Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0676 ATGTTCCCTTTTTTTCTTCTTCTCCTGCTTCTCAGCTTCCACTTCACATCGGTTTCTCCGGCCACGCTCCGGCCAGATTACTACGCCAAATCATGCCCGGAGGCCGAATCCGTCGTCCGGAGTGTCATGAAGAAAGCTCTGTTCAGAGAGCCTCGGAGTGTCGCCTCCGTCATGCGCTTCCAGTTTCACGATTGCTTCGTCAATGGCTGTGATGCTTCTATGTTGCTGGATGATACTCCGACGATGCTCGGGGAAAAACTCGCTCTCTCCAACATAAATTCGCTTCGATCTTTCGAAGTCGTCGACGAAGTGAAGGAGGCGTTGGAGAAGGTCTGTCCTGGAATCGTCTCTTGCGCAGACATCATAATCATGGCATCTAGGGACGCCGTTGCTCTGACGGGCGGCCCCAACTGGGCGGTGAGATTGGGCAGGCTGGACAGCCTAACAGCGAGCCAAGAGGACTCAAACCAGATCATGCCAAGTCCAAGAGCCAATGCAAGCTCTCTAATAGACCTCTTCAACAACTACAATCTCTCTGTTAAAGATCTGGTTGCTCTTTCTGGCTCACACTCCATCGGCCAAGGCCGGTGTTTCTCCGTCATGTTTCGGCTCTACAACCAGTCGGGCACCGGGCGGCCGGACCCGGCTATCGAGCCAAGCTTCAGAGAAGAGCTCTACTGGCGATGCCCGCAAGGTGGTGATGAAAATGTCACAGTGAACCTTGACTCCACGCCCTATGTTTTTGACAATCAGTACTTCAAGGACTTGGTTGGTGGGAGAGGGTTCTTGAATTCTGATGAAACTCTTTATACGTTTGCTGAAACCAGACGGTATGTGAGGCTTTTTAGCAGAAATCAGAGCGCGTTTTTCAGGGCGTTTGTGGAGGGTATGCTGAAGATGGGTGATTTGCAGTCTGGCCGCCCGGGGGAAGTAAGAAGGAACTGTAGACTCGTCAACAGTCAATCTGTTGTCATATAG 978 51.84 MFPFFLLLLLLSFHFTSVSPATLRPDYYAKSCPEAESVVRSVMKKALFREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSFEVVDEVKEALEKVCPGIVSCADIIIMASRDAVALTGGPNWAVRLGRLDSLTASQEDSNQIMPSPRANASSLIDLFNNYNLSVKDLVALSGSHSIGQGRCFSVMFRLYNQSGTGRPDPAIEPSFREELYWRCPQGGDENVTVNLDSTPYVFDNQYFKDLVGGRGFLNSDETLYTFAETRRYVRLFSRNQSAFFRAFVEGMLKMGDLQSGRPGEVRRNCRLVNSQSVVI 325
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 4660666 4662924 - MC10g0562 Mch10g0676 677769
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0676 325 Gene3D Peroxidase, domain 2 160 300 - -
Mch10g0676 325 SUPERFAMILY Heme-dependent peroxidases 23 319 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PANTHER PEROXIDASE 72-RELATED 12 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Mch10g0676 325 FunFam Peroxidase 26 169 - -
Mch10g0676 325 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch10g0676 325 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0676 325 Gene3D - 26 319 - -
Mch10g0676 325 FunFam Peroxidase 160 300 - -
Mch10g0676 325 Pfam Peroxidase 39 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0676 Mch-Chr10:4660666 Mch1g1543 Mch-Chr1:16768075 4.84E-92 dispersed
Mch10g0676 Mch-Chr10:4660666 Mch10g0764 Mch-Chr10:5342204 9.92E-94 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0676 K00430 - csv:116406089 545.428