Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g0671 | ATGAAAATGATGTTAGTTAGGATGGGAGAACTCTATCTTACAGTGATAATACTGGCTTGCTTTCATTATTCTGCACTGTCTGATTATCAAGGTGATGCACTATTTGCATTGAAGAGTGCATTGAATGCAACAACAAACCAGCTCACAGATTGGAACCCAAATCAAGTCAATCCATGCACTTGGTCCAATGTTATATGTTATGGAAACAATGTGATCTCTGTATCCTTGTCAACAATGGGATTTACTGGAACCTTGTCTCCGAAAATTGGAGTTCTAACATCACTTTCAACCCTGATTTTGCTGGGCAATAATATAACTGGCGAGATACCAGAGGATTTTGGAAACCTGAAAAATTTGGTCAGTTTGGATTTGGGAAATAACAGCCTAACTGGTCAAATACCATCTTCCTTGGGTAATCTGAAGAAACTACAGTTCCTAACTCTTAGTCAAAATCATCTAACTGGGACTGTTCCTCAGTCACTTTCTAGCCTTCCTAGCTTGATCAGTCTTTTAGTTGATTTGAATGATCTCAGTGGTCCAATTCCGGAGCAGTTATTTCAAGTTCCAAAATTCAACTTCTCTGGAAACATGTTGACTTGTGGCAAAAAGTATCCTCAGCCTTGCGCTTCAGACAGTACAAACTCAGGTTCTTCAAATAAGCCGAAGGTTGGCCTGATAGTTGGACTTATTGCTGGGTTTACCGTTGTTCTTCTCTTGGTCTGTTTATTGTTTTGCTTGTGCAAAGGTAGATATAAAGCCTACAGGCGTGAAGTCTTTGTAGATGTTCCAGGTGAAGTTGATCGAAGAATTGCATTTGGTCAGCTGAAAAGATTTGCATGGAGGGAACTACAACTAGCTACAGAAAACTTTAGTGAGAAAAATGTTTTAGGACAAGGAGGCTTTGGAAAGGTGTATAAAGGGGTGCTTGCTGATGGCACAAAAGTTGCAGTGAAACGGTTGACTGATTATGAAAGTCCGGGGGGAGATGCTGCTTTCCAGCGTGAAGTTGAGATGATTAGTGTAGCTGTTCATAGGAATCTATTGCGGTTGATTGGATTTTGTACAACTCAGACAGAACGCCTATTGGTGTATCCCTATATGCAGAATTTGAGTGTTGCCTACCGTCTTCGAGAACTTAAGCCGGGAGAACCCATTTTAGATTGGCCTACTCGAAAACGTGTGGCATTGGGCACGGCTCGTGGTTTAGAGTATCTTCACGAACATTGCAATCCAAAGATTATTCATCGAGATGTTAAGGCCGCTAATGTATTGTTGGACGAAGATTTTGAAGCAGTTGTTGGCGATTTTGGTCTAGCAAAGTTGGTTGATGTTAGGAAGACTAATGTCACTACCCAAGTTCGGGGGACGATGGGTCACATAGCACCAGAATACTTATCAACAGGAAAGTCGTCAGAAAGGACTGATGTTTTTGGTTATGGTATCATGCTTTTAGAACTAGTTACTGGGCAACGTGCAATTGATTTCTCGCGCTTAGAAGAAGAAGATGATGTTTTACTCCTCGACCATGTGAAGAAAATGGAAAAGGAGAAGCGAATCAATACTATCGTCGATCGAAACCTGAATGACTACAACATTCAAGAGGTGGAGACGATGATCCAAGTTGCACTCCTGTGCACGCAGTCATGTTCAAATGACCGGCCAGCAATGTCGCATGTGATTCGAATGCTGGAAGGAGAGGGACTTGCAGAGAGGTGGGAAGAATGGCAGCATTCGGAGGGGACTCGCAGACAAGAAACTGAGAGACTGGAAAGAAGATTTGAATTGGGGGAGTACTCCATTCATAAACAGAATGCTATTCAGTTGTCTGGTGGAAGATGA | 1839 | 42.03 | MKMMLVRMGELYLTVIILACFHYSALSDYQGDALFALKSALNATTNQLTDWNPNQVNPCTWSNVICYGNNVISVSLSTMGFTGTLSPKIGVLTSLSTLILLGNNITGEIPEDFGNLKNLVSLDLGNNSLTGQIPSSLGNLKKLQFLTLSQNHLTGTVPQSLSSLPSLISLLVDLNDLSGPIPEQLFQVPKFNFSGNMLTCGKKYPQPCASDSTNSGSSNKPKVGLIVGLIAGFTVVLLLVCLLFCLCKGRYKAYRREVFVDVPGEVDRRIAFGQLKRFAWRELQLATENFSEKNVLGQGGFGKVYKGVLADGTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPYMQNLSVAYRLRELKPGEPILDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKMEKEKRINTIVDRNLNDYNIQEVETMIQVALLCTQSCSNDRPAMSHVIRMLEGEGLAERWEEWQHSEGTRRQETERLERRFELGEYSIHKQNAIQLSGGR | 612 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4619136 | 4638047 | + | MC10g0557 | Mch10g0671 | 677764 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g0671 | 612 | Gene3D | Ribonuclease Inhibitor | 27 | 209 | IPR032675 | - | |
Mch10g0671 | 612 | Pfam | Leucine rich repeat N-terminal domain | 28 | 66 | IPR013210 | - | |
Mch10g0671 | 612 | SMART | serkin_6 | 290 | 563 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g0671 | 612 | SUPERFAMILY | Protein kinase-like (PK-like) | 270 | 564 | IPR011009 | - | |
Mch10g0671 | 612 | SUPERFAMILY | L domain-like | 29 | 199 | - | - | |
Mch10g0671 | 612 | ProSitePatterns | Protein kinases ATP-binding region signature. | 296 | 318 | IPR017441 | GO:0005524(InterPro) | |
Mch10g0671 | 612 | Pfam | Protein tyrosine and serine/threonine kinase | 293 | 563 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g0671 | 612 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 27 | 210 | - | - | |
Mch10g0671 | 612 | Gene3D | Transferase(Phosphotransferase) domain 1 | 367 | 583 | - | - | |
Mch10g0671 | 612 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 16 | 611 | - | - | |
Mch10g0671 | 612 | Gene3D | Phosphorylase Kinase; domain 1 | 259 | 366 | - | - | |
Mch10g0671 | 612 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 367 | 583 | - | - | |
Mch10g0671 | 612 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 413 | 425 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g0671 | 612 | FunFam | Somatic embryogenesis receptor kinase 1 | 259 | 366 | - | - | |
Mch10g0671 | 612 | ProSiteProfiles | Protein kinase domain profile. | 290 | 568 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g0671 | 612 | Pfam | Leucine rich repeat | 94 | 153 | IPR001611 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0671 | Mch-Chr10:4619136 | Mch2g1499 | Mch-Chr2:11400069 | 3.76E-197 | dispersed | |
Mch10g1441 | Mch-Chr10:13874366 | Mch10g0671 | Mch-Chr10:4619136 | 1.03E-16 | dispersed | |
Mch8g1633 | Mch-Chr8:13518016 | Mch10g0671 | Mch-Chr10:4619136 | 2.73E-34 | dispersed | |
Mch10g0671 | Mch-Chr10:4619136 | Mch4g2400 | Mch-Chr4:25103365 | 1.90E-134 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77006 | PF00069 | Pkinase | 2.90E-43 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g0671 | - | - | - | 0.0 |