Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0626 CCGCTTCTTCTTCTGCTTCTCTTTCTCCTTCTTCACCTCCATTTCCACCACTCCATTTCTGCTCACCTCCCCGAATACCGCGCGCTTCTCTCCCAGAAGAGCTCCGTTTCCGATGATTCCAGATCCGCGCTCTCCACTTGGGACGCCGCCACCGCCCACTGCACCTGGACGGGCGTCACCTGCGATTCCCGCCGGCATGTCATCGGCCTCGACCTCTCCGGGATGAACCTCTCCGGTACTCTGTCTCCTGACCTTGCCAATCTTCGATTCCTCACCAATTTTTCCGTCGCGGATAATCAGATTTCCGGCCCGATTCCGCCGGAGATCTCTGCCATATCTACGCTTAAATGCCTCAACGTCTCTAACAATATTATTAACGGTCCAATACCGCCGGAGATTGGTAATCTAACGACGCTTCGTGAACTTTACATTGGGTATTACAACACCTATGACGGCGGTTTACCGCCGGAGATCGGAAACTTATCGGAACTGGTTCGATTGGATGCTGCGAACTGTGGATTAACGGGTGAGATTCCCCGTGAACTCGGGAAACTTCAGAAACTGGATACTCTGTTTCTTCAGGTGAACGGTTTATCTGGACCTTTGATTCCAGAGCTCGGGAGCTTAAAGGGCTTGAAATCCATGGATTTGTCCAACAACATTCTTGTCGGTGAGATTCCGGACTCATTCTCTCAACTGAAGAACTTGACGCTTTTGCATCTTTTCAGGAATAAGCTTCATGGAGCTATTCCACAGTTCATCGGTGACTTGCCGGAGCTGGAAGTACTGCAGTTGTGGGAAAATAACTTCACTGGCTCCATTCCCTATAGTCTGGGGAAGAATGGGAGGCTTGCTGTTCTTGACATTTCTTCGAATAAATTGACTGGAACTTTACCTCCCGATATGTGCCGTGGAAATCGACTTCAGACTTTGATTACCCTCGGCAACTTCTTGTTCGGTCCAATCCCTGAATCTCTCGGTAGATGCGAGTCGCTGAGCCGTATTCGTATGGGGGAGAATTTTCTCAATGGTTCGATCCCCAAAGGTCTTTTCGGTTTGCCCAATCTATCTCAGGTCGAATTGCAGAACAATTTTCTCACCGGAGAATTTCCAGTTACGGGTTCCATCTCTGCCAATCTCGGCCAAATTAGTCTCTCGAACAATCAGCTCTCGGGGTCCTTACCACCGACGGTCGGAAATTTCTCCGGTGTCCAGAAGCTCCTGCTAGATGGGAACCAGTTCTCCGGCCGAATCCCACCCGAAATAGGGCGTTTACAGCAGCTCTCGAAGATTGATTTCAGCCACAACAAATTATCTGGCCCAATAGCGCCGGAGATCGGCCAATGCAGGCTCCTGACCTTCGTTGATCTCAGCCCGGAATTGGCCATCGCTTATAACAATTACAAGCCGAGTCCGATACCTTCCGAATTCGGAAATCTGAAAAAGCTCGTTAACATGTTCTTACCCACCTCGAATCTCATCGGGCCCATCCCTGATTCCATCGGAAACCTTGCTCTGCTCACCAACCTTGATTTATCTAACAATTCCATTTCGGGTCCGATCCCGGATTCAATCGGCGGACTGAGGAGCATAGAGACGATTCAGCTCTATAACAACCGAATCTCCGGTGAGTTGCCGGAGAGCATTGGTAATTTGACTACTCTGTTTTCTCTGGACGTGTCGCAGAACAATCTCACCGGAAAATTGTCTGAAAAAATCGCTGCGCTCCCTCTTCAGGTTTTGTATCTCAATGACAATTTCCTCGAAGGCGAGGTCCCGGAGAGTGTAGCTTCTAACCCGAATCTTTACAGATTGAAACTTTTCAACAATAGCCTTTCCGGTAAACTTCCCGGAAATCTTGGTTTGAATTCGAATTTGGTTGAGATTGATGTTTCCTCCAACAATTTCGATGGTGAAGTGCCGAAGTTCCTCTGCCATAGAAAGCAACTTCAGAGGCTTGTTTTATTCGACAACAGTTTCTCGGGAAATTTCTCAGAATCGTACGGCGATTGCGATTCTCTGAATTATGTCAGAATTGAGAACAATCAACTTTCCGGCGAGGTACCGAATTCGTTCTGGAATCTTTCTCGGCTTGATCGAGTTCAATTGTCGAACAACCTGTTTCAGGGCTCTGTTCCGCCGGCGATAAGCGGCGCTCGCGCTCTCACCGTGTTGTTGATTTCTGGTAATAACTTCTCCGGCCAATTGCCGGTGGAGATTTGCAAACTGCGGGAACTCGTACGGTTTGACGTCAGCAGGAATAGATTCTCCGGCAACATTCCTTCCTGTATAACGGATTTGAAGAAACTCCAAAAGCTCGACATGCAAGAAAACGCGTTCGCCGGTGAAATTCTCAAATCAGTCACGCCGTGGAAAGAATTAACCGACTTGAATCTCTCCCACAACCAATTTTCCGGCGAGATTCCGTCTCAACTCGGCGATTTACCCGTGTTAGCGTACCTAGATCTCTCAGCAAATTCACTTTCCGGCGAAATCCCCGAGGAACTGACGAAGCTGAATTTGAACCAATTCAACTTATCCGGCAACAAATTGAACGGAAAAGTTCCTTCCGGCTTCAACAACGAACTCTTCGTCGGAAGCCTACTGGGTAATCCGGGTCTCTGTAGCCCGGATTTGAAACCGCTGAAACCGTGCCCGAAATCCAAGCCCACCGCTTTCTATGTCGTGGTCGTCCTCTCGGTTCTCGCCGTCCTCCTCGTCGGGTCTCTCATCTGGGTAATCAAATTCAAGCTCAATCTCTTCCGCAAATCGAAATCTCCATGGAATGTAACAAAATTCCAACGGGTCGGGTTCGACGAGGAAGATGTAATTCCGCACCTGACGAGCTCCAACGTAATCGGGTCGGGCGGGTCGGGTACTGTTTTCAAGGTGGGTCTGAAAACGGGTCACACCGTCGCCGTGAAGAGTCTCTGGGGAGGCCACAACAAATTGGATACAGAGGGAGTTTTCGAGTCCGAAGTTGAGACACTGGGTCGGATCCGGCATGCGAACATCGTGAAATTGCTGTTCAGTTGTAGCAATGGCGAAGGAAACAGAATTCTTGTGTACGAGTATATGGAGAATGGGAGCTTGGGAGATGTTCTTCACTTACGCAAATTGGAAGCTCTATCGGATTGGTCGAAACGATTCGACATAGCCATCGGAGCGGCTCAGGGATTGGCTTACCTCCACCACGACTGCGTCCCCCCGATAATCCACCGCGACGTTAAGAGCAACAACATTCTCTTGGACGGAGAATTTCAGCCTCGGGTCGCCGATTTCGGATTAGCCAAGACGCTGCAGCAGCATGCAGAGGACGACGACGGTGGTCTAATGTCTCGCGTCGCTGGCTCCTACGGCTATATCGCCCCTGAGTATGGGTACACCATGAAAGTGACGGAGAAGAGCGACGTGTATAGCTTTGGGGTGGTTCTAATGGAGTTGGTGACTGGGAAGCGGCCGAACGATCCGTGGTTTGGAGAGAACAGAGATCTTGTGAAATGGGTGACTGAAGTTGCTCTATCAGACGAAGAGGATGAGAAGGCAATGAGTTTAGACGATATTATTGATGAAAAGTTGGATCCATCGACATGTGAGATTGAAGAAATAGCCAAAATGTTGGATGTGGCAATGCTTTGCACTTCTCCTTTGCCAAATGACAGACCTTCCATGAGAAGAGTGGTTGAGTTGATAAGGGATAGCAAATTGGTTCGTCCCAAATCTTGA 3726 49.14 PLLLLLLFLLLHLHFHHSISAHLPEYRALLSQKSSVSDDSRSALSTWDAATAHCTWTGVTCDSRRHVIGLDLSGMNLSGTLSPDLANLRFLTNFSVADNQISGPIPPEISAISTLKCLNVSNNIINGPIPPEIGNLTTLRELYIGYYNTYDGGLPPEIGNLSELVRLDAANCGLTGEIPRELGKLQKLDTLFLQVNGLSGPLIPELGSLKGLKSMDLSNNILVGEIPDSFSQLKNLTLLHLFRNKLHGAIPQFIGDLPELEVLQLWENNFTGSIPYSLGKNGRLAVLDISSNKLTGTLPPDMCRGNRLQTLITLGNFLFGPIPESLGRCESLSRIRMGENFLNGSIPKGLFGLPNLSQVELQNNFLTGEFPVTGSISANLGQISLSNNQLSGSLPPTVGNFSGVQKLLLDGNQFSGRIPPEIGRLQQLSKIDFSHNKLSGPIAPEIGQCRLLTFVDLSPELAIAYNNYKPSPIPSEFGNLKKLVNMFLPTSNLIGPIPDSIGNLALLTNLDLSNNSISGPIPDSIGGLRSIETIQLYNNRISGELPESIGNLTTLFSLDVSQNNLTGKLSEKIAALPLQVLYLNDNFLEGEVPESVASNPNLYRLKLFNNSLSGKLPGNLGLNSNLVEIDVSSNNFDGEVPKFLCHRKQLQRLVLFDNSFSGNFSESYGDCDSLNYVRIENNQLSGEVPNSFWNLSRLDRVQLSNNLFQGSVPPAISGARALTVLLISGNNFSGQLPVEICKLRELVRFDVSRNRFSGNIPSCITDLKKLQKLDMQENAFAGEILKSVTPWKELTDLNLSHNQFSGEIPSQLGDLPVLAYLDLSANSLSGEIPEELTKLNLNQFNLSGNKLNGKVPSGFNNELFVGSLLGNPGLCSPDLKPLKPCPKSKPTAFYVVVVLSVLAVLLVGSLIWVIKFKLNLFRKSKSPWNVTKFQRVGFDEEDVIPHLTSSNVIGSGGSGTVFKVGLKTGHTVAVKSLWGGHNKLDTEGVFESEVETLGRIRHANIVKLLFSCSNGEGNRILVYEYMENGSLGDVLHLRKLEALSDWSKRFDIAIGAAQGLAYLHHDCVPPIIHRDVKSNNILLDGEFQPRVADFGLAKTLQQHAEDDDGGLMSRVAGSYGYIAPEYGYTMKVTEKSDVYSFGVVLMELVTGKRPNDPWFGENRDLVKWVTEVALSDEEDEKAMSLDDIIDEKLDPSTCEIEEIAKMLDVAMLCTSPLPNDRPSMRRVVELIRDSKLVRPKS 1241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4259756 4289721 + MC10g0518 Mch10g0626 677719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0626 1241 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 1026 1240 - -
Mch10g0626 1241 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 147 304 - -
Mch10g0626 1241 ProSitePatterns Protein kinases ATP-binding region signature. 953 975 IPR017441 GO:0005524(InterPro)
Mch10g0626 1241 Gene3D Phosphorylase Kinase; domain 1 922 1025 - -
Mch10g0626 1241 SUPERFAMILY L domain-like 624 881 - -
Mch10g0626 1241 FunFam Leucine-rich repeat receptor protein kinase EMS1 371 464 - -
Mch10g0626 1241 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1071 1083 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0626 1241 SMART serkin_6 947 1237 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0626 1241 PANTHER RECEPTOR-LIKE PROTEIN 55 600 1231 - -
Mch10g0626 1241 FunFam Receptor-like protein kinase HSL1 577 882 - -
Mch10g0626 1241 Gene3D Ribonuclease Inhibitor 227 464 IPR032675 -
Mch10g0626 1241 Gene3D Ribonuclease Inhibitor 24 144 IPR032675 -
Mch10g0626 1241 Gene3D Transferase(Phosphotransferase) domain 1 1026 1238 - -
Mch10g0626 1241 SUPERFAMILY Protein kinase-like (PK-like) 941 1229 IPR011009 -
Mch10g0626 1241 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Mch10g0626 1241 ProSiteProfiles Protein kinase domain profile. 947 1236 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0626 1241 Pfam Protein kinase domain 950 1228 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0626 1241 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 24 134 - -
Mch10g0626 1241 SUPERFAMILY RNI-like 335 693 - -
Mch10g0626 1241 Gene3D Ribonuclease Inhibitor 579 888 IPR032675 -
Mch10g0626 1241 Pfam Leucine Rich Repeat 379 401 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine Rich Repeat 212 233 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine Rich Repeat 428 449 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine Rich Repeat 840 861 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine Rich Repeat 818 839 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine Rich Repeat 115 136 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine Rich Repeat 794 815 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine Rich Repeat 284 303 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine Rich Repeat 722 743 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine Rich Repeat 405 425 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine Rich Repeat 673 695 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Pfam Leucine rich repeat 507 565 IPR001611 GO:0005515(InterPro)
Mch10g0626 1241 Gene3D Ribonuclease Inhibitor 465 578 IPR032675 -
Mch10g0626 1241 Gene3D Ribonuclease Inhibitor 146 226 IPR032675 -
Mch10g0626 1241 SUPERFAMILY L domain-like 52 371 - -
Mch10g0626 1241 FunFam Leucine-rich receptor-like protein kinase family protein 473 571 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0626 Mch-Chr10:4259756 Mch4g0284 Mch-Chr4:1818025 7.70E-94 dispersed
Mch1g1334 Mch-Chr1:15371501 Mch10g0626 Mch-Chr10:4259756 2.07E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77005 PF00069 Pkinase 1.30E-42 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0626 - - - 0.0