Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0703 ATGTCGGTCGCTAACGCCGACACACCTCCGGCCCTATCGGAGGCCTCGACGGTCGGGGACACGCACGCCCCCGACGTCGAGAAGAGCAGCAGCCCAACCGACAGGGCTCGCTGGGTGGCTAACCCACCGGAGCCGCCTGGTCTATGGCGCGAGCTTGTAGATTCTCTCCGAGACACCGTCTTTCCCGATCCGACCAAGCTTCTGATCTCCATCAAGAAGAAGACCGGAACTCCGCTGGTTGCTTCCGTTTTCCAGGCCTTCTTCCCAATCCTCTCCTGGGGTCGGAACTATAGCGCTATCAAGTTCAAAAACGACGTCTTGGCCGGTTTGACTCTTGCCAGCCTGTGCATTCCACAGAGTATTGGGTATGCAACTTTGGCGAAGCTTGAACCACAATATGGCCTGTATACGAGCATTGTGCCGCCGCTTGTTTACGCCGTTTTGGGAAGTTCAAGGGAAATAGCCATCGGTCCGGTGGCCATAGTTTCTCTGCTTCTGCCGGCGATGATCCAGAATCTCCAACATCCCGCCGCCACCGCCGATCCCGTTTCTTACACAACCCTTGTCCTCACCGCCACTTTCTTCGCCGGAATCTTTCAAGCCTCCTTCGGACTCCTCCGGCTGGGATTTTTGGTGGATTTTCTGTCACATGCAGCCATAGTTGGGTTCATGGGTGGAGCTGCCATTGTAATTGGGCTTCAACAGCTCAAAGGGCTTCTTGGGATCTCCCACTTCACAAACAAAACTGATATCATCTCTGTTTTGGGAGCTGTTTTTGGATCATTTCATCATCATCATTGGAATCCGTTGAACTTCATTATTGGCTCCTCATTCCTGTCCTTCATTCTCATCACCAGATTAGTGGGGAAGAAGTACAAGAAACTATTCTGGTTACCCGCCATAGCCCCACTCCTCTCTGTAATCTTCGCGACGCTCCTCGTCTTCCTCACCAGAGCCGATAACCATGGCGTCAACATCGTCAAACGCGTCCCCGCCGGCCTCAATCCCATCTCCGCCCATCGGATCCTCATCCACGGCCCTCTCCTCTCCCAAATCGCCAAGATCGGCCTCATCGTCGCCGTCGTCGCCCTCACGGAGGCAATCGCTGTCGGAAGATCCTTCGCGTCCATGAAAGGATACAACATCGACGGAAACAGAGAGATGGTGGCCCTAGGGTTCATGAATCTGGCTGGATCCCTAACTTCCTGCTACGCCGCAACCGGTTCGTTCTCGCGATCGGCGGTGAATTTCAGCGCCGGATGCGAGACGGCGGCGTCGAACATCGTGATGGCGATCACGGTGATGGTGTCGCTGGAGCTGTTCACAAAGCTGCTCTACTTCACTCCTAACGCCATTCTCGCTTCCATTATTCTCTCCGCTCTTCCAGGCCTCGTCGATCTCCACGAAGCTTACAATATTTGGAAGATCGATAAGCTCGATTTCTTCGCCCTCCTTGGAGCTTTCGTCGGAGTCCTGTTTTTTTCCGTCGAAATCGGCCTCCTGCTTTCGATTGTGATATCATTTGCGAAGATAATAGTGATCTCGATCAAACCTGGGGCAGAGATTTTGGGGAAAGTTCCTGGAACTGATAACTTCTGTGATGTTCATCAATATCCAATGGCTGTGAATACTCCTGGAGTTTTCATTGTTCGTGTTAAATCTGGCTTGCTTTGCTTTGCCAATGCCAACTTCGTCAAACATAGAATTCAGAGGTACATCAGCAGCCAAGAAGATGCCTCAACAAAGAGACCCATTCACTTCATAGTCATTGATCTCTCCAATTTGATGAACATTGACACTTCAGGAATTGCTTCTCTAGAAGAACTGCACAAAAGTTTGGCCGCCACTGGAATAGAGTTGGCCATTGCAAATCCAAAATGGCAAGTGATTCACAAGCTAAAGGTAGCAAATTTTGTTGCCAAGCTCAAGGGGAGGGTGTTCTTGAGTGTTGGGGAAGCTGTGGATTCATGCCTTTCAGCTAAAATGGGAGACATCTAA 1998 51.35 MSVANADTPPALSEASTVGDTHAPDVEKSSSPTDRARWVANPPEPPGLWRELVDSLRDTVFPDPTKLLISIKKKTGTPLVASVFQAFFPILSWGRNYSAIKFKNDVLAGLTLASLCIPQSIGYATLAKLEPQYGLYTSIVPPLVYAVLGSSREIAIGPVAIVSLLLPAMIQNLQHPAATADPVSYTTLVLTATFFAGIFQASFGLLRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGISHFTNKTDIISVLGAVFGSFHHHHWNPLNFIIGSSFLSFILITRLVGKKYKKLFWLPAIAPLLSVIFATLLVFLTRADNHGVNIVKRVPAGLNPISAHRILIHGPLLSQIAKIGLIVAVVALTEAIAVGRSFASMKGYNIDGNREMVALGFMNLAGSLTSCYAATGSFSRSAVNFSAGCETAASNIVMAITVMVSLELFTKLLYFTPNAILASIILSALPGLVDLHEAYNIWKIDKLDFFALLGAFVGVLFFSVEIGLLLSIVISFAKIIVISIKPGAEILGKVPGTDNFCDVHQYPMAVNTPGVFIVRVKSGLLCFANANFVKHRIQRYISSQEDASTKRPIHFIVIDLSNLMNIDTSGIASLEELHKSLAATGIELAIANPKWQVIHKLKVANFVAKLKGRVFLSVGEAVDSCLSAKMGDI 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4856867 4864664 + MC10g0587 Mch10g0703 677796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0703 665 CDD STAS_SulP_like_sulfate_transporter 538 648 - -
Mch10g0703 665 ProSitePatterns SLC26A transporters signature. 131 152 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Mch10g0703 665 MobiDBLite consensus disorder prediction 1 15 - -
Mch10g0703 665 Pfam Sulfate permease family 102 485 IPR011547 GO:0016020(InterPro)
Mch10g0703 665 MobiDBLite consensus disorder prediction 1 43 - -
Mch10g0703 665 Gene3D STAS domain 517 660 IPR036513 -
Mch10g0703 665 FunFam Sulfate transporter 31 517 660 - -
Mch10g0703 665 PANTHER SULFATE TRANSPORTER 78 658 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch10g0703 665 Pfam STAS domain 538 653 IPR002645 -
Mch10g0703 665 SUPERFAMILY SpoIIaa-like 545 657 IPR036513 -
Mch10g0703 665 ProSiteProfiles STAS domain profile. 554 657 IPR002645 -
Mch10g0703 665 NCBIfam sulfate permease 89 648 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0703 Mch-Chr10:4856867 Mch11g0790 Mch-Chr11:5322321 2.14E-218 dispersed
Mch10g0703 Mch-Chr10:4856867 Mch4g1713 Mch-Chr4:20250577 1.70E-269 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0703 K17469 - csv:116403192 1008.05