Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0732 ATGGCGTATATGTGCGCAGACAGTGGGAATCTAATGGCAATTGCCCAGCAAGTCATCAAGCAAAAGCAACAGCAGGAGCAGCAGCAGCACCATCAGCACCAGCACAATCGCCATCAACAGCAGCAGCACCCCTTTTCTCTTCTTCCTTGGACCAGTAATCCATCCCCATCAATGGCTTCTTCTTCCTCTGCTCCTAATTTGACCTTCGGGATTTCTGGCTCTGCCTTCTCTGACCCCTTTCAGGTCGCCGGACCGCCGGATTCTGCCGACCCGGCTTTTCACTTCCCCAATTTGGACCACCCCTCCGCCGGGTTTAGGTTCTTCCCTAATTTTGGCGGCGGCGGAGAGTTCGACTCCGATGACTGGGTGGACAGTTTGGTCGGCGGCGGAGACTCCACGGATAGCTCCAATCTGCCCTCTGCTTGCGACGCTTTTGGTGTGTATGGTGCGGATCCATTTAATGGCTCTCCGAGTCGACTCAGTGTCGCTTGCTCTCCGCCGTCCGAGTTCAACCGAGTTGTGCTCCCGGATTCTTCGTACAAGACGAGTAGCGTTCCGCAGCCGCAGCGCCCGGCGTGGAGTTCGCCTCCGCCGCCGTCTTCTCCACCGGCGGTTAAGGATGTTGGAGTAGTCAAGCCGCCGGCGGAGTGGCTGCAGAAGAACGATGCCGTCGAAGGCTCATCGAGTGCGGCGGAAACCGAGTCGCCGCCGCCGCTTCTAAAAGTCTTGCTTGATTGTGCGCGGCTGTCCGATTCCGAACCCGACCGAGCCGTGAAAACTCTTGATCGGATCAGTAAATCGCTGCGGGAAGATGGAGATCCGATTGAACGATTGGCGTTTTACTTCGAGGAGGCTCTTCGGAGCAGATTGTCCCCGACGGCGAGGAAGAATCGCTTGGATTCGAGTGAGAGCGACGCTAATTCCGAAGATTTCTTGCTCTCTTACAAAGCTCTGAACGACGCTTGTCCTTACTCCAAATTCGCCCATCTCACGGCGAATCAGGCGATACTGGAAGCTACAGAGAGAGCGAGTAAAATTCACATTGTCGACTTCGGAATCGTTCAGGGCGTTCAATGGGCGGCGCTCCTCCAGGCTTTGGCCACACGAGCCGCCGGAAAGCCTACCAGAGTTCGTATCTCCGGAATACCCGCGCCGTCGCTTGGAGATTCACCGGCGGCGTCTCTGTATGCGACTGGTAATAGACTTTCCGAGTTCGCGAAGCTTCTGGAACTGAATTTCGAGTTCGAACCGATTCTAACGCCGATTGAGGAGCTGAACAAATCGAGCTTCATCATCCAATCGGACGAGGTATTGACCGTCAATTTCATGCTTCAACTGTACAATCTTCTCGATGAGGTCCCGACTGGAGTTCATAACGCCCTCCGATTGGCGAAATCGCTGAGCCCTAAAATAGTGACTCTCGGCGAGTACGAGGCGAGTTTAAACCGAATCGGATTCTACAATCGCTTCAAGAACGCATTGAAATTCTACTCCGCCATTTTCGAATCGCTAGATCCAAACTTACCTCGAGACTCGCCGGAAAGACTCCAGTTAGAGAAACTGTTGCTCGGCCGTCGAATCGCCGGCGTGGTTGGAACCGAAGAAGAATCTGGAAGCAAAAGAAGAGTACGTATGGAAGACAAAGAACAGTGGAAGAACCTGATGGAAAGCTCCGGTTTCGAATCCGTAGCGCTCAGCCATTACGCCATTAGTCAGGCGAAAATACTTCTCTGGAACTACAATTACAGCTCCCTCTACACTCTAATCGAATCGGCGCCGGAGTTTCTGTCTCTGGCATGGAACGACGTTCCTCTCTTAACTGTATCTTCTTGG 1833 53.63 MAYMCADSGNLMAIAQQVIKQKQQQEQQQHHQHQHNRHQQQQHPFSLLPWTSNPSPSMASSSSAPNLTFGISGSAFSDPFQVAGPPDSADPAFHFPNLDHPSAGFRFFPNFGGGGEFDSDDWVDSLVGGGDSTDSSNLPSACDAFGVYGADPFNGSPSRLSVACSPPSEFNRVVLPDSSYKTSSVPQPQRPAWSSPPPPSSPPAVKDVGVVKPPAEWLQKNDAVEGSSSAAETESPPPLLKVLLDCARLSDSEPDRAVKTLDRISKSLREDGDPIERLAFYFEEALRSRLSPTARKNRLDSSESDANSEDFLLSYKALNDACPYSKFAHLTANQAILEATERASKIHIVDFGIVQGVQWAALLQALATRAAGKPTRVRISGIPAPSLGDSPAASLYATGNRLSEFAKLLELNFEFEPILTPIEELNKSSFIIQSDEVLTVNFMLQLYNLLDEVPTGVHNALRLAKSLSPKIVTLGEYEASLNRIGFYNRFKNALKFYSAIFESLDPNLPRDSPERLQLEKLLLGRRIAGVVGTEEESGSKRRVRMEDKEQWKNLMESSGFESVALSHYAISQAKILLWNYNYSSLYTLIESAPEFLSLAWNDVPLLTVSSW 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5046836 5048668 - MC10g0611 Mch10g0732 677825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0732 611 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 225 611 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Mch10g0732 611 Pfam GRAS domain family 240 611 IPR005202 -
Mch10g0732 611 MobiDBLite consensus disorder prediction 190 204 - -
Mch10g0732 611 ProSiteProfiles GRAS family profile. 230 611 IPR005202 -
Mch10g0732 611 MobiDBLite consensus disorder prediction 179 208 - -
Mch10g0732 611 MobiDBLite consensus disorder prediction 39 64 - -
Mch10g0732 611 MobiDBLite consensus disorder prediction 18 64 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0732 Mch-Chr10:5046836 Mch4g2611 Mch-Chr4:26368287 1.70E-56 dispersed
Mch10g0732 Mch-Chr10:5046836 Mch1g1496 Mch-Chr1:16458092 3.40E-253 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42460 PF03514 GRAS 2.00E-106 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0732 - - - 0.0