Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch10g0735 | ATGTTTCGTGCAGAGCTCATACTCTGTTTTCTCCCCTCTGTTTTAGCTCTGTTCCTCTTCCTCTTCCTAATACTCCTCAGAAGGCAGAGAAATGGCGTCGATCTTCCCCGCGGAACCATGGGCTGGCCGTTCCTCGGCGAAACTGTCGGCTATCTCCGCCCCTATTCCGCCACCACCATCGGCGATTTCATGGAGAATCACATCAAGAGATACGGCAAAGTCTACAAATCGAATCTGTTCGGAGAGCCGACGGTGGTGTCCGCCGACGCCGGCCTTAACCGCTACATCCTCCAGAATGAAGGGCGGCTGTTCGAGTGCAGTTACCCGCCGAGCATCGGCGGTATCCTCGGGAAGTGGTCGATGCTCGTTCTCGTCGGCGACATGCACCGAGACATGAGGATGATTTCGCTCAACTTCCTGAGCCAGAGCCGGCTCAAGACCCATCTATTGAAGGAGGTCGAGAATCAATCTCTGCTCGTGCTCCGTTCTTGGAAAGAATCTTCCATGTTTTTCGCTCGGGACGAAGCCAAAAAGTTCACTTTCAATTTAATGGCGAAGCACATCATGAGCTTGGATCCGGGGAAGTTGGAGACGGAGATGTTGAAGAAGGAATACCTGACTTTCATGAAAGGAGTGGTTTCTCCGCCGCTGAATCTGCCTGGAACGCCGTACAGAAGAGCTTTGAAGTCTCGAACGACGATCTTGAAGTTCATCGAGCGGAAAATGGAGGAACGGAAGCTGAAAATCGAAGCCGACGGCGGAGATTTCGAAGACGACGATCTGCTCGGCTGGGCATTGAAGCACTCAAATCTCTCGACGGAGCAAATCCTCGACCTGATTCTGAGCTTGCTGTTCGCCGGCCACGAGACGTCGTCGGTGGCGATAGCTTTGGCCATCTTCTTCCTCCCCGGCTGTCCTGCCGCCATCCAGCAGTTATCGGAAGAACACCTCGATATAGCCAGAGCCAATAAGCGATTGGGGAAGACGGAATTGGATTGGGAAGATTACAAGAAGATGGAATTCACCCAATGTGTCATTAACGAGACGCTTCGGCTTGGGAACGTGGTGAGATTTCTTCATAGAAAGGCACTTAAGGATGTGCGCTACAGAGGATACTTCATTCCACGTGGATGGAAAGTGCTTCCAGTAATTTCTGCAGCGCATTTGGATCCTTCAGTTTTTGACCAACCTCACCACTTTAATCCATGGAGGTGGCAGATGAATGAACTGCCATTGGGTAACTCGAGCACGATGACGACCAATAATTTTATGCCATTTGGCGGAGGACCAAGGCTGTGCACTGGTTCAGAACTAGCCAAGCTTGAAATGGCCATTTTCATCCACCATCTGGTCTTGAACTACCAATGGGAGTTGGCGGATTCAGATCAAGCTTTTGCTCACCCTTTTGTTGACTTCCCTAAAGGTCTGCCAATCAGAGTTCGCCACCGCCCTCTCGTGTAA | 1461 | 51.27 | MFRAELILCFLPSVLALFLFLFLILLRRQRNGVDLPRGTMGWPFLGETVGYLRPYSATTIGDFMENHIKRYGKVYKSNLFGEPTVVSADAGLNRYILQNEGRLFECSYPPSIGGILGKWSMLVLVGDMHRDMRMISLNFLSQSRLKTHLLKEVENQSLLVLRSWKESSMFFARDEAKKFTFNLMAKHIMSLDPGKLETEMLKKEYLTFMKGVVSPPLNLPGTPYRRALKSRTTILKFIERKMEERKLKIEADGGDFEDDDLLGWALKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLPGCPAAIQQLSEEHLDIARANKRLGKTELDWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYRGYFIPRGWKVLPVISAAHLDPSVFDQPHHFNPWRWQMNELPLGNSSTMTTNNFMPFGGGPRLCTGSELAKLEMAIFIHHLVLNYQWELADSDQAFAHPFVDFPKGLPIRVRHRPLV | 486 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 5077139 | 5081829 | + | MC10g0613 | Mch10g0735 | 677828 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch10g0735 | 486 | PRINTS | P450 superfamily signature | 286 | 303 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | PRINTS | P450 superfamily signature | 424 | 433 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | PRINTS | P450 superfamily signature | 433 | 444 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | PRINTS | P450 superfamily signature | 344 | 355 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | SUPERFAMILY | Cytochrome P450 | 29 | 483 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | CDD | CYP90-like | 67 | 480 | - | - | |
| Mch10g0735 | 486 | FunFam | Cytochrome P450 90B1 | 25 | 482 | - | - | |
| Mch10g0735 | 486 | PRINTS | E-class P450 group I signature | 383 | 407 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | PRINTS | E-class P450 group I signature | 423 | 433 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | PRINTS | E-class P450 group I signature | 433 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | PRINTS | E-class P450 group I signature | 275 | 292 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | PRINTS | E-class P450 group I signature | 343 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | PANTHER | CYTOCHROME P450 26 | 35 | 454 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Mch10g0735 | 486 | Pfam | Cytochrome P450 | 36 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0735 | 486 | Gene3D | Cytochrome P450 | 26 | 481 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g0735 | Mch-Chr10:5077139 | Mch9g1476 | Mch-Chr9:17187767 | 1.94E-119 | dispersed | |
| Mch10g0735 | Mch-Chr10:5077139 | Mch4g2178 | Mch-Chr4:23575704 | 5.32E-112 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch10g0735 | K09587 | - | csv:101211854 | 842.032 |