTCTGAATCTCCACTACCCGCACTACCCGCAAAGTTGCCC 2832 45.97 SPQPRRFSYGYLSMATDNFSMHRKLGQGGFGAVFKGHLPGADKTVAVKKIFKGSRQGRREYLSEVKIISKMRHKNLVQLIGWCHQRDNSEFLLVYEFMPNGSLDSHLFGGSPPPPWPVRYKISLGLAAALLYLHEEREPNVIHRDIKSSNVLLDSDFTSKLGDFGLARLARNNEHNSRTPELAGTFGYMAPEYISKGRASKESDIFSYGVVLLEIVSGRKCRDHWEKGLIELVWDAYGRGELVEALDGKLREGLMEQPREAERMSLVGLWCAHPDATHRPSIKKVIKVLSFEEAAPNLPPKMPLPTFNYDANLSLKFPKMNVVCPETNFGLTCTQFLIFSLILFKAHSFSFTFSNFQQNNPDIFLEGDSFINNDVIQLTKNQADGPLTDSAGRASYSQPVRLWDTSTGQVADFTTHFSFRINTLNETSFGDGISFFITPFDARIPSNSTGGFLGLFSSGSAFDVSKNQVVAVEVDCRKNDWDPSDNHLGINVNSIKSVADVVWNSSMRDGRLANAWITYDSSTKNLSVFLTYVKDPIFNGTFSLSHVVDLRNELPERVRVGFSAATGEWFQIHNIISWSFNSTLEIDGGKDNNRNIGLAVGLGVGLGVLICGLGFVGFVWWGRRFRREMEDVDDSIDDEFEKGTGPKRFTYRELTQATKNFDETGKLGEGGFGGVYKGLLTESNVEVAVKRVSRGSRQGKKEYISEVKIISRLRHRNLVQLFGWCHEKGEFLLVYEFMPNGSLDTHLFRGKTMLTWPVRYKIALGLASALLYLHEEGEQCVVHRDIKSSNIMLDSSFNAKLGDFGLARFVDHELGSQTTILAGTMGYLAPECVTDGKASKESDVYSFGVVALEIACGRRPVESRAEPDQVRLVEWVWELYGRGQVLEAADKRLEMEFDEQQMEGLMVVGLWCCHPDFKLRPSIRQVINVLNSESPLPALPAKLP 944
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4223925 4242603 - MC10g0515 Mch10g0621 677714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0621 944 CDD STKc_IRAK 675 931 - -
Mch10g0621 944 FunFam L-type lectin-domain containing receptor kinase IX.1 4 97 - -
Mch10g0621 944 Gene3D Transferase(Phosphotransferase) domain 1 98 296 - -
Mch10g0621 944 SUPERFAMILY Concanavalin A-like lectins/glucanases 347 584 IPR013320 -
Mch10g0621 944 FunFam Lectin-domain containing receptor kinase A4.3 98 309 - -
Mch10g0621 944 SUPERFAMILY Protein kinase-like (PK-like) 645 931 IPR011009 -
Mch10g0621 944 Pfam Protein tyrosine and serine/threonine kinase 20 288 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0621 944 ProSiteProfiles Protein kinase domain profile. 19 298 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0621 944 FunFam L-type lectin-domain containing receptor kinase IX.1 646 737 - -
Mch10g0621 944 ProSitePatterns Protein kinases ATP-binding region signature. 667 690 IPR017441 GO:0005524(InterPro)
Mch10g0621 944 Pfam Legume lectin domain 349 592 IPR001220 GO:0030246(InterPro)
Mch10g0621 944 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524(InterPro)
Mch10g0621 944 Gene3D Transferase(Phosphotransferase) domain 1 738 942 - -
Mch10g0621 944 ProSiteProfiles Protein kinase domain profile. 661 939 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0621 944 FunFam L-type lectin-domain containing receptor kinase IX.1 347 593 - -
Mch10g0621 944 CDD STKc_IRAK 25 289 - -
Mch10g0621 944 Gene3D - 346 597 - -
Mch10g0621 944 ProSitePatterns Legume lectins alpha-chain signature. 554 563 IPR000985 -
Mch10g0621 944 PANTHER - 353 937 IPR050528 GO:0005886(PANTHER)
Mch10g0621 944 Gene3D Phosphorylase Kinase; domain 1 646 737 - -
Mch10g0621 944 Gene3D Phosphorylase Kinase; domain 1 4 97 - -
Mch10g0621 944 SMART serkin_6 19 291 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0621 944 SMART serkin_6 661 936 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0621 944 SUPERFAMILY Protein kinase-like (PK-like) 4 310 IPR011009 -
Mch10g0621 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0621 944 FunFam Lectin-domain containing receptor kinase A4.3 738 944 - -
Mch10g0621 944 Pfam Protein kinase domain 663 928 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0621 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0621 944 CDD lectin_legume_LecRK_Arcelin_ConA 349 584 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0621 Mch-Chr10:4223925 Mch4g0866 Mch-Chr4:6207696 5.99E-282 dispersed
Mch7g0745 Mch-Chr7:12074482 Mch10g0621 Mch-Chr10:4223925 9.64E-38 dispersed
Mch10g0621 Mch-Chr10:4223925 Mch11g1127 Mch-Chr11:7892222 1.93E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77004 PF00069 Pkinase 2.80E-51 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0621 - - - 0.0