Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0637 ATGGGTTTTGATGATCTTTCTCCCACCGGCTTGGTCTTGGGGTTGGGGCTCTCCGAGGCCTCTCCCAAGCCAGCGCCTGATCAACACAACCTCATCAAAAAGCCAGCACCTTGCTCCAGCTCCCTTGATTTTGACCCATGTTTGACTTTGGGGTTCTCCGGCGAGAGTGCTTACCGGAAGATTGACGATCATCATTTGTATCGCCAAGCTTCCCCTCATAGCAGCGCTGTTTCTTCCTTCTCCGGCGGCGGCGGCGGCCGTAGGGTCAAGAGGGAGAGGGATCTTAGCAGTGAAGAAGTTGACTTGGAGAGAGTTTCATCGAGAATCAGCGATGAAGATGAAGATGGTTCCAATACTAGGAAGAAACTTAGGCTCTCTAGAGAACAATCCGCTCTCTTGGAAGAAAGCTTCAAACAAAACAGCACTCTCAACCCTAAACAAAAACAAGCCTTGGCCAGACAGCTAAATCTGCGGCCACGACAAGTCGAAGTATGGTTTCAAAACAGGAGAGCCCGAACGAAATTGAAACAAACGGAAGTAGATTGTGAATTCTTGAAGAAGTGCTGCGAGACACTGACGGATGAAAATAGAAGACTGCAAAAGGAGCTTCAAGAACTCAAGGCGCTAAAGCTCGCCCAGCCTCTTTACATGCACATGCCCGCGGCGACGTTGACGATGTGCCCGTCGTGCGAAAGGGTCGGTGGCGCTCGCGACGGGGCTTCCAAAGCCAAATTTTCTATGGCTCCCAAGCCTCACTTTTACAACCCCTTCTCTAATCCTTCCGCGGCTTGTTAG 795 50.94 MGFDDLSPTGLVLGLGLSEASPKPAPDQHNLIKKPAPCSSSLDFDPCLTLGFSGESAYRKIDDHHLYRQASPHSSAVSSFSGGGGGRRVKRERDLSSEEVDLERVSSRISDEDEDGSNTRKKLRLSREQSALLEESFKQNSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELKALKLAQPLYMHMPAATLTMCPSCERVGGARDGASKAKFSMAPKPHFYNPFSNPSAAC 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4355527 4357170 + MC10g0525 Mch10g0637 677730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0637 264 Gene3D - 113 181 - -
Mch10g0637 264 MobiDBLite consensus disorder prediction 86 124 - -
Mch10g0637 264 FunFam Homeobox-leucine zipper protein 18 105 181 - -
Mch10g0637 264 SMART HOX_1 118 180 IPR001356 GO:0003677(InterPro)
Mch10g0637 264 MobiDBLite consensus disorder prediction 69 124 - -
Mch10g0637 264 ProSiteProfiles 'Homeobox' domain profile. 116 176 IPR001356 GO:0003677(InterPro)
Mch10g0637 264 Pfam Homeodomain 120 174 IPR001356 GO:0003677(InterPro)
Mch10g0637 264 Coils Coil 182 212 - -
Mch10g0637 264 MobiDBLite consensus disorder prediction 14 36 - -
Mch10g0637 264 ProSitePatterns 'Homeobox' domain signature. 151 174 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Mch10g0637 264 SUPERFAMILY Homeodomain-like 108 177 IPR009057 -
Mch10g0637 264 CDD homeodomain 120 177 IPR001356 GO:0003677(InterPro)
Mch10g0637 264 Pfam Homeobox associated leucine zipper 176 210 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Mch10g0637 264 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 11 256 IPR050762 -
Mch10g0637 264 SMART halz 176 219 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0637 Mch-Chr10:4355527 Mch11g0393 Mch-Chr11:2477892 6.94E-73 dispersed
Mch10g0637 Mch-Chr10:4355527 Mch10g0644 Mch-Chr10:4417250 1.27E-11 proximal
Mch1g1325 Mch-Chr1:15326825 Mch10g0637 Mch-Chr10:4355527 5.10E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42450 PF00046 Homeodomain 4.90E-16 CL0123 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0637 K09338 - csv:101205848 339.732